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The map label for this gene is yahA [C]

Identifier: 116329278

GI number: 116329278

Start: 3226929

End: 3227834

Strand: Reverse

Name: yahA [C]

Synonym: LBL_2723

Alternate gene names: 116329278

Gene position: 3227834-3226929 (Counterclockwise)

Preceding gene: 116329282

Following gene: 116329276

Centisome position: 89.3

GC content: 37.42

Gene sequence:

>906_bases
ATGAAAGAAATTCTTGATCTGTCGTCTAACGTGAATTGGGATTTTCCAAAATCTATTTCAACTTTAGACAAGCGAGTCGC
TCAAAGTCTTTTCTCTTTCAATGAAAAACGTGAAACGGCTCGGAAAATGATTGCGGAGTTTGAAACCGTAACCCCATTTT
CTTCTCCTTCTGAAGAAGACGGTTCTTGCACACGGACTTTTGGCTCAACACTTTTTAAGATATTGACTGATATCTTGAAA
ACTGGGGATTTCCACACGGAGTATCAACCTATTTTGTCTCTGGAAACGGGGAAAGTTTTCGCATACGAAGCTCTGGCACG
ATTTTATGTCGAAGGAAAAAGTATTTCTCCCGAGTTCGTTTTTAACGAACTACATCAGGAAGTGGATTTATTTTTTGAAT
TCGAAAAGAATTTAAAACGGTTTCAGATAAGGAATCGTCCACAAGGGAAGAGATTATTTTTAAACTTGGATCCCCATGTC
TGTAAAAATCGATCGCAGTCGATTGATTGGCACGAGTTTTTAAGCAAGGAAAGGGATATCGTTTGTGAAATCATAGAGAA
TACGGATTCTACTCTGATCGAAGATACTCGATTTTGTTTGGACGCATTAAAGCAATTGAACATTCCGATCGCGCTCGACG
ATGTGGGCGGAAAGAGAAATCTTTTCTGTTTTGATTTTTTAGAATATTCTAAATTTATTAAATTTGACAAATGCTGGCTT
GATCTTTTTAGGACCAAAGCATATTATAAAAATATCGTTTGGGGTTTTTTGGACTTTGCGAGAGAAGCGGACATTCTGTG
TGTTTTGGAGGGAATCGAAACCCAAGAGGATCTTTTGATAGCGGCAGAAATGGGGTTTCCTTTAGTACAGGGTTTTTTAT
TTCAATCAAAAAATCTTGTAGTTTAA

Upstream 100 bases:

>100_bases
TTTTCTCGTTTTTTAGATATCAATTTGATCTTGAGTTTCATTCTCATATTTCTTGACTTTTTCGATCTCTCTTCTACTTT
GGAAACGAAGAGGTCTTACA

Downstream 100 bases:

>100_bases
AAATAATCGCCGAATCGTTTTTTCATTTCCAGGTGGAAAATGATCTCGATGTTCTTCTAAAGAATCGTCTTTGTATCTAT
GGCGGATTTATCCGAAAATG

Product: Signal transduction protein

Products: NA

Alternate protein names: Diguanylate Cyclase/Phosphodiesterase; Signal Transduction Protein; EAL/GGDEF Domain-Containing Protein; EAL Domain-Containing Protein; Eal Domain Protein; EAL Domain Protein; Cellobiose-Specific Phosphotransferase System IIC; EAL Domain Protein Diguanylate Phosphodiesterase; Cyclic Diguanylate Phosphodiesterase Domain Protein; EAL Domain/GGDEF Domain-Containing Protein; EALResponse Regulator Receiver

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MKEILDLSSNVNWDFPKSISTLDKRVAQSLFSFNEKRETARKMIAEFETVTPFSSPSEEDGSCTRTFGSTLFKILTDILK
TGDFHTEYQPILSLETGKVFAYEALARFYVEGKSISPEFVFNELHQEVDLFFEFEKNLKRFQIRNRPQGKRLFLNLDPHV
CKNRSQSIDWHEFLSKERDIVCEIIENTDSTLIEDTRFCLDALKQLNIPIALDDVGGKRNLFCFDFLEYSKFIKFDKCWL
DLFRTKAYYKNIVWGFLDFAREADILCVLEGIETQEDLLIAAEMGFPLVQGFLFQSKNLVV

Sequences:

>Translated_301_residues
MKEILDLSSNVNWDFPKSISTLDKRVAQSLFSFNEKRETARKMIAEFETVTPFSSPSEEDGSCTRTFGSTLFKILTDILK
TGDFHTEYQPILSLETGKVFAYEALARFYVEGKSISPEFVFNELHQEVDLFFEFEKNLKRFQIRNRPQGKRLFLNLDPHV
CKNRSQSIDWHEFLSKERDIVCEIIENTDSTLIEDTRFCLDALKQLNIPIALDDVGGKRNLFCFDFLEYSKFIKFDKCWL
DLFRTKAYYKNIVWGFLDFAREADILCVLEGIETQEDLLIAAEMGFPLVQGFLFQSKNLVV
>Mature_301_residues
MKEILDLSSNVNWDFPKSISTLDKRVAQSLFSFNEKRETARKMIAEFETVTPFSSPSEEDGSCTRTFGSTLFKILTDILK
TGDFHTEYQPILSLETGKVFAYEALARFYVEGKSISPEFVFNELHQEVDLFFEFEKNLKRFQIRNRPQGKRLFLNLDPHV
CKNRSQSIDWHEFLSKERDIVCEIIENTDSTLIEDTRFCLDALKQLNIPIALDDVGGKRNLFCFDFLEYSKFIKFDKCWL
DLFRTKAYYKNIVWGFLDFAREADILCVLEGIETQEDLLIAAEMGFPLVQGFLFQSKNLVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35091; Mature: 35091

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEILDLSSNVNWDFPKSISTLDKRVAQSLFSFNEKRETARKMIAEFETVTPFSSPSEED
CCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GSCTRTFGSTLFKILTDILKTGDFHTEYQPILSLETGKVFAYEALARFYVEGKSISPEFV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCHHHHHHHHHHHHCCCCCCHHHH
FNELHQEVDLFFEFEKNLKRFQIRNRPQGKRLFLNLDPHVCKNRSQSIDWHEFLSKERDI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCCCCCCHHHHHCCCHHH
VCEIIENTDSTLIEDTRFCLDALKQLNIPIALDDVGGKRNLFCFDFLEYSKFIKFDKCWL
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHH
DLFRTKAYYKNIVWGFLDFAREADILCVLEGIETQEDLLIAAEMGFPLVQGFLFQSKNLV
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHEEEEHHCCHHHHHHHHHCCCCCC
V
C
>Mature Secondary Structure
MKEILDLSSNVNWDFPKSISTLDKRVAQSLFSFNEKRETARKMIAEFETVTPFSSPSEED
CCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GSCTRTFGSTLFKILTDILKTGDFHTEYQPILSLETGKVFAYEALARFYVEGKSISPEFV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCHHHHHHHHHHHHCCCCCCHHHH
FNELHQEVDLFFEFEKNLKRFQIRNRPQGKRLFLNLDPHVCKNRSQSIDWHEFLSKERDI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCCCCCCHHHHHCCCHHH
VCEIIENTDSTLIEDTRFCLDALKQLNIPIALDDVGGKRNLFCFDFLEYSKFIKFDKCWL
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHH
DLFRTKAYYKNIVWGFLDFAREADILCVLEGIETQEDLLIAAEMGFPLVQGFLFQSKNLV
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHEEEEHHCCHHHHHHHHHCCCCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA