Definition Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2, complete sequence.
Accession NC_008511
Length 299,762

Click here to switch to the map view.

The map label for this gene is 116332505

Identifier: 116332505

GI number: 116332505

Start: 68119

End: 69459

Strand: Direct

Name: 116332505

Synonym: LBJ_4063

Alternate gene names: NA

Gene position: 68119-69459 (Clockwise)

Preceding gene: 116332502

Following gene: 116332506

Centisome position: 22.72

GC content: 39.6

Gene sequence:

>1341_bases
ATGGACTTAGAAAGAAGTAATAAAGCCAACCTAATCTTCCTTTTCCTATCTGTGATCGGCCTTGCAGTCGTTCTTTCTGT
ACTTTACAACTGGTTCGGAGAACCTTTGAATCCGGAGGCGATGGAAATGCTCGCCAATCTCCGTTCTTTAACCGAAGAAG
GAAAGTTTTTCTCCGACCAACCCCCACTTCCATTTTTGGTTCTAAGTCTTTGGAAATCGGTCACAGGATTCAACTATACC
ACGGCTTTGTTTACGCTTTCCGCATTTATTTTTTCTTTGGGGATTCATCTCATCGGATTGATTCTTCAGAGGGAAAAATG
GAAACCGAATCATTATGTTCTCTGTTATTTGTCCGCGATCACTCCTCTGACTTATTCCATACCTCTGGTTTTGTATCCGG
AATGTCTGAGTTTATTTTTTCTTTTGATTCTATTTCTTGCATTCAGGATGGAGACTTTGGGCGACATATTCATTCTCATC
GTCTGTATTCTTGGAAGTGTTTTCTCTCACTTTACGATCTTTTTAGTCGGTTTTACGATTTTCGTAGTCAAGGCAGGAAC
ATTAGGAATCCGCGAAAGAAAGAAACATCAATCCGTTTTTTTTAAAAGAAGAAATATTCCTCAATTGGTCTTGTTGGCGT
ATGTAGGAATCTTCCTTACGTTGTTGGCTGTTTTGATCGTCACAAATTTCTACGGCGTAAATTCTTTCGAAATGTTCTAC
AAATTGCTCTGGAGTTATCTCCGCAACTTCGGACCTTTGTTTTTAATTTTATATATCGGGAACTTCCTTTTAAAATCCGA
AAAAGAGCTCAACACCGTGGCGGCGAGTGCGGTCTTAATCGTAATCCTTCTTGTGTCCGTTTATTTTTCCGTTAAACCGA
CATCCGGACTTAACGCTGCCAAACTCGGAGCGTTCACGAAGGATCTTGTGGGCTTAAAAAATAGGGGAGTGATTCAGACG
GACGAAAGAGTTTATACGAGTCCTTCCGTTTCGTCTTACGTGTATTTTCATTCCAAACAAAGATTACAAACGATTCGACC
GAAAGAATGGAAAAATCGGGATTATCTGTTTCTTGAGGAAATCTGGCTCGCGGATAAAAGGGAGATGCTCAAACGTTATA
AGTTTAAAAATCCTCAATTCGTATTTTTGTCGGGAGAACAGATATTAATCACAGGATTTCTGACAAAAGTTATCTCCGGT
GAAAAGGAGAATACACAAATTAAGATTCAAGTTGAAAAAGCAAAAACTCAACTTTCTTTAAAAACCGGGGAGAAGAGATT
TAACCGTTTTCTAACGGGGATATTTTCCACCTCTGCGTTAAGTCCGGAACTGAATCCTTGA

Upstream 100 bases:

>100_bases
CCCGATTCGAGGTTCTCATTGATACTTCAAAATGTGTTGGTAGAATTTCACCCAAATTTTTATCCTTGCTCTGATTTCCG
CAAAAACCCTACGAGCTCCC

Downstream 100 bases:

>100_bases
AGTTGATCTGGAAAAAAAAATCGACCGTAAAAAATAAGAACTCCGTCTCTAAAGAAAAAAATACGGTGATATCTCTGCCA
TTCTATAAAGAAAAATTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MDLERSNKANLIFLFLSVIGLAVVLSVLYNWFGEPLNPEAMEMLANLRSLTEEGKFFSDQPPLPFLVLSLWKSVTGFNYT
TALFTLSAFIFSLGIHLIGLILQREKWKPNHYVLCYLSAITPLTYSIPLVLYPECLSLFFLLILFLAFRMETLGDIFILI
VCILGSVFSHFTIFLVGFTIFVVKAGTLGIRERKKHQSVFFKRRNIPQLVLLAYVGIFLTLLAVLIVTNFYGVNSFEMFY
KLLWSYLRNFGPLFLILYIGNFLLKSEKELNTVAASAVLIVILLVSVYFSVKPTSGLNAAKLGAFTKDLVGLKNRGVIQT
DERVYTSPSVSSYVYFHSKQRLQTIRPKEWKNRDYLFLEEIWLADKREMLKRYKFKNPQFVFLSGEQILITGFLTKVISG
EKENTQIKIQVEKAKTQLSLKTGEKRFNRFLTGIFSTSALSPELNP

Sequences:

>Translated_446_residues
MDLERSNKANLIFLFLSVIGLAVVLSVLYNWFGEPLNPEAMEMLANLRSLTEEGKFFSDQPPLPFLVLSLWKSVTGFNYT
TALFTLSAFIFSLGIHLIGLILQREKWKPNHYVLCYLSAITPLTYSIPLVLYPECLSLFFLLILFLAFRMETLGDIFILI
VCILGSVFSHFTIFLVGFTIFVVKAGTLGIRERKKHQSVFFKRRNIPQLVLLAYVGIFLTLLAVLIVTNFYGVNSFEMFY
KLLWSYLRNFGPLFLILYIGNFLLKSEKELNTVAASAVLIVILLVSVYFSVKPTSGLNAAKLGAFTKDLVGLKNRGVIQT
DERVYTSPSVSSYVYFHSKQRLQTIRPKEWKNRDYLFLEEIWLADKREMLKRYKFKNPQFVFLSGEQILITGFLTKVISG
EKENTQIKIQVEKAKTQLSLKTGEKRFNRFLTGIFSTSALSPELNP
>Mature_446_residues
MDLERSNKANLIFLFLSVIGLAVVLSVLYNWFGEPLNPEAMEMLANLRSLTEEGKFFSDQPPLPFLVLSLWKSVTGFNYT
TALFTLSAFIFSLGIHLIGLILQREKWKPNHYVLCYLSAITPLTYSIPLVLYPECLSLFFLLILFLAFRMETLGDIFILI
VCILGSVFSHFTIFLVGFTIFVVKAGTLGIRERKKHQSVFFKRRNIPQLVLLAYVGIFLTLLAVLIVTNFYGVNSFEMFY
KLLWSYLRNFGPLFLILYIGNFLLKSEKELNTVAASAVLIVILLVSVYFSVKPTSGLNAAKLGAFTKDLVGLKNRGVIQT
DERVYTSPSVSSYVYFHSKQRLQTIRPKEWKNRDYLFLEEIWLADKREMLKRYKFKNPQFVFLSGEQILITGFLTKVISG
EKENTQIKIQVEKAKTQLSLKTGEKRFNRFLTGIFSTSALSPELNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51057; Mature: 51057

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA