| Definition | Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008511 |
| Length | 299,762 |
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The map label for this gene is 116332577
Identifier: 116332577
GI number: 116332577
Start: 169693
End: 170853
Strand: Reverse
Name: 116332577
Synonym: LBJ_4149
Alternate gene names: NA
Gene position: 170853-169693 (Counterclockwise)
Preceding gene: 116332578
Following gene: 116332576
Centisome position: 57.0
GC content: 40.31
Gene sequence:
>1161_bases ATGAAAGAATACCTTGCATTTTTCAAAGACCCAAAATTCTGGATTCCGGTTTTAGTTTTGATTTTTTTAGAGACCGGAAT GCAATTTGGTTGTTACCGGCCTTTTTTAAAAAAGAATTCCTATGCAGCCAACGTCTTGAGAATTACGAATCACGTTCTTG ATAAACAAAAAGAATTTGATCCGGATGTTTTGGTTGTCGGGACATCGGTAGCCTATCAGGGTTTGTCCATTCCGATGTTA AACAGGGAACTTGCCCCTTTGGGTAAGAAGATTCAATCGATTGCGATTCCTGGAACGGAGCTGATCGTCCAAGACTTAGC TGTTTTGAAAACTCTTCCTCATTTCAAAAACGTAAAGACGGTGATTCACGTATTCGAAATTACGACTCCTTGGGTTGGCC AAAAATTTTTGAACTTACATACGCTTGCGATGATTTCCGAATTCAATCGTTCGGAAGTATATCCTAGAATTTACGATTTC GGTTACGATGTAAACGCGGACGATCTTATCTATATCACTTTGAAGTCGATCGCGTATAGAAGGGACATTCAGGATCTGAT TTTAAGTCCTTCTAAAAGAATCAAAGATATAGGGAAACGTTTTAAAACAGGGAATCATCATCCTTGGGACTACGAAAATT CTTATCGAGAAAAGATCAGTATGTATCCGATCGTAGACATTCCCGATTGTGTCGCAAAGACCGATCCTGCCAACGGTCTT CCGATTCCGGAAGGTTCGGATCGATTTCATAAAAAGGCGATCTTCGATACTTGTATCCTTGCAAGTAATCCATTGACCCA TGCGAATGAAGACGAAATCACAAAACAATACTTCGATCGACTCAAAATTCTGCACGATGAAATTCGAAGAATCGGAAAAG AGAACGGTCAAAACATTCGGATCGTCGGGGTTGTCGCACCTTATAGCCAACTCATTCAACGATGGAGGCTTCCGGGACGA AACGATGTTTGGAAAAGGGAACTTTCAAGAATCCATCCTTACGATCCGGTGCAGTTACTCGATTACCAGGATATTTTGGA CGGTCCGAATAACGGAGACTATTATTATGATTTGATTCACCTCAATTCGATCGGGATGCAAAAGTTGACGATTGCATTTG CAAAAGATTTGAAAGTCCTTTTAAAAGAGGAAAACAAGTGA
Upstream 100 bases:
>100_bases TTCATTCTATTCTTCCTTGCAAACGTCTTTATGCTTTTGGTTTTCGGTATTACGGAAAGCCAGAGTTTCCTCTACTTTGC GTTTTAGGAAAACATCCGTT
Downstream 100 bases:
>100_bases TCTTTACCTCTACTCTCTTTCTTCTGTTCTTTCTTTGTGTTTATGTACTTTATTGGGCTTACGACGGGAAGAATTATCGG GAATGGGTGATCGTAATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MKEYLAFFKDPKFWIPVLVLIFLETGMQFGCYRPFLKKNSYAANVLRITNHVLDKQKEFDPDVLVVGTSVAYQGLSIPML NRELAPLGKKIQSIAIPGTELIVQDLAVLKTLPHFKNVKTVIHVFEITTPWVGQKFLNLHTLAMISEFNRSEVYPRIYDF GYDVNADDLIYITLKSIAYRRDIQDLILSPSKRIKDIGKRFKTGNHHPWDYENSYREKISMYPIVDIPDCVAKTDPANGL PIPEGSDRFHKKAIFDTCILASNPLTHANEDEITKQYFDRLKILHDEIRRIGKENGQNIRIVGVVAPYSQLIQRWRLPGR NDVWKRELSRIHPYDPVQLLDYQDILDGPNNGDYYYDLIHLNSIGMQKLTIAFAKDLKVLLKEENK
Sequences:
>Translated_386_residues MKEYLAFFKDPKFWIPVLVLIFLETGMQFGCYRPFLKKNSYAANVLRITNHVLDKQKEFDPDVLVVGTSVAYQGLSIPML NRELAPLGKKIQSIAIPGTELIVQDLAVLKTLPHFKNVKTVIHVFEITTPWVGQKFLNLHTLAMISEFNRSEVYPRIYDF GYDVNADDLIYITLKSIAYRRDIQDLILSPSKRIKDIGKRFKTGNHHPWDYENSYREKISMYPIVDIPDCVAKTDPANGL PIPEGSDRFHKKAIFDTCILASNPLTHANEDEITKQYFDRLKILHDEIRRIGKENGQNIRIVGVVAPYSQLIQRWRLPGR NDVWKRELSRIHPYDPVQLLDYQDILDGPNNGDYYYDLIHLNSIGMQKLTIAFAKDLKVLLKEENK >Mature_386_residues MKEYLAFFKDPKFWIPVLVLIFLETGMQFGCYRPFLKKNSYAANVLRITNHVLDKQKEFDPDVLVVGTSVAYQGLSIPML NRELAPLGKKIQSIAIPGTELIVQDLAVLKTLPHFKNVKTVIHVFEITTPWVGQKFLNLHTLAMISEFNRSEVYPRIYDF GYDVNADDLIYITLKSIAYRRDIQDLILSPSKRIKDIGKRFKTGNHHPWDYENSYREKISMYPIVDIPDCVAKTDPANGL PIPEGSDRFHKKAIFDTCILASNPLTHANEDEITKQYFDRLKILHDEIRRIGKENGQNIRIVGVVAPYSQLIQRWRLPGR NDVWKRELSRIHPYDPVQLLDYQDILDGPNNGDYYYDLIHLNSIGMQKLTIAFAKDLKVLLKEENK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44692; Mature: 44692
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEYLAFFKDPKFWIPVLVLIFLETGMQFGCYRPFLKKNSYAANVLRITNHVLDKQKEFD CCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCC PDVLVVGTSVAYQGLSIPMLNRELAPLGKKIQSIAIPGTELIVQDLAVLKTLPHFKNVKT CCEEEEECHHHHCCCCCCHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHH VIHVFEITTPWVGQKFLNLHTLAMISEFNRSEVYPRIYDFGYDVNADDLIYITLKSIAYR HHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHCCCHHHHCCCCCCCCCEEEEEHHHHHHH RDIQDLILSPSKRIKDIGKRFKTGNHHPWDYENSYREKISMYPIVDIPDCVAKTDPANGL HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCC PIPEGSDRFHKKAIFDTCILASNPLTHANEDEITKQYFDRLKILHDEIRRIGKENGQNIR CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE IVGVVAPYSQLIQRWRLPGRNDVWKRELSRIHPYDPVQLLDYQDILDGPNNGDYYYDLIH EEEEECCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHCCHHHHHCCCCCCCEEEEEEE LNSIGMQKLTIAFAKDLKVLLKEENK ECCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKEYLAFFKDPKFWIPVLVLIFLETGMQFGCYRPFLKKNSYAANVLRITNHVLDKQKEFD CCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCC PDVLVVGTSVAYQGLSIPMLNRELAPLGKKIQSIAIPGTELIVQDLAVLKTLPHFKNVKT CCEEEEECHHHHCCCCCCHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHH VIHVFEITTPWVGQKFLNLHTLAMISEFNRSEVYPRIYDFGYDVNADDLIYITLKSIAYR HHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHCCCHHHHCCCCCCCCCEEEEEHHHHHHH RDIQDLILSPSKRIKDIGKRFKTGNHHPWDYENSYREKISMYPIVDIPDCVAKTDPANGL HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCC PIPEGSDRFHKKAIFDTCILASNPLTHANEDEITKQYFDRLKILHDEIRRIGKENGQNIR CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE IVGVVAPYSQLIQRWRLPGRNDVWKRELSRIHPYDPVQLLDYQDILDGPNNGDYYYDLIH EEEEECCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHCCHHHHHCCCCCCCEEEEEEE LNSIGMQKLTIAFAKDLKVLLKEENK ECCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA