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The map label for this gene is nudL [H]

Identifier: 116329423

GI number: 116329423

Start: 3443636

End: 3444307

Strand: Direct

Name: nudL [H]

Synonym: LBL_2891

Alternate gene names: 116329423

Gene position: 3443636-3444307 (Clockwise)

Preceding gene: 116329422

Following gene: 116329424

Centisome position: 95.27

GC content: 39.58

Gene sequence:

>672_bases
ATGAGATTTGATTTTCAGTCGCTCAAAAATCGACTTGCAGTTCCTCAGAAAATTTTTACCGGAATTCCAACTCCGCCGAT
CGGAGAAGAAAAGTCCAAGGCTTCCTCCGTTATTCTTCCTATTTATGAAAAGGAAAATTCGACACAGGGACTGATTTTAC
AAAAAAGAAATTTCAATCTAAAAGCACACCCTGGACAAATTTCCTTTCCCGGAGGAGCTTATTCCAAAACGGATAAAAAT
CTTTTAAACACAGCTCTAAGAGAATGGGAAGAAGAAATGGGAGAATCCAGTTCCGTTCTGGAAGTTTTAGGAGAATATGA
CGGATTTTTTACTCACACCGGATTTCATATTTCCCCCTTCATTGCACGTTACAACGGATCGTTTCTATTCGATACAAATC
CGGAAGAAGTAGAACGTCCTATCCTATTGGATCTCAATCGCTTGGAAACGGCTCCGTTTGATTCCATTCGAATTCGGAGA
TCGGGCGCGAAAGAAATTGAAATTTATTACTTCGACCTCGAAGAAGAACTACTTTGGGGAATCACCGGAAGAATCATCGT
AAATTTTCTGAGAGACTACGCAAACTTTGAAAGGGAACCTATTCTAGCGGAACCGAATTTAAGTAGTCCTCCTTTTTTTG
ATCCCGCTCGTAAATTCTTCCAAAAAAATTAA

Upstream 100 bases:

>100_bases
CATTAGAAAATGTACCTTACGAATCGAATATCAAGGGACTCATTCCGATAAATAAAAAATTCGAATAGAAATATTTAACT
CTTCCAATGCAGGTGAAAAA

Downstream 100 bases:

>100_bases
AAAGACATTTTTTTCTTCATTTAGTTTGCCATTTGAAAATTGTGGATAAAACGACATGTTTGTTTTAACCCGAATCCTCT
TTGGAAAAAATACCGATTAG

Product: NUDIX domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MRFDFQSLKNRLAVPQKIFTGIPTPPIGEEKSKASSVILPIYEKENSTQGLILQKRNFNLKAHPGQISFPGGAYSKTDKN
LLNTALREWEEEMGESSSVLEVLGEYDGFFTHTGFHISPFIARYNGSFLFDTNPEEVERPILLDLNRLETAPFDSIRIRR
SGAKEIEIYYFDLEEELLWGITGRIIVNFLRDYANFEREPILAEPNLSSPPFFDPARKFFQKN

Sequences:

>Translated_223_residues
MRFDFQSLKNRLAVPQKIFTGIPTPPIGEEKSKASSVILPIYEKENSTQGLILQKRNFNLKAHPGQISFPGGAYSKTDKN
LLNTALREWEEEMGESSSVLEVLGEYDGFFTHTGFHISPFIARYNGSFLFDTNPEEVERPILLDLNRLETAPFDSIRIRR
SGAKEIEIYYFDLEEELLWGITGRIIVNFLRDYANFEREPILAEPNLSSPPFFDPARKFFQKN
>Mature_223_residues
MRFDFQSLKNRLAVPQKIFTGIPTPPIGEEKSKASSVILPIYEKENSTQGLILQKRNFNLKAHPGQISFPGGAYSKTDKN
LLNTALREWEEEMGESSSVLEVLGEYDGFFTHTGFHISPFIARYNGSFLFDTNPEEVERPILLDLNRLETAPFDSIRIRR
SGAKEIEIYYFDLEEELLWGITGRIIVNFLRDYANFEREPILAEPNLSSPPFFDPARKFFQKN

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1788115, Length=158, Percent_Identity=29.746835443038, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 25645; Mature: 25645

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFDFQSLKNRLAVPQKIFTGIPTPPIGEEKSKASSVILPIYEKENSTQGLILQKRNFNL
CCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCE
KAHPGQISFPGGAYSKTDKNLLNTALREWEEEMGESSSVLEVLGEYDGFFTHTGFHISPF
EECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCHH
IARYNGSFLFDTNPEEVERPILLDLNRLETAPFDSIRIRRSGAKEIEIYYFDLEEELLWG
HEECCCCEEECCCHHHHCCCEEEECHHHCCCCCCCEEEECCCCCEEEEEEEECHHHHHHH
ITGRIIVNFLRDYANFEREPILAEPNLSSPPFFDPARKFFQKN
HHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MRFDFQSLKNRLAVPQKIFTGIPTPPIGEEKSKASSVILPIYEKENSTQGLILQKRNFNL
CCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCE
KAHPGQISFPGGAYSKTDKNLLNTALREWEEEMGESSSVLEVLGEYDGFFTHTGFHISPF
EECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCHH
IARYNGSFLFDTNPEEVERPILLDLNRLETAPFDSIRIRRSGAKEIEIYYFDLEEELLWG
HEECCCCEEECCCHHHHCCCEEEECHHHCCCCCCCEEEECCCCCEEEEEEEECHHHHHHH
ITGRIIVNFLRDYANFEREPILAEPNLSSPPFFDPARKFFQKN
HHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]