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The map label for this gene is 116332534

Identifier: 116332534

GI number: 116332534

Start: 112893

End: 114614

Strand: Reverse

Name: 116332534

Synonym: LBJ_4098

Alternate gene names: NA

Gene position: 114614-112893 (Counterclockwise)

Preceding gene: 116332535

Following gene: 116332532

Centisome position: 38.23

GC content: 40.3

Gene sequence:

>1722_bases
TTGTCTAAACTTCACTTCTCTATTCAAGAATATCAACTTACTGGACATTATCTTCAAGTGGAATTGGAGATAATGTCCCC
CCGAAAAGAAATCACTCTTTCTCTTCCCGTTTGGTCCCCCGGATCCTATATGGTTCGGGATTACTCCAGACATATCCATA
AACTCGAAGTCTCCGCTTTAGGGAAGAATAGAAAACGTCCGGAAGTTTCGCAAATTGATCTCGATTCCTGGAGCGTCCTT
TGTGAGGGGACACCGTTTCTCATACGTTATGTGGTTTATGGTTACGATTATTCGGTTCGTTCCAATTATTTTACGACCGA
GTTTTGCCTTTTGCACCCGCCCGCCTTGTTCTTATATCCGAAAGACGAAAAAGTTTCCGAAATCACATTAGAGATTTCGA
ATTCCCTTCCCTTTAAATTTTGTCACTCGGGTTTGGACGGCAAAGGGAAAAAACGTTTTTCCAAAAATCTGGACGAATTC
TTGGATGCTCCCATTCTTTTATCCAACCGCGCGGCCATTCCGTTTCATGCGGGAGAATGTGTTCACGAAATCGTACTCGA
AGGAGAATTATCCAAATCTGTTCAGAAAACCCTGATCCCGGATTTACAAAAAATTACGGAAGAACAAATCCGTTCTTTCG
CCGGCTCGCCGAATAACCGCTATCTATTTATTCTAATCTTATCCGAAGGGGCTTACGGAGGTTTGGAACATCTCAATTCT
TCCGTAAATATGTACGATCCTTTGAAGGCGATTTCAAAAGACGGATACCTAAAACTTTTGGAACTTTTATCCCACGAATA
CTTTCATCTCTGGAACGTAAAGCGCATTCGTCCCATTGCATTAGGCCCTTTCGATTATCAAAAGCCGAATTTAACAAGAG
AGTTATGGATAGCGGAAGGAATCACTTCTTTTTACGACGCATATTTTTTAGTCAAAACCAAACATCTCAACGCGGAATTG
TATCTTGCAAAAGTAATGGAAGATTTACTGAGTCTGGAAAAATCGGAAGGCGAATCTTGGATGAGTCTTGAAGATTCTTC
GTTTACGGCTTGGACCAAATTTTATAATCGCCCGAACGATCCGAACGCGAATAACACTGGAGTTTCCTACTACGTCAAAG
GAAGTATTTTAGCTCTGGCCATGAATCTTCACCTTTTGTCCGAATCCTCAGGCGATCATTCTCTTTTAGATGTGATGAAC
GAAGTTTATCAAACCTTCCATTTAGGAAAAAATCGGGGGTTTACAAAAATCGAGTTCTTTGAAGCGGCAAAAAAACGTAC
CGGAATCGATTTAAAATCAGAATTCGGCGATTATCTCGACAAACCGATTCCGATTCCGATTGAAAAATACTTTCACAAAA
TCGGCGTTAGACGATCCGATTCGAATCCGGAAGTAGAACTCGGTTTCGGAACCAGGGAAGATAAAGGAAATCTCATCATT
CATAAGATCGATTGGAAATTTTTAGATCCCTCTATGGATCTGAGTCAAGGAGACGAGTGGATCGCATTGAACGGAACTCG
AATTCATTCCGGAAATCGAAAGAATCTTTTGAAACAATTTAGGGCGGGTGAAAAAGTGGAACTTTTGATCTCAAGAAAAG
GGAAAATCCTCAAAAGGAAAATGAAACTTTCCAAACGATTTCAAACGAGCCAATTTAAATTCGAAGAACAAATATCCGAG
AAGCAAAAAAGATTACGTAATCTTTTTTTCGGAATAAAGTAA

Upstream 100 bases:

>100_bases
TTCTCCGAATGGAAAGATTCAAAAGGTTTGGAGAAAAGTTGACCCGACGACTACGGTGGAAGAAACTCTCCAAGAGATTT
CCAAAGTTAGCGGTACATGA

Downstream 100 bases:

>100_bases
CGTAAAATCCTTAGAGCGACGCACTTTAGTTTTCTGCTTTATCAGAAAGATCAAGCGGTAACTAAAGCGTCTCGCTTCTA
TTGGCGCTCGACGGGTTCTT

Product: protease

Products: NA

Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; M61 Family Glycyl Aminopeptidase; Pdz/Dhr/Glgf; M61 Glycyl Aminopeptidase; Aminopeptidase N Family Protein; Metallopeptidase; PDZ Domain-Containing Protein; Trypsin-Like Serine Protease; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; PDZ Domain Protein; Glycyl Aminopeptidase; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein

Number of amino acids: Translated: 573; Mature: 572

Protein sequence:

>573_residues
MSKLHFSIQEYQLTGHYLQVELEIMSPRKEITLSLPVWSPGSYMVRDYSRHIHKLEVSALGKNRKRPEVSQIDLDSWSVL
CEGTPFLIRYVVYGYDYSVRSNYFTTEFCLLHPPALFLYPKDEKVSEITLEISNSLPFKFCHSGLDGKGKKRFSKNLDEF
LDAPILLSNRAAIPFHAGECVHEIVLEGELSKSVQKTLIPDLQKITEEQIRSFAGSPNNRYLFILILSEGAYGGLEHLNS
SVNMYDPLKAISKDGYLKLLELLSHEYFHLWNVKRIRPIALGPFDYQKPNLTRELWIAEGITSFYDAYFLVKTKHLNAEL
YLAKVMEDLLSLEKSEGESWMSLEDSSFTAWTKFYNRPNDPNANNTGVSYYVKGSILALAMNLHLLSESSGDHSLLDVMN
EVYQTFHLGKNRGFTKIEFFEAAKKRTGIDLKSEFGDYLDKPIPIPIEKYFHKIGVRRSDSNPEVELGFGTREDKGNLII
HKIDWKFLDPSMDLSQGDEWIALNGTRIHSGNRKNLLKQFRAGEKVELLISRKGKILKRKMKLSKRFQTSQFKFEEQISE
KQKRLRNLFFGIK

Sequences:

>Translated_573_residues
MSKLHFSIQEYQLTGHYLQVELEIMSPRKEITLSLPVWSPGSYMVRDYSRHIHKLEVSALGKNRKRPEVSQIDLDSWSVL
CEGTPFLIRYVVYGYDYSVRSNYFTTEFCLLHPPALFLYPKDEKVSEITLEISNSLPFKFCHSGLDGKGKKRFSKNLDEF
LDAPILLSNRAAIPFHAGECVHEIVLEGELSKSVQKTLIPDLQKITEEQIRSFAGSPNNRYLFILILSEGAYGGLEHLNS
SVNMYDPLKAISKDGYLKLLELLSHEYFHLWNVKRIRPIALGPFDYQKPNLTRELWIAEGITSFYDAYFLVKTKHLNAEL
YLAKVMEDLLSLEKSEGESWMSLEDSSFTAWTKFYNRPNDPNANNTGVSYYVKGSILALAMNLHLLSESSGDHSLLDVMN
EVYQTFHLGKNRGFTKIEFFEAAKKRTGIDLKSEFGDYLDKPIPIPIEKYFHKIGVRRSDSNPEVELGFGTREDKGNLII
HKIDWKFLDPSMDLSQGDEWIALNGTRIHSGNRKNLLKQFRAGEKVELLISRKGKILKRKMKLSKRFQTSQFKFEEQISE
KQKRLRNLFFGIK
>Mature_572_residues
SKLHFSIQEYQLTGHYLQVELEIMSPRKEITLSLPVWSPGSYMVRDYSRHIHKLEVSALGKNRKRPEVSQIDLDSWSVLC
EGTPFLIRYVVYGYDYSVRSNYFTTEFCLLHPPALFLYPKDEKVSEITLEISNSLPFKFCHSGLDGKGKKRFSKNLDEFL
DAPILLSNRAAIPFHAGECVHEIVLEGELSKSVQKTLIPDLQKITEEQIRSFAGSPNNRYLFILILSEGAYGGLEHLNSS
VNMYDPLKAISKDGYLKLLELLSHEYFHLWNVKRIRPIALGPFDYQKPNLTRELWIAEGITSFYDAYFLVKTKHLNAELY
LAKVMEDLLSLEKSEGESWMSLEDSSFTAWTKFYNRPNDPNANNTGVSYYVKGSILALAMNLHLLSESSGDHSLLDVMNE
VYQTFHLGKNRGFTKIEFFEAAKKRTGIDLKSEFGDYLDKPIPIPIEKYFHKIGVRRSDSNPEVELGFGTREDKGNLIIH
KIDWKFLDPSMDLSQGDEWIALNGTRIHSGNRKNLLKQFRAGEKVELLISRKGKILKRKMKLSKRFQTSQFKFEEQISEK
QKRLRNLFFGIK

Specific function: Unknown

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66147; Mature: 66016

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLHFSIQEYQLTGHYLQVELEIMSPRKEITLSLPVWSPGSYMVRDYSRHIHKLEVSAL
CCCEEEEEEEEEEECEEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHEEEHHHH
GKNRKRPEVSQIDLDSWSVLCEGTPFLIRYVVYGYDYSVRSNYFTTEFCLLHPPALFLYP
CCCCCCCCCCEECCCCCEEEECCCHHHHHHHHHCCCEEECCCCEEEEEEEECCCEEEEEC
KDEKVSEITLEISNSLPFKFCHSGLDGKGKKRFSKNLDEFLDAPILLSNRAAIPFHAGEC
CCCCCEEEEEEECCCCCHHHHHCCCCCCCHHHHHHCHHHHCCCCEEECCCCCCCCCHHHH
VHEIVLEGELSKSVQKTLIPDLQKITEEQIRSFAGSPNNRYLFILILSEGAYGGLEHLNS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHCC
SVNMYDPLKAISKDGYLKLLELLSHEYFHLWNVKRIRPIALGPFDYQKPNLTRELWIAEG
CCCCCCHHHHHCCCCHHHHHHHHCCCCEEEECCCEECEEEECCCCCCCCCCHHHHHHHHH
ITSFYDAYFLVKTKHLNAELYLAKVMEDLLSLEKSEGESWMSLEDSSFTAWTKFYNRPND
HHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCCCC
PNANNTGVSYYVKGSILALAMNLHLLSESSGDHSLLDVMNEVYQTFHLGKNRGFTKIEFF
CCCCCCCEEEEECCCEEEHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHH
EAAKKRTGIDLKSEFGDYLDKPIPIPIEKYFHKIGVRRSDSNPEVELGFGTREDKGNLII
HHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCEECCCCCCEEEECCCCCCCCCEEE
HKIDWKFLDPSMDLSQGDEWIALNGTRIHSGNRKNLLKQFRAGEKVELLISRKGKILKRK
EEECCEEECCCCCCCCCCCEEEECCEEEECCCHHHHHHHHCCCCEEEEEECCCCHHHHHH
MKLSKRFQTSQFKFEEQISEKQKRLRNLFFGIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SKLHFSIQEYQLTGHYLQVELEIMSPRKEITLSLPVWSPGSYMVRDYSRHIHKLEVSAL
CCEEEEEEEEEEECEEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHEEEHHHH
GKNRKRPEVSQIDLDSWSVLCEGTPFLIRYVVYGYDYSVRSNYFTTEFCLLHPPALFLYP
CCCCCCCCCCEECCCCCEEEECCCHHHHHHHHHCCCEEECCCCEEEEEEEECCCEEEEEC
KDEKVSEITLEISNSLPFKFCHSGLDGKGKKRFSKNLDEFLDAPILLSNRAAIPFHAGEC
CCCCCEEEEEEECCCCCHHHHHCCCCCCCHHHHHHCHHHHCCCCEEECCCCCCCCCHHHH
VHEIVLEGELSKSVQKTLIPDLQKITEEQIRSFAGSPNNRYLFILILSEGAYGGLEHLNS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHCC
SVNMYDPLKAISKDGYLKLLELLSHEYFHLWNVKRIRPIALGPFDYQKPNLTRELWIAEG
CCCCCCHHHHHCCCCHHHHHHHHCCCCEEEECCCEECEEEECCCCCCCCCCHHHHHHHHH
ITSFYDAYFLVKTKHLNAELYLAKVMEDLLSLEKSEGESWMSLEDSSFTAWTKFYNRPND
HHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCCCC
PNANNTGVSYYVKGSILALAMNLHLLSESSGDHSLLDVMNEVYQTFHLGKNRGFTKIEFF
CCCCCCCEEEEECCCEEEHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHH
EAAKKRTGIDLKSEFGDYLDKPIPIPIEKYFHKIGVRRSDSNPEVELGFGTREDKGNLII
HHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCEECCCCCCEEEECCCCCCCCCEEE
HKIDWKFLDPSMDLSQGDEWIALNGTRIHSGNRKNLLKQFRAGEKVELLISRKGKILKRK
EEECCEEECCCCCCCCCCCEEEECCEEEECCCHHHHHHHHCCCCEEEEEECCCCHHHHHH
MKLSKRFQTSQFKFEEQISEKQKRLRNLFFGIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA