| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116329253
Identifier: 116329253
GI number: 116329253
Start: 3191224
End: 3191988
Strand: Reverse
Name: 116329253
Synonym: LBL_2692
Alternate gene names: NA
Gene position: 3191988-3191224 (Counterclockwise)
Preceding gene: 116329254
Following gene: 116329252
Centisome position: 88.31
GC content: 37.91
Gene sequence:
>765_bases ATGGAGCCGTTCAAACCTAAACCTTTACTGAATAAGTCGGAACTACGACAAATCAAAAAATCCAGAACGAGGGTTGAGGG CAAAAAAGTAATCACGGACGATGTTAAGAAATTAAAGTCCTTAAACGTAACTCCCGATCTTCCCAAAGGGGAACTCGTTC ATTATTATAAAGAACCGATTTGGATCGAATATTATATTCCCCGAGAATCCAGATTCGCTTACGAAGTGAAATATTTGTTC GTAAAGTTAATCGATCCGATTCCAAGACCCGCAGACGCGATTTTAAAAGATGCAATTTCCAAAGGAGAATTTGTAGACGT TTTAGACGTGATGTTTCGTTATCCGGAAAAAGAAACTCTAATTCGAAACAGTTATATAAATACCTTTTCTTTTTTGGAAT CGATATCAGCCAATTACAAACAGTACTTAAAAACAAACGACCCCTACGATTTGAGGATTCCTTTATTTCATACGGAAGCC TTGATGAAATGGGAGCCTACGGTCGCTACTCTGGAATTTTTGGGGCCTTACACAATTTATAATCTTAACTGGCTGATTCG AAAACTTAACGAAGCAGAAGAGGAATTTTCACTTGAAGACGAAACGATTTCCGTGTTGATTAAACGAAGAAACGAATATT GGGAAGAAAATTCGCGCCCGACCGATGAAGATTTTGAATTGTTTGCTGCATTATTTTATGAACAGGCTTTTCCGCACAGA GGTTCTGAATTCGAAGATGGTCTACTTTTAAAAGAGACCGATTAG
Upstream 100 bases:
>100_bases TTCCATTTGAAGGAAGTGGTTCCTATCGACGTTGTGTACGTAGATTTTATGGTAGATTTTGAATTTAGATTCGATTTCTT CAAAACCGATATTATATATT
Downstream 100 bases:
>100_bases GAAAACTTTAATTTTGAACTTGTCCCAAAATCTTAGAATGTAAGAACTCTTTTTGATTCTACTACGGACGAAGCTTGTTT GTTTCATAAGTTTAAACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MEPFKPKPLLNKSELRQIKKSRTRVEGKKVITDDVKKLKSLNVTPDLPKGELVHYYKEPIWIEYYIPRESRFAYEVKYLF VKLIDPIPRPADAILKDAISKGEFVDVLDVMFRYPEKETLIRNSYINTFSFLESISANYKQYLKTNDPYDLRIPLFHTEA LMKWEPTVATLEFLGPYTIYNLNWLIRKLNEAEEEFSLEDETISVLIKRRNEYWEENSRPTDEDFELFAALFYEQAFPHR GSEFEDGLLLKETD
Sequences:
>Translated_254_residues MEPFKPKPLLNKSELRQIKKSRTRVEGKKVITDDVKKLKSLNVTPDLPKGELVHYYKEPIWIEYYIPRESRFAYEVKYLF VKLIDPIPRPADAILKDAISKGEFVDVLDVMFRYPEKETLIRNSYINTFSFLESISANYKQYLKTNDPYDLRIPLFHTEA LMKWEPTVATLEFLGPYTIYNLNWLIRKLNEAEEEFSLEDETISVLIKRRNEYWEENSRPTDEDFELFAALFYEQAFPHR GSEFEDGLLLKETD >Mature_254_residues MEPFKPKPLLNKSELRQIKKSRTRVEGKKVITDDVKKLKSLNVTPDLPKGELVHYYKEPIWIEYYIPRESRFAYEVKYLF VKLIDPIPRPADAILKDAISKGEFVDVLDVMFRYPEKETLIRNSYINTFSFLESISANYKQYLKTNDPYDLRIPLFHTEA LMKWEPTVATLEFLGPYTIYNLNWLIRKLNEAEEEFSLEDETISVLIKRRNEYWEENSRPTDEDFELFAALFYEQAFPHR GSEFEDGLLLKETD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30214; Mature: 30214
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPFKPKPLLNKSELRQIKKSRTRVEGKKVITDDVKKLKSLNVTPDLPKGELVHYYKEPI CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCE WIEYYIPRESRFAYEVKYLFVKLIDPIPRPADAILKDAISKGEFVDVLDVMFRYPEKETL EEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH IRNSYINTFSFLESISANYKQYLKTNDPYDLRIPLFHTEALMKWEPTVATLEFLGPYTIY HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHCCCCCHHHHHHCCCCCEE NLNWLIRKLNEAEEEFSLEDETISVLIKRRNEYWEENSRPTDEDFELFAALFYEQAFPHR HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC GSEFEDGLLLKETD CCCCCCCEEEEECC >Mature Secondary Structure MEPFKPKPLLNKSELRQIKKSRTRVEGKKVITDDVKKLKSLNVTPDLPKGELVHYYKEPI CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCE WIEYYIPRESRFAYEVKYLFVKLIDPIPRPADAILKDAISKGEFVDVLDVMFRYPEKETL EEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH IRNSYINTFSFLESISANYKQYLKTNDPYDLRIPLFHTEALMKWEPTVATLEFLGPYTIY HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHCCCCCHHHHHHCCCCCEE NLNWLIRKLNEAEEEFSLEDETISVLIKRRNEYWEENSRPTDEDFELFAALFYEQAFPHR HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC GSEFEDGLLLKETD CCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA