| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116329445
Identifier: 116329445
GI number: 116329445
Start: 3466073
End: 3467077
Strand: Direct
Name: 116329445
Synonym: LBL_2914
Alternate gene names: NA
Gene position: 3466073-3467077 (Clockwise)
Preceding gene: 116329443
Following gene: 116329446
Centisome position: 95.9
GC content: 38.51
Gene sequence:
>1005_bases ATGGAAGACAAATTTCAGGAACTATTCGAAATCAGAGATTCTCGGATCAATGTACGAGAAATCATGGAAGAAATCGAATC CAAACTCAAAAAAAATCCTTCCACAAAGGAAGACATCGAAAAACTCACTCATTGGAAATTTTCCCCTCCGAGCCCGGAAG GTTATCGGGATTTTGATCCCGCCGAAATTGCTCATCTTTTCGAAAAAGGAATCTCTCCTCCTAAATTTTCCAATCCTAAA CTTCGGTTTGTGCGCGGACCTCTCAAATGGCTTTTGATTCGTTTTGCGGAATTCTATTCGTTTTTAGATAAAAAACTTTC AGAAAACAGAACCCGCGCATTCTACAGCGTATTGCACGAATTAATTCTAATCCGTTGTGAAAATCAAAATCTAAAAAGAA AGATGGAGTCTTTTTATTCCGAATTTTTAGAATGGAATCAAACCATCGGAAAAGAAATCAGGCCCGAATTTCTTTGGGCG AATGAGGATCTCTACTCGGAAAACATTGTTGAAGAAAGCGAAAACTTTTTGCTGGAATCCATTGATCCTTCCGAAAGGGT TTTAGTCCTATCGCCGGGTTGGGGCAAAATACTCAAACAACTTTTAAAATTAGGCTCCAAATTCGATTCGGTCAGTTGGA ACAAATCCTGTTCGGAATTCATCGGAAATTCAATAACCACGAACATCTACCTGGAAGAACCGGGAGCAATTCCGAAAGAT TGTTCAAAATATTCTAAAATTTTAATATATGAGAATTTATCAATTCATCCGCACTGGCTGATCGAAAAGACCCTTCGAGC TCTTAGCTTCGGCGTATCTTCCGGTACGGAAATCCGTTTTCGGTTCTCAAACGAAAACTCCAATTACCTTTCTCCATTTT TGCCCTTAAGGCTTACAAAAATTCAGGAACCGTTGGTGCGGAATTATCTCAAACAACTTGGCTTTAGAAATATTATAGAA AAAAAATCGGAAGACGGTTTTACCGTTCTTTCATTTCGAAAATGA
Upstream 100 bases:
>100_bases TAATAAGGCATTTCATAGAATTCTTATTTTTCCGTAAAAATACTGTTGTTTTAGAAAATGAATAAAAAACAATCGAATAA AATTCTTTCCCCTTTTGAGT
Downstream 100 bases:
>100_bases AGGTCTATCAGCACGTCACCGAATTTCGAGATGGAGACGGAATCGGAAACGACATCAAAGGGATTAGAAACGTTCTCGAA ACCTTAAACGTTTCTAACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MEDKFQELFEIRDSRINVREIMEEIESKLKKNPSTKEDIEKLTHWKFSPPSPEGYRDFDPAEIAHLFEKGISPPKFSNPK LRFVRGPLKWLLIRFAEFYSFLDKKLSENRTRAFYSVLHELILIRCENQNLKRKMESFYSEFLEWNQTIGKEIRPEFLWA NEDLYSENIVEESENFLLESIDPSERVLVLSPGWGKILKQLLKLGSKFDSVSWNKSCSEFIGNSITTNIYLEEPGAIPKD CSKYSKILIYENLSIHPHWLIEKTLRALSFGVSSGTEIRFRFSNENSNYLSPFLPLRLTKIQEPLVRNYLKQLGFRNIIE KKSEDGFTVLSFRK
Sequences:
>Translated_334_residues MEDKFQELFEIRDSRINVREIMEEIESKLKKNPSTKEDIEKLTHWKFSPPSPEGYRDFDPAEIAHLFEKGISPPKFSNPK LRFVRGPLKWLLIRFAEFYSFLDKKLSENRTRAFYSVLHELILIRCENQNLKRKMESFYSEFLEWNQTIGKEIRPEFLWA NEDLYSENIVEESENFLLESIDPSERVLVLSPGWGKILKQLLKLGSKFDSVSWNKSCSEFIGNSITTNIYLEEPGAIPKD CSKYSKILIYENLSIHPHWLIEKTLRALSFGVSSGTEIRFRFSNENSNYLSPFLPLRLTKIQEPLVRNYLKQLGFRNIIE KKSEDGFTVLSFRK >Mature_334_residues MEDKFQELFEIRDSRINVREIMEEIESKLKKNPSTKEDIEKLTHWKFSPPSPEGYRDFDPAEIAHLFEKGISPPKFSNPK LRFVRGPLKWLLIRFAEFYSFLDKKLSENRTRAFYSVLHELILIRCENQNLKRKMESFYSEFLEWNQTIGKEIRPEFLWA NEDLYSENIVEESENFLLESIDPSERVLVLSPGWGKILKQLLKLGSKFDSVSWNKSCSEFIGNSITTNIYLEEPGAIPKD CSKYSKILIYENLSIHPHWLIEKTLRALSFGVSSGTEIRFRFSNENSNYLSPFLPLRLTKIQEPLVRNYLKQLGFRNIIE KKSEDGFTVLSFRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39372; Mature: 39372
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDKFQELFEIRDSRINVREIMEEIESKLKKNPSTKEDIEKLTHWKFSPPSPEGYRDFDP CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCH AEIAHLFEKGISPPKFSNPKLRFVRGPLKWLLIRFAEFYSFLDKKLSENRTRAFYSVLHE HHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILIRCENQNLKRKMESFYSEFLEWNQTIGKEIRPEFLWANEDLYSENIVEESENFLLES HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCHHHHHHHHHHHHHHHHC IDPSERVLVLSPGWGKILKQLLKLGSKFDSVSWNKSCSEFIGNSITTNIYLEEPGAIPKD CCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCCHH CSKYSKILIYENLSIHPHWLIEKTLRALSFGVSSGTEIRFRFSNENSNYLSPFLPLRLTK HHHHCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHH IQEPLVRNYLKQLGFRNIIEKKSEDGFTVLSFRK HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC >Mature Secondary Structure MEDKFQELFEIRDSRINVREIMEEIESKLKKNPSTKEDIEKLTHWKFSPPSPEGYRDFDP CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCH AEIAHLFEKGISPPKFSNPKLRFVRGPLKWLLIRFAEFYSFLDKKLSENRTRAFYSVLHE HHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILIRCENQNLKRKMESFYSEFLEWNQTIGKEIRPEFLWANEDLYSENIVEESENFLLES HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCHHHHHHHHHHHHHHHHC IDPSERVLVLSPGWGKILKQLLKLGSKFDSVSWNKSCSEFIGNSITTNIYLEEPGAIPKD CCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCCHH CSKYSKILIYENLSIHPHWLIEKTLRALSFGVSSGTEIRFRFSNENSNYLSPFLPLRLTK HHHHCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHH IQEPLVRNYLKQLGFRNIIEKKSEDGFTVLSFRK HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA