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The map label for this gene is ypjD [H]

Identifier: 116332574

GI number: 116332574

Start: 166878

End: 167222

Strand: Reverse

Name: ypjD [H]

Synonym: LBJ_4146

Alternate gene names: 116332574

Gene position: 167222-166878 (Counterclockwise)

Preceding gene: 116332575

Following gene: 116332571

Centisome position: 55.78

GC content: 42.32

Gene sequence:

>345_bases
ATGAATGAAAACGAACTGTCTCTTAGCCAGGCTCAGAAGAAAGTGGACGAGTGGATTTCCGATTTCGGGGTTCGGTATTT
TTCGGAACTTACGAATCTTGCGATTCTTATGGAAGAGGTGGGAGAATTTGCGAGGTTGGTGGCGAGAAAATACGGGGACC
AATCTTTTAAGAAGGGAGAGGATCCGGAAGGAATTTCCAAAGAAATTGGGGATATTCTTTTTGTCCTGATATGTCTTGCA
AACCAAATGGGAATTTCCCTGGAAGATGCGTTACGTGCCACTTTGAAGAAAAATACTGAAAGAGATAAGGATCGTCACAA
AGAAAATCCGAAACTTCGGTTCTAA

Upstream 100 bases:

>100_bases
CCGAAGTGAAATGTAGAAAATACATTGATCCTCATCATTTAAGCGGGGGTTGTTATCCCGAACCGACGGCAATCTTGATT
GATCGATTGGATCTACAAAG

Downstream 100 bases:

>100_bases
TACTCTTTTTTGATTGCGAGATGAAGTTCTTTCAGGTTTGAGCTTTTTAGACTGTTTAATACGAATACGAACTTCCCATA
ACTGATATCTTTGTCTCCGT

Product: pyrophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MNENELSLSQAQKKVDEWISDFGVRYFSELTNLAILMEEVGEFARLVARKYGDQSFKKGEDPEGISKEIGDILFVLICLA
NQMGISLEDALRATLKKNTERDKDRHKENPKLRF

Sequences:

>Translated_114_residues
MNENELSLSQAQKKVDEWISDFGVRYFSELTNLAILMEEVGEFARLVARKYGDQSFKKGEDPEGISKEIGDILFVLICLA
NQMGISLEDALRATLKKNTERDKDRHKENPKLRF
>Mature_114_residues
MNENELSLSQAQKKVDEWISDFGVRYFSELTNLAILMEEVGEFARLVARKYGDQSFKKGEDPEGISKEIGDILFVLICLA
NQMGISLEDALRATLKKNTERDKDRHKENPKLRF

Specific function: Unknown

COG id: COG1694

COG function: function code R; Predicted pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012359
- InterPro:   IPR004518 [H]

Pfam domain/function: PF03819 MazG [H]

EC number: NA

Molecular weight: Translated: 13110; Mature: 13110

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNENELSLSQAQKKVDEWISDFGVRYFSELTNLAILMEEVGEFARLVARKYGDQSFKKGE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC
DPEGISKEIGDILFVLICLANQMGISLEDALRATLKKNTERDKDRHKENPKLRF
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNENELSLSQAQKKVDEWISDFGVRYFSELTNLAILMEEVGEFARLVARKYGDQSFKKGE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC
DPEGISKEIGDILFVLICLANQMGISLEDALRATLKKNTERDKDRHKENPKLRF
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]