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The map label for this gene is tnhA [H]

Identifier: 116332538

GI number: 116332538

Start: 119093

End: 120187

Strand: Reverse

Name: tnhA [H]

Synonym: LBJ_4103

Alternate gene names: 116332538

Gene position: 120187-119093 (Counterclockwise)

Preceding gene: 116332539

Following gene: 116332535

Centisome position: 40.09

GC content: 39.0

Gene sequence:

>1095_bases
ATGAAAAGAAAAGTATATGTAGGAATGGATGTCCACAAAGAAACGATCCAAATCGCGTATTTAACGAGCAATTCAAAGGA
AATATTGAAAGAACAACAGATAAAACACAATGAAGTTCAAATCAAAAAGTTCATCAAAAAACTCAAAACAGAATGGAACG
AGATATATTGTTGTTACGAGGCAGGAGTAACCGGTTATCCACTTTACAGATATCTAAAGTCATTGAGAGTGAACTGTATC
CTTGTAGCGCCCGGAAAGATTCCAAGACAAAATACCGATAAGATCAAAACGGATAAAAGAGACGCGATCAAATTAGCGAG
ATTAATGCGAAGTGGAGAATTGGAATCGATTCATGTTCCCAGTGAAGAGGACGAAGCAGTAAGAGATTATTTAAGATCCC
GTGACAGTCTTCGTTTGGATTTAGGAAGGAATCGTCAAAGGTTGATGAAATTCTTATTAAGAAAAGACATAAAGTATTCC
ACAACGAAGTATTGGACGGTGAGTCATTACAAATGGTTGAACAATCTTCACTTTAACAACGAGATCCTTCAAGAGACGTT
TAACGATTATTATAGTCGAGTGAGAGTTCAAGAAGAGAATCTAAAATCCATGGATAAAAAGATACAAGAGATAGCGGAAA
GTGAACCGTATCGAGAGAAAGTGGGAATCTTAAGATGCTTTCGAGGAGTGGACTATTTAACGGCAATGTTCTTACTTTGT
GAGGTAAACGACTTCAAGCGATTCAAAACGGCCGGTTCGTTCATGAGTTTTCTTGGACTTGTTCCTGGAGAATATTCCAG
CGGTTCCAAAAGAAAACAAACAGGGATTACTAAAACTGGAAGTCCCAGACTTAGAAGGATTTTGACGGAAGCGGCTTGGC
AACATCGCTTCCCTGGAACAGGAAGTAAAATCATAACCGCACGTAGATCGGGACAACCTGCATTAGTCGTTGCTTTATCG
GAAAAAGCTTCTCTCAGGTTACACAAGAAATTTCGCAATCTACAGCTAAGAGGAAAAACTCCTCAAGTGATGATAACGGC
AGTTTCAAGAGAGTTATCCGGATTTCTTTGGGCGGCAATGAATCTTGTAGCCTAA

Upstream 100 bases:

>100_bases
CAACGGAACTTAGACAAAATGGCGCCCCTTCTGGGCTTGAAAAACGTGGGTTAGATGCGAGCATTTACCACAAAACAAAA
AAACCAACAGAAGGAACGCA

Downstream 100 bases:

>100_bases
AGTTAGAGTAATGTTCATCCAATAATTGAATTCGTTAGAGAAGATGTACGATAAAGGAAGAATACTTGTTGGCGAGAGTG
TTGAAGCAAATTTGAATTTC

Product: transposase IS1533

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKRKVYVGMDVHKETIQIAYLTSNSKEILKEQQIKHNEVQIKKFIKKLKTEWNEIYCCYEAGVTGYPLYRYLKSLRVNCI
LVAPGKIPRQNTDKIKTDKRDAIKLARLMRSGELESIHVPSEEDEAVRDYLRSRDSLRLDLGRNRQRLMKFLLRKDIKYS
TTKYWTVSHYKWLNNLHFNNEILQETFNDYYSRVRVQEENLKSMDKKIQEIAESEPYREKVGILRCFRGVDYLTAMFLLC
EVNDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRLRRILTEAAWQHRFPGTGSKIITARRSGQPALVVALS
EKASLRLHKKFRNLQLRGKTPQVMITAVSRELSGFLWAAMNLVA

Sequences:

>Translated_364_residues
MKRKVYVGMDVHKETIQIAYLTSNSKEILKEQQIKHNEVQIKKFIKKLKTEWNEIYCCYEAGVTGYPLYRYLKSLRVNCI
LVAPGKIPRQNTDKIKTDKRDAIKLARLMRSGELESIHVPSEEDEAVRDYLRSRDSLRLDLGRNRQRLMKFLLRKDIKYS
TTKYWTVSHYKWLNNLHFNNEILQETFNDYYSRVRVQEENLKSMDKKIQEIAESEPYREKVGILRCFRGVDYLTAMFLLC
EVNDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRLRRILTEAAWQHRFPGTGSKIITARRSGQPALVVALS
EKASLRLHKKFRNLQLRGKTPQVMITAVSRELSGFLWAAMNLVA
>Mature_364_residues
MKRKVYVGMDVHKETIQIAYLTSNSKEILKEQQIKHNEVQIKKFIKKLKTEWNEIYCCYEAGVTGYPLYRYLKSLRVNCI
LVAPGKIPRQNTDKIKTDKRDAIKLARLMRSGELESIHVPSEEDEAVRDYLRSRDSLRLDLGRNRQRLMKFLLRKDIKYS
TTKYWTVSHYKWLNNLHFNNEILQETFNDYYSRVRVQEENLKSMDKKIQEIAESEPYREKVGILRCFRGVDYLTAMFLLC
EVNDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRLRRILTEAAWQHRFPGTGSKIITARRSGQPALVVALS
EKASLRLHKKFRNLQLRGKTPQVMITAVSRELSGFLWAAMNLVA

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42448; Mature: 42448

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKVYVGMDVHKETIQIAYLTSNSKEILKEQQIKHNEVQIKKFIKKLKTEWNEIYCCYE
CCCEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEE
AGVTGYPLYRYLKSLRVNCILVAPGKIPRQNTDKIKTDKRDAIKLARLMRSGELESIHVP
CCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECC
SEEDEAVRDYLRSRDSLRLDLGRNRQRLMKFLLRKDIKYSTTKYWTVSHYKWLNNLHFNN
CCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCCH
EILQETFNDYYSRVRVQEENLKSMDKKIQEIAESEPYREKVGILRCFRGVDYLTAMFLLC
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EVNDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRLRRILTEAAWQHRFPGT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCC
GSKIITARRSGQPALVVALSEKASLRLHKKFRNLQLRGKTPQVMITAVSRELSGFLWAAM
CCEEEEEECCCCCEEEEEECCCHHHHHHHHHHCCEECCCCCEEEHHHHHHHHHHHHHHHH
NLVA
HHCC
>Mature Secondary Structure
MKRKVYVGMDVHKETIQIAYLTSNSKEILKEQQIKHNEVQIKKFIKKLKTEWNEIYCCYE
CCCEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEE
AGVTGYPLYRYLKSLRVNCILVAPGKIPRQNTDKIKTDKRDAIKLARLMRSGELESIHVP
CCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECC
SEEDEAVRDYLRSRDSLRLDLGRNRQRLMKFLLRKDIKYSTTKYWTVSHYKWLNNLHFNN
CCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCCH
EILQETFNDYYSRVRVQEENLKSMDKKIQEIAESEPYREKVGILRCFRGVDYLTAMFLLC
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EVNDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRLRRILTEAAWQHRFPGT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCC
GSKIITARRSGQPALVVALSEKASLRLHKKFRNLQLRGKTPQVMITAVSRELSGFLWAAM
CCEEEEEECCCCCEEEEEECCCHHHHHHHHHHCCEECCCCCEEEHHHHHHHHHHHHHHHH
NLVA
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8171119 [H]