| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116329288
Identifier: 116329288
GI number: 116329288
Start: 3238170
End: 3239108
Strand: Direct
Name: 116329288
Synonym: LBL_2734
Alternate gene names: NA
Gene position: 3238170-3239108 (Clockwise)
Preceding gene: 116329287
Following gene: 116329289
Centisome position: 89.59
GC content: 36.63
Gene sequence:
>939_bases TTGAAACATTCTTCTCAAAAACTCAAACAGGTTCTGAAAAGAATTTTTTTAGAATACCAGACACCCCAGTATCTGGGGTC GGATCCGATAGAATTTCCCCATTCCTACTCGAATTTTCAAGACCGAGAAATTTCTGGATTTATTGCCGCTTTATTCTCCT ACGGAAACGTCACCTCAATCAAGGAATATCTCCAAAAACTCTTCGCACTTTGTGGAGATTCTCCATATCAATTTCTTTTA AAAGAAGATCTCAAATATATTCGGAATGAACTCAAATCTTATCGCTTTCAAAAACCGGGCGACATATATCTTTTTTTACA AACGATTCAAAACAAACTCCAAAAAACAAAAGATCATAAACTCGAGTCACTTTTTTCCATGCCCCAAGAAGGAGAATTCA AACTCTCTACAAAAGATCGAAAATCGTTTACGGAGGGAGGAACTTTAAGACAAAGAATTCTCGCTTTCCAACTTCGGTTT TTAAAGGAGTCCAGGAAGATCAATAAGAAACAAACGGAAAGTTACGGATATAAGTTTTTAATCGGACAAGGAGTTCGAAC GACCTCTTTAAAAAGATATTCCATGTATCTTCGATGGATGGTTCGAAAAGAATATCCGGATTTCGGAATTTATACAACAA TCTCTCCTTCGGAACTACAATTTCCTTTGGATATTCACATTCAAAGAATTGCAAGCGTTTTACAGATAGGTTCTCGTCAA ACACCGGATTGGAAAAAAGCCGAAGAAATCACGAATTTTTTCCGCGAAATTTTTCCGGATGATCCGGTCAAAGGCGACTT TGCTCTCAGTCGACTGGGAATCCTGAAAAAATGTAAATCAATGTATGATAAGGAGCTCTGTGAAACCTGTAAAATCAATA CGATCTGCAAAATCTACGAAAATAAATTCCTTAAAAAGACGACAAGTTCGAAACCTTAA
Upstream 100 bases:
>100_bases ACCCTGACCTTTTATGGGAAGCGTCCGCTTTTATGGAAAAAGCTCTTTTCAGAGAATTACAGTCAAGAACTTATCTGGCA AATAAAAAGAAAAGAGAATC
Downstream 100 bases:
>100_bases TTGGGTCCGCGCAAGACCTCCGATTCAACTTACAGCTCGTCCCAAAACCCGTCGAGCGCCAATAGAAGCGAGACGGCTTG AGTTTCCTCGAGAGCAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MKHSSQKLKQVLKRIFLEYQTPQYLGSDPIEFPHSYSNFQDREISGFIAALFSYGNVTSIKEYLQKLFALCGDSPYQFLL KEDLKYIRNELKSYRFQKPGDIYLFLQTIQNKLQKTKDHKLESLFSMPQEGEFKLSTKDRKSFTEGGTLRQRILAFQLRF LKESRKINKKQTESYGYKFLIGQGVRTTSLKRYSMYLRWMVRKEYPDFGIYTTISPSELQFPLDIHIQRIASVLQIGSRQ TPDWKKAEEITNFFREIFPDDPVKGDFALSRLGILKKCKSMYDKELCETCKINTICKIYENKFLKKTTSSKP
Sequences:
>Translated_312_residues MKHSSQKLKQVLKRIFLEYQTPQYLGSDPIEFPHSYSNFQDREISGFIAALFSYGNVTSIKEYLQKLFALCGDSPYQFLL KEDLKYIRNELKSYRFQKPGDIYLFLQTIQNKLQKTKDHKLESLFSMPQEGEFKLSTKDRKSFTEGGTLRQRILAFQLRF LKESRKINKKQTESYGYKFLIGQGVRTTSLKRYSMYLRWMVRKEYPDFGIYTTISPSELQFPLDIHIQRIASVLQIGSRQ TPDWKKAEEITNFFREIFPDDPVKGDFALSRLGILKKCKSMYDKELCETCKINTICKIYENKFLKKTTSSKP >Mature_312_residues MKHSSQKLKQVLKRIFLEYQTPQYLGSDPIEFPHSYSNFQDREISGFIAALFSYGNVTSIKEYLQKLFALCGDSPYQFLL KEDLKYIRNELKSYRFQKPGDIYLFLQTIQNKLQKTKDHKLESLFSMPQEGEFKLSTKDRKSFTEGGTLRQRILAFQLRF LKESRKINKKQTESYGYKFLIGQGVRTTSLKRYSMYLRWMVRKEYPDFGIYTTISPSELQFPLDIHIQRIASVLQIGSRQ TPDWKKAEEITNFFREIFPDDPVKGDFALSRLGILKKCKSMYDKELCETCKINTICKIYENKFLKKTTSSKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36821; Mature: 36821
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHSSQKLKQVLKRIFLEYQTPQYLGSDPIEFPHSYSNFQDREISGFIAALFSYGNVTSI CCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHH KEYLQKLFALCGDSPYQFLLKEDLKYIRNELKSYRFQKPGDIYLFLQTIQNKLQKTKDHK HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHH LESLFSMPQEGEFKLSTKDRKSFTEGGTLRQRILAFQLRFLKESRKINKKQTESYGYKFL HHHHHCCCCCCCEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEE IGQGVRTTSLKRYSMYLRWMVRKEYPDFGIYTTISPSELQFPLDIHIQRIASVLQIGSRQ ECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHCCCC TPDWKKAEEITNFFREIFPDDPVKGDFALSRLGILKKCKSMYDKELCETCKINTICKIYE CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH NKFLKKTTSSKP HHHHHHHCCCCC >Mature Secondary Structure MKHSSQKLKQVLKRIFLEYQTPQYLGSDPIEFPHSYSNFQDREISGFIAALFSYGNVTSI CCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHH KEYLQKLFALCGDSPYQFLLKEDLKYIRNELKSYRFQKPGDIYLFLQTIQNKLQKTKDHK HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHH LESLFSMPQEGEFKLSTKDRKSFTEGGTLRQRILAFQLRFLKESRKINKKQTESYGYKFL HHHHHCCCCCCCEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEE IGQGVRTTSLKRYSMYLRWMVRKEYPDFGIYTTISPSELQFPLDIHIQRIASVLQIGSRQ ECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHCCCC TPDWKKAEEITNFFREIFPDDPVKGDFALSRLGILKKCKSMYDKELCETCKINTICKIYE CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH NKFLKKTTSSKP HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA