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The map label for this gene is 116332515

Identifier: 116332515

GI number: 116332515

Start: 85289

End: 86845

Strand: Direct

Name: 116332515

Synonym: LBJ_4076

Alternate gene names: NA

Gene position: 85289-86845 (Clockwise)

Preceding gene: 116332514

Following gene: 116332521

Centisome position: 28.45

GC content: 45.22

Gene sequence:

>1557_bases
ATGGTACGAGAACTCCAGTTTCGCGTCGTTCCGGAAATCGCGGGACAGGAAGAGGCGCTCAAGGCGCATATTTCTGAAAC
TCTAAAGATCAACATACAAGAGATTCGTCATATTGAGATATTGAGTCGCTCCATAGATGCAAGACAAAGGATCGTTTATT
TTAACTTAAAAGTTTTGGTTTTTATTCGGGAGGACTTTGTCGAAAAGCCGATCATTCTTCCGGATTTCCCGAATGTATCT
CGTTCGAGAGAGGTGATCGTAATTGGTGCCGGCCCTGCGGGGCTTTTTGCTTCTCTTCAGTTGATCTTGTCCGGTTTCAA
ACCGGTTCTTTTGGAAAGAGGTAAGGACGTAATGAAACGTCCTTTTGATCTGAAAGAAATAAACGTTCATCATAACGTAA
ACGAAGATTCGAATTATTGTTTTGGAGAAGGTGGAGCCGGAACTTACTCGGACGGTAAGCTTTATACAAGATCCAAAAAG
AGAGGAAATGTTCGCCAGATTCTGGAGCTGCTCGTAGGTTTCGGCGCAAACAAAGACATTCTGGTGGAAGCGCATCCTCA
TATCGGAACCAATAAACTTCCCAAAATCGTCAAAAGCATTCGAGAAAAAATCGTGGAGATGGGCGGAGAGGTTCACTTTG
AAAAAAGAGTGACCGACTTCCTGTTAAACGGAAATCAAATTCAAGGTGTGCTTACCAAAGACGGAGATAAATTCCATTCG
AAAAACGTAATTCTTGCCACCGGACATTCAGCGCGAGACATCTTCGAGTTATTGTACCGGAAAGGAATCGAACTAAAACT
CAAACCGATTGCCGTCGGCGTTCGAGTGGAACATCGACAGTCTCTGATCGATTCCATTCAATACGGTTGTGAGGTTCGAA
ATCCTTATCTTCCACCTTCTCCTTACAGTATCACAAAACAAGTGGATGGAAGGGGTGTATATTCTTTTTGTATGTGCCCG
GGAGGAGTAATTGCGGCCTGTGCCACAAAACCGGAAGAGATTGTCACGAACGGTTGGTCTTCGTCGAAAAGGGCAAGGCC
TTCTGCAAATTCCGGAATCGTAGTCGAATTAAAGATGGAAGACTTTAAATCTTTCTCCAAATACGGTCCTCTCGCTGCGA
TGGAGTTTCAAAAAGAGATCGAACAAAAGGCTTGGGTTGCGGGAGGTCGTACACAAAAAGCTCCGGCGCAAAAGCTCGTA
GACTTTGTGGAAGGAAAGGCGTCTTCGAATCTTCCGAAAACTTCCTATGCTCCGGGAATTACGTCCGTTGTGTTACGGGA
AATTTTACCGGATTTCGTTTATCAATCCTTGCAAAAGGGTTTTCGGGAATTCGATCGTATTAGGAAAGGGTATCTTACGA
ATGAGGCGGTCGTTCACGCTCCGGAGACGAGGACATCTTCTCCCGTTTGTATTCCTAGGGATTCGCGTACTCTACGACAT
ATTCGAATTCAAGGTCTTTATCCTTGTGGAGAAGGTGCGGGTTATGCGGGAGGAATTGTATCCGCCGCAATGGACGGAAT
TCGATCCGCGAACGCTTGTGTTTCTTCAATCGGGTGA

Upstream 100 bases:

>100_bases
CGAGGACTTGAAGCTTCACTTTGTTTTTCTAGTCTAACTTAACTGTGGGTTGATAAATTGCGATTGTTCTTTCGCCCTTT
CCTCAAAAACAAGTATATTT

Downstream 100 bases:

>100_bases
GTTGCTTTGGAACCTGTCTCAAAACCTCAAAGGAAATTTGTAAGAGCTCCTACATTTTCAGGTTTTGAAACGGGTTTCAA
GTCAAAACGGACTCGAATTT

Product: FAD-dependent dehydrogenase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MVRELQFRVVPEIAGQEEALKAHISETLKINIQEIRHIEILSRSIDARQRIVYFNLKVLVFIREDFVEKPIILPDFPNVS
RSREVIVIGAGPAGLFASLQLILSGFKPVLLERGKDVMKRPFDLKEINVHHNVNEDSNYCFGEGGAGTYSDGKLYTRSKK
RGNVRQILELLVGFGANKDILVEAHPHIGTNKLPKIVKSIREKIVEMGGEVHFEKRVTDFLLNGNQIQGVLTKDGDKFHS
KNVILATGHSARDIFELLYRKGIELKLKPIAVGVRVEHRQSLIDSIQYGCEVRNPYLPPSPYSITKQVDGRGVYSFCMCP
GGVIAACATKPEEIVTNGWSSSKRARPSANSGIVVELKMEDFKSFSKYGPLAAMEFQKEIEQKAWVAGGRTQKAPAQKLV
DFVEGKASSNLPKTSYAPGITSVVLREILPDFVYQSLQKGFREFDRIRKGYLTNEAVVHAPETRTSSPVCIPRDSRTLRH
IRIQGLYPCGEGAGYAGGIVSAAMDGIRSANACVSSIG

Sequences:

>Translated_518_residues
MVRELQFRVVPEIAGQEEALKAHISETLKINIQEIRHIEILSRSIDARQRIVYFNLKVLVFIREDFVEKPIILPDFPNVS
RSREVIVIGAGPAGLFASLQLILSGFKPVLLERGKDVMKRPFDLKEINVHHNVNEDSNYCFGEGGAGTYSDGKLYTRSKK
RGNVRQILELLVGFGANKDILVEAHPHIGTNKLPKIVKSIREKIVEMGGEVHFEKRVTDFLLNGNQIQGVLTKDGDKFHS
KNVILATGHSARDIFELLYRKGIELKLKPIAVGVRVEHRQSLIDSIQYGCEVRNPYLPPSPYSITKQVDGRGVYSFCMCP
GGVIAACATKPEEIVTNGWSSSKRARPSANSGIVVELKMEDFKSFSKYGPLAAMEFQKEIEQKAWVAGGRTQKAPAQKLV
DFVEGKASSNLPKTSYAPGITSVVLREILPDFVYQSLQKGFREFDRIRKGYLTNEAVVHAPETRTSSPVCIPRDSRTLRH
IRIQGLYPCGEGAGYAGGIVSAAMDGIRSANACVSSIG
>Mature_518_residues
MVRELQFRVVPEIAGQEEALKAHISETLKINIQEIRHIEILSRSIDARQRIVYFNLKVLVFIREDFVEKPIILPDFPNVS
RSREVIVIGAGPAGLFASLQLILSGFKPVLLERGKDVMKRPFDLKEINVHHNVNEDSNYCFGEGGAGTYSDGKLYTRSKK
RGNVRQILELLVGFGANKDILVEAHPHIGTNKLPKIVKSIREKIVEMGGEVHFEKRVTDFLLNGNQIQGVLTKDGDKFHS
KNVILATGHSARDIFELLYRKGIELKLKPIAVGVRVEHRQSLIDSIQYGCEVRNPYLPPSPYSITKQVDGRGVYSFCMCP
GGVIAACATKPEEIVTNGWSSSKRARPSANSGIVVELKMEDFKSFSKYGPLAAMEFQKEIEQKAWVAGGRTQKAPAQKLV
DFVEGKASSNLPKTSYAPGITSVVLREILPDFVYQSLQKGFREFDRIRKGYLTNEAVVHAPETRTSSPVCIPRDSRTLRH
IRIQGLYPCGEGAGYAGGIVSAAMDGIRSANACVSSIG

Specific function: Unknown

COG id: COG2509

COG function: function code R; Uncharacterized FAD-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 57432; Mature: 57432

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRELQFRVVPEIAGQEEALKAHISETLKINIQEIRHIEILSRSIDARQRIVYFNLKVLV
CCCCCEEEECCCCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHCCEEEEEEEEEEE
FIREDFVEKPIILPDFPNVSRSREVIVIGAGPAGLFASLQLILSGFKPVLLERGKDVMKR
EEEHHHHCCCEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHCCHHHHHC
PFDLKEINVHHNVNEDSNYCFGEGGAGTYSDGKLYTRSKKRGNVRQILELLVGFGANKDI
CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCE
LVEAHPHIGTNKLPKIVKSIREKIVEMGGEVHFEKRVTDFLLNGNQIQGVLTKDGDKFHS
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCEEEEEEECCCCCCCC
KNVILATGHSARDIFELLYRKGIELKLKPIAVGVRVEHRQSLIDSIQYGCEVRNPYLPPS
CCEEEECCCCHHHHHHHHHHCCCCEEEEEEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCC
PYSITKQVDGRGVYSFCMCPGGVIAACATKPEEIVTNGWSSSKRARPSANSGIVVELKME
CCCCEEECCCCCEEEEECCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEHH
DFKSFSKYGPLAAMEFQKEIEQKAWVAGGRTQKAPAQKLVDFVEGKASSNLPKTSYAPGI
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH
TSVVLREILPDFVYQSLQKGFREFDRIRKGYLTNEAVVHAPETRTSSPVCIPRDSRTLRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEECCCCCCEEE
IRIQGLYPCGEGAGYAGGIVSAAMDGIRSANACVSSIG
EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVRELQFRVVPEIAGQEEALKAHISETLKINIQEIRHIEILSRSIDARQRIVYFNLKVLV
CCCCCEEEECCCCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHCCEEEEEEEEEEE
FIREDFVEKPIILPDFPNVSRSREVIVIGAGPAGLFASLQLILSGFKPVLLERGKDVMKR
EEEHHHHCCCEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHCCHHHHHC
PFDLKEINVHHNVNEDSNYCFGEGGAGTYSDGKLYTRSKKRGNVRQILELLVGFGANKDI
CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCE
LVEAHPHIGTNKLPKIVKSIREKIVEMGGEVHFEKRVTDFLLNGNQIQGVLTKDGDKFHS
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCEEEEEEECCCCCCCC
KNVILATGHSARDIFELLYRKGIELKLKPIAVGVRVEHRQSLIDSIQYGCEVRNPYLPPS
CCEEEECCCCHHHHHHHHHHCCCCEEEEEEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCC
PYSITKQVDGRGVYSFCMCPGGVIAACATKPEEIVTNGWSSSKRARPSANSGIVVELKME
CCCCEEECCCCCEEEEECCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEHH
DFKSFSKYGPLAAMEFQKEIEQKAWVAGGRTQKAPAQKLVDFVEGKASSNLPKTSYAPGI
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH
TSVVLREILPDFVYQSLQKGFREFDRIRKGYLTNEAVVHAPETRTSSPVCIPRDSRTLRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEECCCCCCEEE
IRIQGLYPCGEGAGYAGGIVSAAMDGIRSANACVSSIG
EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396545 [H]