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The map label for this gene is rsgA [H]

Identifier: 116329356

GI number: 116329356

Start: 3341494

End: 3342564

Strand: Direct

Name: rsgA [H]

Synonym: LBL_2810

Alternate gene names: 116329356

Gene position: 3341494-3342564 (Clockwise)

Preceding gene: 116329355

Following gene: 116329359

Centisome position: 92.45

GC content: 41.36

Gene sequence:

>1071_bases
ATGTCACAATTAAATTCAATTCTCGCCTCCTATGGATGGAAACCGGAAGCGTTTCTTACGGAACCCATTGAACATTTAAA
GCCTGGACGGGTTATATCCGTCTACGGAGAATATTCAAAAATTCTAATGGAATTCGGAGAACGAAAAGGAATCCCCTCTG
GAACTTTGACGTCCTCGGGAGAATTTATCACGACAGGAGATTGGGTTTTGGTTCGAGAAATCAACGGAGAAGATCTTTGT
ATCGTAGAGAAAATCCTTCCTCGAAAAACGTTTTTAAGAAGAAAAAATCCCGGAAAACGAAATAACTTTCAAGTAATCGC
TTCGAACATCGACCTTTTGCTCGTGATCATGGGTTTAGACGGAGACTATAGTCCGAGAAGGATAGAACGTTATTTATTCT
TGGCTAAGATTAGTGGCGCGGAAACGGCGATCATTTTAAATAAAAAAGACCTTTGCGAACGATCTGAACGAAGATTTTCA
GAAATTAAAACGATCGCCGGAGAAATTCCGGTCGAAATGATTTCCGCGTTGGACCCGACAAATATCCCGAAACTTCTCCG
CTTTATAAAACCCGGGAAGACGATCGCGTTTTTAGGATCCTCGGGTGCGGGTAAATCCACGATCATCAATTCACTATTAG
GCGTTCAAATTCAAAAAACGAACAAAGTCAAATCCTCGGATGGAACCGGAAAACATACCACAACTCACAGAGAACTATTT
CTTCTCTCCTCAGGCGGAATTCTCATGGATAATCCCGGAATTAGAGAAGTTGGTCTTTTTTCAGCAAGTGGCGAAGAGGA
TATGGAAAAAATCTTTCCCGAAATTGCAATCGCCTCACAAGAGTGCCGTTTTAAAGATTGTTCGCATTGCGGAGAGCCGG
ACTGCGGAGTCGCGGCCGCTTTAGAAGCCGGTAAAATCGATGAAATACGATATTCTTCTTACTTAAAGTTAACCAAAGAA
TTACTGGCCTATAAAGTTTCAATCGATCCCAGAGAAACAAGGAAAAAGAAACAAAAAGACAAACAACTGTCCAAAGCATT
ACGCAAACGATTGAAAGACAAAGGAAAATAG

Upstream 100 bases:

>100_bases
TAAGTTAGCCAGGTTTGAGTCAAAATTACGCATATGATCGTTTGATTCTATTCTAAAAATTGGAACGTCCGTATCTTGAT
TTGAAATCGGAAGGAATCGT

Downstream 100 bases:

>100_bases
TTTCCTCTATTAGATTTTTCTTGTTTTTCAAAGGGTTTCCGTAAATCCAAAAAGAACCTTTCTTTGTCTATAATAGACTC
CGAAGGAAATAAAAAATCAA

Product: GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MSQLNSILASYGWKPEAFLTEPIEHLKPGRVISVYGEYSKILMEFGERKGIPSGTLTSSGEFITTGDWVLVREINGEDLC
IVEKILPRKTFLRRKNPGKRNNFQVIASNIDLLLVIMGLDGDYSPRRIERYLFLAKISGAETAIILNKKDLCERSERRFS
EIKTIAGEIPVEMISALDPTNIPKLLRFIKPGKTIAFLGSSGAGKSTIINSLLGVQIQKTNKVKSSDGTGKHTTTHRELF
LLSSGGILMDNPGIREVGLFSASGEEDMEKIFPEIAIASQECRFKDCSHCGEPDCGVAAALEAGKIDEIRYSSYLKLTKE
LLAYKVSIDPRETRKKKQKDKQLSKALRKRLKDKGK

Sequences:

>Translated_356_residues
MSQLNSILASYGWKPEAFLTEPIEHLKPGRVISVYGEYSKILMEFGERKGIPSGTLTSSGEFITTGDWVLVREINGEDLC
IVEKILPRKTFLRRKNPGKRNNFQVIASNIDLLLVIMGLDGDYSPRRIERYLFLAKISGAETAIILNKKDLCERSERRFS
EIKTIAGEIPVEMISALDPTNIPKLLRFIKPGKTIAFLGSSGAGKSTIINSLLGVQIQKTNKVKSSDGTGKHTTTHRELF
LLSSGGILMDNPGIREVGLFSASGEEDMEKIFPEIAIASQECRFKDCSHCGEPDCGVAAALEAGKIDEIRYSSYLKLTKE
LLAYKVSIDPRETRKKKQKDKQLSKALRKRLKDKGK
>Mature_355_residues
SQLNSILASYGWKPEAFLTEPIEHLKPGRVISVYGEYSKILMEFGERKGIPSGTLTSSGEFITTGDWVLVREINGEDLCI
VEKILPRKTFLRRKNPGKRNNFQVIASNIDLLLVIMGLDGDYSPRRIERYLFLAKISGAETAIILNKKDLCERSERRFSE
IKTIAGEIPVEMISALDPTNIPKLLRFIKPGKTIAFLGSSGAGKSTIINSLLGVQIQKTNKVKSSDGTGKHTTTHRELFL
LSSGGILMDNPGIREVGLFSASGEEDMEKIFPEIAIASQECRFKDCSHCGEPDCGVAAALEAGKIDEIRYSSYLKLTKEL
LAYKVSIDPRETRKKKQKDKQLSKALRKRLKDKGK

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=249, Percent_Identity=32.5301204819277, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 39627; Mature: 39495

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLNSILASYGWKPEAFLTEPIEHLKPGRVISVYGEYSKILMEFGERKGIPSGTLTSSG
CCHHHHHHHHCCCCCCHHHHCCHHHCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCC
EFITTGDWVLVREINGEDLCIVEKILPRKTFLRRKNPGKRNNFQVIASNIDLLLVIMGLD
CEEEECCEEEEEECCCCCEEHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEECC
GDYSPRRIERYLFLAKISGAETAIILNKKDLCERSERRFSEIKTIAGEIPVEMISALDPT
CCCCHHHHHHHHEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC
NIPKLLRFIKPGKTIAFLGSSGAGKSTIINSLLGVQIQKTNKVKSSDGTGKHTTTHRELF
CHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEEEE
LLSSGGILMDNPGIREVGLFSASGEEDMEKIFPEIAIASQECRFKDCSHCGEPDCGVAAA
EEECCCEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHH
LEAGKIDEIRYSSYLKLTKELLAYKVSIDPRETRKKKQKDKQLSKALRKRLKDKGK
HCCCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQLNSILASYGWKPEAFLTEPIEHLKPGRVISVYGEYSKILMEFGERKGIPSGTLTSSG
CHHHHHHHHCCCCCCHHHHCCHHHCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCC
EFITTGDWVLVREINGEDLCIVEKILPRKTFLRRKNPGKRNNFQVIASNIDLLLVIMGLD
CEEEECCEEEEEECCCCCEEHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEECC
GDYSPRRIERYLFLAKISGAETAIILNKKDLCERSERRFSEIKTIAGEIPVEMISALDPT
CCCCHHHHHHHHEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC
NIPKLLRFIKPGKTIAFLGSSGAGKSTIINSLLGVQIQKTNKVKSSDGTGKHTTTHRELF
CHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEEEE
LLSSGGILMDNPGIREVGLFSASGEEDMEKIFPEIAIASQECRFKDCSHCGEPDCGVAAA
EEECCCEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHH
LEAGKIDEIRYSSYLKLTKELLAYKVSIDPRETRKKKQKDKQLSKALRKRLKDKGK
HCCCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA