| Definition | Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008511 |
| Length | 299,762 |
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The map label for this gene is 116332514
Identifier: 116332514
GI number: 116332514
Start: 83878
End: 84882
Strand: Direct
Name: 116332514
Synonym: LBJ_4075
Alternate gene names: NA
Gene position: 83878-84882 (Clockwise)
Preceding gene: 116332513
Following gene: 116332515
Centisome position: 27.98
GC content: 40.7
Gene sequence:
>1005_bases ATGGCTCCTATTTTAGACGATTTCATCGCTTTGGAAAAAAAACAAGGGATTCAAAAGGGATTCGGCGGAGTGTTTCAAGG TCTTTGGCTGGAGGAAGAGATTTGTTTTGCAATTGCGGGGGGAGGATGTAAAGCGTTTTACGGATTGGGTTTCGGTCATG AGATGAAGTCTTGGGGATTGAAATTCAGGGAAGTTTCCGGAGTCTCAGCGGGAGCCGCGATGGTTCTTTGTTTGATCTGC GGGGACGAAGAAGAATGTGTCTCCTTTTTCGAAAACATAGTCCGAAAAAATCCGGCTAATTTCTATCTCAGTCGTCTTTT TAAAGGGGGACGTGTATTCCCGCATGAAGAGATGTATCGAAAAACGATCCGTTTTGGGATGGACTTTCAGAAAATCGTTA AATCTGAAATCAAGGTATTCATTCATACTTTGAAAGCGATCCCTAAAGAGGATTCTTTAAGAAATAAATTCAGACTTGCA AGATTGATTGCGGAAACGGCAAAGGCGTTTCTTGAGGACGAGAGGGATAAAAAGCGCGGTTTAAATACGGAAAGGATGCA AAGAATACTCAGAAAATGGAATATGAAAGAAGTTTTGTTTATGGAAAAGGATTTCGATGATGAAAAAACGGTAGAACAGA TTATTCTCAATTCTTCTTCGGTTCCTCCCGTCGTTTCCGTTCAGAGTCACGAAAAGGAATATTATTTCGATGGAGGACTT ACTAATAATCTTCTTTTGGAGGTGTTCCCTCCGGATAAAAAGACGATCGGAGTTTATTATGAACCGACTACGATCGTCGG AAAAGATCCTAAACTTTTAGAAAGATGTTATTTACAAACTCCTTCCGAACCTTTGCCGATTACTTCTTTCGATTATACGG ATCCGAACGGAGTGAGGAGGGCTTATGAACTCGGGAAACGGGATGCCCGGTTGAACAAGGATAAAATTTTCGAATATCTA AAAAAGGATTGGGCAAAAGCGGCTTTTTTCTTAAAATCCAAATAG
Upstream 100 bases:
>100_bases AAACACTTTCGTAAAAAGTGTTTCAGCTATGAAATTTGCAAGTGATTCGCTCAAACTTCTTATATCGAATTTACGTTAAA ATACGAACTCGGAGAAATCA
Downstream 100 bases:
>100_bases AATAATACATATTAGAGTTGTTGAAAAATTAATTCTCTGTCCGTTTCCGCTTTGTTGAAATGGATGTTTGAAGCGGTTTT GTTAATCCGAATCGTGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MAPILDDFIALEKKQGIQKGFGGVFQGLWLEEEICFAIAGGGCKAFYGLGFGHEMKSWGLKFREVSGVSAGAAMVLCLIC GDEEECVSFFENIVRKNPANFYLSRLFKGGRVFPHEEMYRKTIRFGMDFQKIVKSEIKVFIHTLKAIPKEDSLRNKFRLA RLIAETAKAFLEDERDKKRGLNTERMQRILRKWNMKEVLFMEKDFDDEKTVEQIILNSSSVPPVVSVQSHEKEYYFDGGL TNNLLLEVFPPDKKTIGVYYEPTTIVGKDPKLLERCYLQTPSEPLPITSFDYTDPNGVRRAYELGKRDARLNKDKIFEYL KKDWAKAAFFLKSK
Sequences:
>Translated_334_residues MAPILDDFIALEKKQGIQKGFGGVFQGLWLEEEICFAIAGGGCKAFYGLGFGHEMKSWGLKFREVSGVSAGAAMVLCLIC GDEEECVSFFENIVRKNPANFYLSRLFKGGRVFPHEEMYRKTIRFGMDFQKIVKSEIKVFIHTLKAIPKEDSLRNKFRLA RLIAETAKAFLEDERDKKRGLNTERMQRILRKWNMKEVLFMEKDFDDEKTVEQIILNSSSVPPVVSVQSHEKEYYFDGGL TNNLLLEVFPPDKKTIGVYYEPTTIVGKDPKLLERCYLQTPSEPLPITSFDYTDPNGVRRAYELGKRDARLNKDKIFEYL KKDWAKAAFFLKSK >Mature_333_residues APILDDFIALEKKQGIQKGFGGVFQGLWLEEEICFAIAGGGCKAFYGLGFGHEMKSWGLKFREVSGVSAGAAMVLCLICG DEEECVSFFENIVRKNPANFYLSRLFKGGRVFPHEEMYRKTIRFGMDFQKIVKSEIKVFIHTLKAIPKEDSLRNKFRLAR LIAETAKAFLEDERDKKRGLNTERMQRILRKWNMKEVLFMEKDFDDEKTVEQIILNSSSVPPVVSVQSHEKEYYFDGGLT NNLLLEVFPPDKKTIGVYYEPTTIVGKDPKLLERCYLQTPSEPLPITSFDYTDPNGVRRAYELGKRDARLNKDKIFEYLK KDWAKAAFFLKSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38444; Mature: 38313
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPILDDFIALEKKQGIQKGFGGVFQGLWLEEEICFAIAGGGCKAFYGLGFGHEMKSWGL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCCCCHHHHHCC KFREVSGVSAGAAMVLCLICGDEEECVSFFENIVRKNPANFYLSRLFKGGRVFPHEEMYR CHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHH KTIRFGMDFQKIVKSEIKVFIHTLKAIPKEDSLRNKFRLARLIAETAKAFLEDERDKKRG HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LNTERMQRILRKWNMKEVLFMEKDFDDEKTVEQIILNSSSVPPVVSVQSHEKEYYFDGGL CCHHHHHHHHHHCCCHHEEEECCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCEEECCCC TNNLLLEVFPPDKKTIGVYYEPTTIVGKDPKLLERCYLQTPSEPLPITSFDYTDPNGVRR CCCEEEEEECCCCCEEEEEECCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH AYELGKRDARLNKDKIFEYLKKDWAKAAFFLKSK HHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure APILDDFIALEKKQGIQKGFGGVFQGLWLEEEICFAIAGGGCKAFYGLGFGHEMKSWGL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCCCCHHHHHCC KFREVSGVSAGAAMVLCLICGDEEECVSFFENIVRKNPANFYLSRLFKGGRVFPHEEMYR CHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHH KTIRFGMDFQKIVKSEIKVFIHTLKAIPKEDSLRNKFRLARLIAETAKAFLEDERDKKRG HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LNTERMQRILRKWNMKEVLFMEKDFDDEKTVEQIILNSSSVPPVVSVQSHEKEYYFDGGL CCHHHHHHHHHHCCCHHEEEECCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCEEECCCC TNNLLLEVFPPDKKTIGVYYEPTTIVGKDPKLLERCYLQTPSEPLPITSFDYTDPNGVRR CCCEEEEEECCCCCEEEEEECCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH AYELGKRDARLNKDKIFEYLKKDWAKAAFFLKSK HHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA