| Definition | Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008511 |
| Length | 299,762 |
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The map label for this gene is 116332502
Identifier: 116332502
GI number: 116332502
Start: 64306
End: 64833
Strand: Direct
Name: 116332502
Synonym: LBJ_4060
Alternate gene names: NA
Gene position: 64306-64833 (Clockwise)
Preceding gene: 116332501
Following gene: 116332505
Centisome position: 21.45
GC content: 40.15
Gene sequence:
>528_bases ATGGACATTCTCTTATTTGATTCCAATCAAAAGATTCAATCCACCCTGATAGAAAGTGCTGTAGGAACGGATTCTCTTTT GGTTCCTAATGTTTATTGGGATCGTTTGAATCTTAAGGAAAAAAAGGCTCTTCGGGGTAAACTTCCCTTTTTATTGAGAA AATATTCTAAGCAGATCGCGTCTATGAGGCGTCTGCATGATCGGGCGGGTAAGATCAAATACAATCGGGGGGTGGGTAAA ATGAAAAAATTGAGCATTCGGGTTCATACTGGTGTTTGGGCGACTTTAGGTGTGTTGGCGGCGGCTCATGGTGTTTCGAG ATGTTATCTTTTTAATTATATGCTTTGGCTGGAAGATCTTGGTGTGGGGGATTCTACTGTGGAAACTTTAAATAGGGGAG TTCCTAGCTTTCACTGGACTTACAAAATGACTTGGAAGATTAACAGGAGACAAAATCTTATTTCAAGAGAATTGGAGTTC GAACCAAATCCGATGACTGATATATTTCCATACTATCTGCGTTCCTAA
Upstream 100 bases:
>100_bases CTACATCTGAGGTTTTTGGACAAGTTCTTAGTTTTTTCAATAGAATCTTTTATTTCTATAAAATTATTCCGCCGTGAAAT TTGAAAGAACCGTATCTAAT
Downstream 100 bases:
>100_bases AATTCCAAAAACGTCAACAAGTTTAAAATTTAAGAAAACATGAGCTTGGTATAACCAATGCGAAAGCGATTGTAGTGGAA ATTCCGAAGGAATTGGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MDILLFDSNQKIQSTLIESAVGTDSLLVPNVYWDRLNLKEKKALRGKLPFLLRKYSKQIASMRRLHDRAGKIKYNRGVGK MKKLSIRVHTGVWATLGVLAAAHGVSRCYLFNYMLWLEDLGVGDSTVETLNRGVPSFHWTYKMTWKINRRQNLISRELEF EPNPMTDIFPYYLRS
Sequences:
>Translated_175_residues MDILLFDSNQKIQSTLIESAVGTDSLLVPNVYWDRLNLKEKKALRGKLPFLLRKYSKQIASMRRLHDRAGKIKYNRGVGK MKKLSIRVHTGVWATLGVLAAAHGVSRCYLFNYMLWLEDLGVGDSTVETLNRGVPSFHWTYKMTWKINRRQNLISRELEF EPNPMTDIFPYYLRS >Mature_175_residues MDILLFDSNQKIQSTLIESAVGTDSLLVPNVYWDRLNLKEKKALRGKLPFLLRKYSKQIASMRRLHDRAGKIKYNRGVGK MKKLSIRVHTGVWATLGVLAAAHGVSRCYLFNYMLWLEDLGVGDSTVETLNRGVPSFHWTYKMTWKINRRQNLISRELEF EPNPMTDIFPYYLRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20367; Mature: 20367
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILLFDSNQKIQSTLIESAVGTDSLLVPNVYWDRLNLKEKKALRGKLPFLLRKYSKQIA CEEEEECCCCHHHHHHHHHHCCCCCEEECCHHHCCCCCHHHHHHHCCHHHHHHHHHHHHH SMRRLHDRAGKIKYNRGVGKMKKLSIRVHTGVWATLGVLAAAHGVSRCYLFNYMLWLEDL HHHHHHHHHCCEEECCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GVGDSTVETLNRGVPSFHWTYKMTWKINRRQNLISRELEFEPNPMTDIFPYYLRS CCCHHHHHHHHCCCCCEEEEEEEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MDILLFDSNQKIQSTLIESAVGTDSLLVPNVYWDRLNLKEKKALRGKLPFLLRKYSKQIA CEEEEECCCCHHHHHHHHHHCCCCCEEECCHHHCCCCCHHHHHHHCCHHHHHHHHHHHHH SMRRLHDRAGKIKYNRGVGKMKKLSIRVHTGVWATLGVLAAAHGVSRCYLFNYMLWLEDL HHHHHHHHHCCEEECCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GVGDSTVETLNRGVPSFHWTYKMTWKINRRQNLISRELEFEPNPMTDIFPYYLRS CCCHHHHHHHHCCCCCEEEEEEEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA