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The map label for this gene is exbB [H]

Identifier: 116332553

GI number: 116332553

Start: 137322

End: 137936

Strand: Reverse

Name: exbB [H]

Synonym: LBJ_4119

Alternate gene names: 116332553

Gene position: 137936-137322 (Counterclockwise)

Preceding gene: 116332554

Following gene: 116332552

Centisome position: 46.02

GC content: 40.33

Gene sequence:

>615_bases
ATGACTATGTTTTTAGTTGAATACGGCGAGACGTTCATTTTTATTGTCATGCTCGTAGCCAGCATTATCGCTCTTGCAGT
AGGAACAGAAAGAATTCTAATTTTTCGCAGAAATCTTAGAAATACCGACGTAGTTTTGCCTATCTTAACCTCTGAAATTA
GAAAAGGCGATTTTGGGGCCATAAAAACCGTAGCAAGTGAACACCCTACAAATATATATGCAAAGTTTTCCCAGTTTTCC
ACGGAAAATTACGAAGTCGGGCATGAAGCCCTCGCAGAATTGCAAGAAGGCAAAATCATAGGAGAAAGAGTTGAGCTCGA
AAACCATCTTCCCATTTTAAACACTTTAGGAAATAACGCACCTTTTATTGGCCTACTGGGAACGGTGCTTGGTGTGATCA
AAGCCTTCTACGGACTAGGAACGTTAGGAAGTACTGGAGCTGAATTCGTAATGAGAAGTATCTCTACAGCCCTTCTTGCA
ACCGCCGCTGGATTAGGAGTTGCAATTCCGGTCGTAATGGCGAATAACTATTTTACTCGTAAATTAAAGGTCATTCAGGC
AAATTTGGAAATTCTTTCCAAAGAGTTTCTTGCAAGTCTTTCCCGTAAGAAATAA

Upstream 100 bases:

>100_bases
GTGAGTATTTCCGGGGAATAAAAAATATTGTTTTAAAGAGAACAATTACAGTTTGAATCTTAATGGTTTTATAAAATAAA
GTATATTAGAGGATCCAATT

Downstream 100 bases:

>100_bases
ACTTATAAGGAGAAGGTAAAACATGGCAGGTTCTGCTCCCTCCGGCGACGGAGAAGAAATAGGTAATATTAATATCACTC
CGATGGTGGATGTGATTCTA

Product: TolQ-like transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MTMFLVEYGETFIFIVMLVASIIALAVGTERILIFRRNLRNTDVVLPILTSEIRKGDFGAIKTVASEHPTNIYAKFSQFS
TENYEVGHEALAELQEGKIIGERVELENHLPILNTLGNNAPFIGLLGTVLGVIKAFYGLGTLGSTGAEFVMRSISTALLA
TAAGLGVAIPVVMANNYFTRKLKVIQANLEILSKEFLASLSRKK

Sequences:

>Translated_204_residues
MTMFLVEYGETFIFIVMLVASIIALAVGTERILIFRRNLRNTDVVLPILTSEIRKGDFGAIKTVASEHPTNIYAKFSQFS
TENYEVGHEALAELQEGKIIGERVELENHLPILNTLGNNAPFIGLLGTVLGVIKAFYGLGTLGSTGAEFVMRSISTALLA
TAAGLGVAIPVVMANNYFTRKLKVIQANLEILSKEFLASLSRKK
>Mature_203_residues
TMFLVEYGETFIFIVMLVASIIALAVGTERILIFRRNLRNTDVVLPILTSEIRKGDFGAIKTVASEHPTNIYAKFSQFST
ENYEVGHEALAELQEGKIIGERVELENHLPILNTLGNNAPFIGLLGTVLGVIKAFYGLGTLGSTGAEFVMRSISTALLAT
AAGLGVAIPVVMANNYFTRKLKVIQANLEILSKEFLASLSRKK

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

Organism=Escherichia coli, GI1786958, Length=98, Percent_Identity=41.8367346938776, Blast_Score=80, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898
- InterPro:   IPR014163 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 22249; Mature: 22118

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMFLVEYGETFIFIVMLVASIIALAVGTERILIFRRNLRNTDVVLPILTSEIRKGDFGA
CEEEEEECCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCEEHHHHHHHHCCCCCHH
IKTVASEHPTNIYAKFSQFSTENYEVGHEALAELQEGKIIGERVELENHLPILNTLGNNA
HHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEHHHHHHCCCCCHHHHCCCCC
PFIGLLGTVLGVIKAFYGLGTLGSTGAEFVMRSISTALLATAAGLGVAIPVVMANNYFTR
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHH
KLKVIQANLEILSKEFLASLSRKK
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TMFLVEYGETFIFIVMLVASIIALAVGTERILIFRRNLRNTDVVLPILTSEIRKGDFGA
EEEEEECCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCEEHHHHHHHHCCCCCHH
IKTVASEHPTNIYAKFSQFSTENYEVGHEALAELQEGKIIGERVELENHLPILNTLGNNA
HHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEHHHHHHCCCCCHHHHCCCCC
PFIGLLGTVLGVIKAFYGLGTLGSTGAEFVMRSISTALLATAAGLGVAIPVVMANNYFTR
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHH
KLKVIQANLEILSKEFLASLSRKK
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]