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The map label for this gene is ygjQ [H]

Identifier: 116329443

GI number: 116329443

Start: 3464277

End: 3464969

Strand: Direct

Name: ygjQ [H]

Synonym: LBL_2912

Alternate gene names: 116329443

Gene position: 3464277-3464969 (Clockwise)

Preceding gene: 116329433

Following gene: 116329445

Centisome position: 95.85

GC content: 38.67

Gene sequence:

>693_bases
GTGTTTGGCTTAAGTTTTCTTAAAAAATCTAAATTTTATGTCCGAAGTTTTTTCGTATCTTGCATCATTATAGCGCCTCC
GATCGCGATCGATTTCAGTTTCGAAGAATTATATTTTCGCACGGAAAAATTTCAGAACTATAGGTCCGCAAAATTCGCTA
CAGCAGCTATAGTTCCCGGAGCTTCGGTCTACAAAAACGAGCCCTCCGCCATTTTAAAAGATCGGTTGGATTGCGCTCTG
GAATTGTATCATCAGGGAAAAGTAAAAAAGATTCTCCTCTCGGGAGATAACGGTTCGATTTACTATAATGAAGTAAAGCC
GATGTTACTTTACATTCTTAAAAACGAAGTGAACGAAAAAGACATATTCGTCGATCACGCAGGCTTTAGAACGTTAGACA
CGTTGATTCGTGCAAAAGAAATTTTTCAGATAAAAGATCTGATCTTTGTAAGTCAGAAAGTATATCAACCTCGGGCCGCT
TTTCTTGCAAATAAAATCGGTCTTAGATTTCAAGCCTTCGAATCGGATCGAAAAATTTATACAAGCGGGCCCTTCAGTAG
ATTCAGAGAGTTTTTCGCAAGAACTCTTGCCTGGATCGACATGAATTTATTCAAAACGAATCTGAAATACCTGGGCAATC
CGTTCCCAATCGAAGAAAGTGGCATTAAAACTTGGAAAGGTTCAGTGCTTTAA

Upstream 100 bases:

>100_bases
CGATCAAAACCCGTTGAAAAGAAAAAAAGAATTTTCTCTTTTGAAATTTGTCTTGTAGCCTACCAAAAAAGCTTCTTGAT
TTTGTCAGATTTTCAATCCT

Downstream 100 bases:

>100_bases
AATTTTATAATCTAATTTTCGATTCAGATTTTATGAATCGTAAATCCACCCAATCCAGAGTTTCAGATCGTTCGATGCCA
ATGATAAACGTCTTGAATCG

Product: SanA-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MFGLSFLKKSKFYVRSFFVSCIIIAPPIAIDFSFEELYFRTEKFQNYRSAKFATAAIVPGASVYKNEPSAILKDRLDCAL
ELYHQGKVKKILLSGDNGSIYYNEVKPMLLYILKNEVNEKDIFVDHAGFRTLDTLIRAKEIFQIKDLIFVSQKVYQPRAA
FLANKIGLRFQAFESDRKIYTSGPFSRFREFFARTLAWIDMNLFKTNLKYLGNPFPIEESGIKTWKGSVL

Sequences:

>Translated_230_residues
MFGLSFLKKSKFYVRSFFVSCIIIAPPIAIDFSFEELYFRTEKFQNYRSAKFATAAIVPGASVYKNEPSAILKDRLDCAL
ELYHQGKVKKILLSGDNGSIYYNEVKPMLLYILKNEVNEKDIFVDHAGFRTLDTLIRAKEIFQIKDLIFVSQKVYQPRAA
FLANKIGLRFQAFESDRKIYTSGPFSRFREFFARTLAWIDMNLFKTNLKYLGNPFPIEESGIKTWKGSVL
>Mature_230_residues
MFGLSFLKKSKFYVRSFFVSCIIIAPPIAIDFSFEELYFRTEKFQNYRSAKFATAAIVPGASVYKNEPSAILKDRLDCAL
ELYHQGKVKKILLSGDNGSIYYNEVKPMLLYILKNEVNEKDIFVDHAGFRTLDTLIRAKEIFQIKDLIFVSQKVYQPRAA
FLANKIGLRFQAFESDRKIYTSGPFSRFREFFARTLAWIDMNLFKTNLKYLGNPFPIEESGIKTWKGSVL

Specific function: Unknown

COG id: COG2949

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli sanA [H]

Homologues:

Organism=Escherichia coli, GI1789468, Length=155, Percent_Identity=37.4193548387097, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1788466, Length=145, Percent_Identity=37.2413793103448, Blast_Score=94, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 26633; Mature: 26633

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGLSFLKKSKFYVRSFFVSCIIIAPPIAIDFSFEELYFRTEKFQNYRSAKFATAAIVPG
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHEEECCC
ASVYKNEPSAILKDRLDCALELYHQGKVKKILLSGDNGSIYYNEVKPMLLYILKNEVNEK
CHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECHHHHHHHHHHHCCCCC
DIFVDHAGFRTLDTLIRAKEIFQIKDLIFVSQKVYQPRAAFLANKIGLRFQAFESDRKIY
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCEEE
TSGPFSRFREFFARTLAWIDMNLFKTNLKYLGNPFPIEESGIKTWKGSVL
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFGLSFLKKSKFYVRSFFVSCIIIAPPIAIDFSFEELYFRTEKFQNYRSAKFATAAIVPG
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHEEECCC
ASVYKNEPSAILKDRLDCALELYHQGKVKKILLSGDNGSIYYNEVKPMLLYILKNEVNEK
CHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECHHHHHHHHHHHCCCCC
DIFVDHAGFRTLDTLIRAKEIFQIKDLIFVSQKVYQPRAAFLANKIGLRFQAFESDRKIY
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCEEE
TSGPFSRFREFFARTLAWIDMNLFKTNLKYLGNPFPIEESGIKTWKGSVL
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]