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The map label for this gene is sbcC

Identifier: 116329017

GI number: 116329017

Start: 2870287

End: 2872602

Strand: Direct

Name: sbcC

Synonym: LBL_2421

Alternate gene names: NA

Gene position: 2870287-2872602 (Clockwise)

Preceding gene: 116329016

Following gene: 116329027

Centisome position: 79.41

GC content: 40.2

Gene sequence:

>2316_bases
ATGATCTCGGGAATTCAATTGAACCGATTCGGCAAATTTGTCCGAAAAGAATTTAATCTTTCGGACACAGTCACCGTCTT
TTTCGGCAAAAACGAATCCGGAAAAACCACGATCTTCGACGCGCTCCGACTCGCAATCGGCAGCAAATTTCTTACTGCAA
ATCAAGAACCAAAAAAAAGTATTCTTTCGCGTTACGGTGAAAAAAGTTTAGACGGTTATAATATTCTAGGCAACGTTCCC
GACCTTTCCAAGGAAACGGCTCCTCAGTACGTACACTGCGTTTCTCTCAGAGAAGGTGAATTAGAGTTTGCGTTTAACAA
CGACAAGTTCATCAAACCCGATTTTCTCCGAAGCAAACTTCTAAATAACGGGATCGACTTGGATGGAATTGCAAGTTCGC
TCAAAAGGATCCATTCTCCGAAAACGGGAAGTAAGGACTCGAATCTTTTCGAAACTTTGAAAAAAGAAATTTCGGATCTT
AAATCAAAAAGAACCGAACTGATTTTCGAAATCGAAAGCCTACATTCCAGAAACAAAAACAACGCCGAAAAAGAGGAAAA
ACATCTCAAAGACCGAAACAGAGAATTTGAAATCAAAGATAAACTCGCCGAAATCGAAAAAGATTCCGAATTGGATTCTA
AAATTCAAAAAAAGATCAAACTTTTGGAATGTCTTTCCGAGATTCAAAGACTAAAATCCATTCAAGAATTCATCAAGAAA
AACTTTCTTTATGCAAAGGACGAATCTTCCGCTTTCGAAAACCTTCAAAAAGAAATCGAAAAATCCCGAAACGCCGTCCA
CTCTTCCGAAACATTGCTCAGGGACAAAGAAAATGCAATGAATTCCAAAAAGAAACATTTAGACGAACGACAAAACCTAC
TCCCAACCCTCCAAAAGATGAAACAAAAGGCGGAGGAATGGTGCGAAAAAATCGACAATACACTCCGGGAAGAGGGTTTT
ATCGAAGAAATTCGAACGAATCACTCCAGTTCCTCCGGTAAAATCCTAGGAATTATTTTAGTCGGACTCGGTTTTTTAGG
ACTTGTCGGCGCCTTCAGCGGATTTTTACTTTCCAAATTCTCAACCGCCACACTGTTCAGCGCAGCCTTGATTTCCGCAA
GTTTGATCGTTCTCGGTTTTTTTCTCTTCCTACAAAAAAGGGAATCCGTCAATTTCAGATATAGTTCCGAAAAGGAAAAG
GGCTTTGTTCTCAAAATCTCCGGCCTATGGAACTTAACATTTCCGGAATATTCTATTCCCTTTATAGAAAAGATCGATCA
TCTAAGACAGTTTTTTCTAAAACAAATCCAAAATTTCGATATAGAATCGCGCCAGATAGAAACCTTGGAAAAAGAAATCC
GTACATTGTCAACCGAGCTCGACACGATTCGTTCTACCTTAAGACTCGAATCCGAGAAGTCCGCAGGACTTCAATCCAAA
ATAAATTCCTGGTTGAACGATAGAAAAGCGGTCACCATCCAAGACTACCACAAACAAGTCGCGGAACTCCAAGCCCAATC
CAGAAATTTTTCCGAAGGTCTGAAAAAAATTCTCACAGATCACTCCGCCAAAAGTTTGGAAGATCTGGAAATTCGGCAAA
AAACTACGATCGCAACTATGGACGACGTTCCGATCCGATTCCCGAATGATCCCCAAAGACCATTCAGAGATTCCAAAAAA
AAGGAACTCGAAAAAGAACTTCGATCCCTGGAAAATAAATTAAAAGAATTGAATATCGCAATTCAAGTGGAAGAGTCTCG
GATTCAGGATTCTCTTCCCGAAAAGGAAAAGGATCTGATTCGTACGATCCAAACCCTTTCCGAAAAAGAATTATATTTTT
CTAATATTATTTCCAAACGCAGATCCGCAATATTCGCCCAGGAACTCGTCGAAGAAATCTCCAAGGATCAATCCGCCCAG
TTCTCGTTCGTATCTTCCGAAGTCGGCAAGGAAATCAACTTTGTACTTCCGAAACGGGAAATCTCCTTCGAATCCATCGA
CAAAAAAGAATCGATTAAAATGAAGGACCGATCCGGAGAATTCAGACCCATCGATCATCTCTCGGGTGGAACATTAGCGA
CTTTCTATCTGATTTTCAAGCTCTTCTTGGCTCGCAAAACCGTTCCGAAACACGGAATTCTCTTGTTAGACGAACCTTTT
GTTCATCTAGATACGGAAAGAATCAATTCTGCCCTTTCCTATCTCAAGGCCTTTCAGGAAGAAACTGGGTATCAAATCTG
TTTTTTTACAAAGCAGGAAGAACTCGCGGAAATCGTTCTTAAGATTTTTCAAAATTCGACAAAGATCCCTTTGTAA

Upstream 100 bases:

>100_bases
TTCAAAAAGAGGAATTGGAACACTCCGGACGCTCCCGATTGGAACGAAATTTTGGTCTTAGGCCTTGAACAAATTGAAGA
ACATTCGGGGAGAAATTAAA

Downstream 100 bases:

>100_bases
AATCGATCCAAGGTTGTCTAACATAAGTTCTATTTTTTGAGACGCGCTCTTTAGGTCGAATTTCACATTCAATAACCGAT
CCGCAAGAAATCACCTTGTA

Product: DNA repair ATPase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 771; Mature: 771

Protein sequence:

>771_residues
MISGIQLNRFGKFVRKEFNLSDTVTVFFGKNESGKTTIFDALRLAIGSKFLTANQEPKKSILSRYGEKSLDGYNILGNVP
DLSKETAPQYVHCVSLREGELEFAFNNDKFIKPDFLRSKLLNNGIDLDGIASSLKRIHSPKTGSKDSNLFETLKKEISDL
KSKRTELIFEIESLHSRNKNNAEKEEKHLKDRNREFEIKDKLAEIEKDSELDSKIQKKIKLLECLSEIQRLKSIQEFIKK
NFLYAKDESSAFENLQKEIEKSRNAVHSSETLLRDKENAMNSKKKHLDERQNLLPTLQKMKQKAEEWCEKIDNTLREEGF
IEEIRTNHSSSSGKILGIILVGLGFLGLVGAFSGFLLSKFSTATLFSAALISASLIVLGFFLFLQKRESVNFRYSSEKEK
GFVLKISGLWNLTFPEYSIPFIEKIDHLRQFFLKQIQNFDIESRQIETLEKEIRTLSTELDTIRSTLRLESEKSAGLQSK
INSWLNDRKAVTIQDYHKQVAELQAQSRNFSEGLKKILTDHSAKSLEDLEIRQKTTIATMDDVPIRFPNDPQRPFRDSKK
KELEKELRSLENKLKELNIAIQVEESRIQDSLPEKEKDLIRTIQTLSEKELYFSNIISKRRSAIFAQELVEEISKDQSAQ
FSFVSSEVGKEINFVLPKREISFESIDKKESIKMKDRSGEFRPIDHLSGGTLATFYLIFKLFLARKTVPKHGILLLDEPF
VHLDTERINSALSYLKAFQEETGYQICFFTKQEELAEIVLKIFQNSTKIPL

Sequences:

>Translated_771_residues
MISGIQLNRFGKFVRKEFNLSDTVTVFFGKNESGKTTIFDALRLAIGSKFLTANQEPKKSILSRYGEKSLDGYNILGNVP
DLSKETAPQYVHCVSLREGELEFAFNNDKFIKPDFLRSKLLNNGIDLDGIASSLKRIHSPKTGSKDSNLFETLKKEISDL
KSKRTELIFEIESLHSRNKNNAEKEEKHLKDRNREFEIKDKLAEIEKDSELDSKIQKKIKLLECLSEIQRLKSIQEFIKK
NFLYAKDESSAFENLQKEIEKSRNAVHSSETLLRDKENAMNSKKKHLDERQNLLPTLQKMKQKAEEWCEKIDNTLREEGF
IEEIRTNHSSSSGKILGIILVGLGFLGLVGAFSGFLLSKFSTATLFSAALISASLIVLGFFLFLQKRESVNFRYSSEKEK
GFVLKISGLWNLTFPEYSIPFIEKIDHLRQFFLKQIQNFDIESRQIETLEKEIRTLSTELDTIRSTLRLESEKSAGLQSK
INSWLNDRKAVTIQDYHKQVAELQAQSRNFSEGLKKILTDHSAKSLEDLEIRQKTTIATMDDVPIRFPNDPQRPFRDSKK
KELEKELRSLENKLKELNIAIQVEESRIQDSLPEKEKDLIRTIQTLSEKELYFSNIISKRRSAIFAQELVEEISKDQSAQ
FSFVSSEVGKEINFVLPKREISFESIDKKESIKMKDRSGEFRPIDHLSGGTLATFYLIFKLFLARKTVPKHGILLLDEPF
VHLDTERINSALSYLKAFQEETGYQICFFTKQEELAEIVLKIFQNSTKIPL
>Mature_771_residues
MISGIQLNRFGKFVRKEFNLSDTVTVFFGKNESGKTTIFDALRLAIGSKFLTANQEPKKSILSRYGEKSLDGYNILGNVP
DLSKETAPQYVHCVSLREGELEFAFNNDKFIKPDFLRSKLLNNGIDLDGIASSLKRIHSPKTGSKDSNLFETLKKEISDL
KSKRTELIFEIESLHSRNKNNAEKEEKHLKDRNREFEIKDKLAEIEKDSELDSKIQKKIKLLECLSEIQRLKSIQEFIKK
NFLYAKDESSAFENLQKEIEKSRNAVHSSETLLRDKENAMNSKKKHLDERQNLLPTLQKMKQKAEEWCEKIDNTLREEGF
IEEIRTNHSSSSGKILGIILVGLGFLGLVGAFSGFLLSKFSTATLFSAALISASLIVLGFFLFLQKRESVNFRYSSEKEK
GFVLKISGLWNLTFPEYSIPFIEKIDHLRQFFLKQIQNFDIESRQIETLEKEIRTLSTELDTIRSTLRLESEKSAGLQSK
INSWLNDRKAVTIQDYHKQVAELQAQSRNFSEGLKKILTDHSAKSLEDLEIRQKTTIATMDDVPIRFPNDPQRPFRDSKK
KELEKELRSLENKLKELNIAIQVEESRIQDSLPEKEKDLIRTIQTLSEKELYFSNIISKRRSAIFAQELVEEISKDQSAQ
FSFVSSEVGKEINFVLPKREISFESIDKKESIKMKDRSGEFRPIDHLSGGTLATFYLIFKLFLARKTVPKHGILLLDEPF
VHLDTERINSALSYLKAFQEETGYQICFFTKQEELAEIVLKIFQNSTKIPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88862; Mature: 88862

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGIQLNRFGKFVRKEFNLSDTVTVFFGKNESGKTTIFDALRLAIGSKFLTANQEPKKS
CCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCHHHCCCCCHHHH
ILSRYGEKSLDGYNILGNVPDLSKETAPQYVHCVSLREGELEFAFNNDKFIKPDFLRSKL
HHHHCCCCCCCCCEECCCCCCCCHHCCCHHEEEEEECCCCEEEEECCCCCCCHHHHHHHH
LNNGIDLDGIASSLKRIHSPKTGSKDSNLFETLKKEISDLKSKRTELIFEIESLHSRNKN
HHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NAEKEEKHLKDRNREFEIKDKLAEIEKDSELDSKIQKKIKLLECLSEIQRLKSIQEFIKK
CHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFLYAKDESSAFENLQKEIEKSRNAVHSSETLLRDKENAMNSKKKHLDERQNLLPTLQKM
CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQKAEEWCEKIDNTLREEGFIEEIRTNHSSSSGKILGIILVGLGFLGLVGAFSGFLLSKF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
STATLFSAALISASLIVLGFFLFLQKRESVNFRYSSEKEKGFVLKISGLWNLTFPEYSIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEECEEEECCCCCCCC
FIEKIDHLRQFFLKQIQNFDIESRQIETLEKEIRTLSTELDTIRSTLRLESEKSAGLQSK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHH
INSWLNDRKAVTIQDYHKQVAELQAQSRNFSEGLKKILTDHSAKSLEDLEIRQKTTIATM
HHHHHCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEE
DDVPIRFPNDPQRPFRDSKKKELEKELRSLENKLKELNIAIQVEESRIQDSLPEKEKDLI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHCCCHHHHHHH
RTIQTLSEKELYFSNIISKRRSAIFAQELVEEISKDQSAQFSFVSSEVGKEINFVLPKRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCC
ISFESIDKKESIKMKDRSGEFRPIDHLSGGTLATFYLIFKLFLARKTVPKHGILLLDEPF
CCHHHCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
VHLDTERINSALSYLKAFQEETGYQICFFTKQEELAEIVLKIFQNSTKIPL
CCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MISGIQLNRFGKFVRKEFNLSDTVTVFFGKNESGKTTIFDALRLAIGSKFLTANQEPKKS
CCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCHHHCCCCCHHHH
ILSRYGEKSLDGYNILGNVPDLSKETAPQYVHCVSLREGELEFAFNNDKFIKPDFLRSKL
HHHHCCCCCCCCCEECCCCCCCCHHCCCHHEEEEEECCCCEEEEECCCCCCCHHHHHHHH
LNNGIDLDGIASSLKRIHSPKTGSKDSNLFETLKKEISDLKSKRTELIFEIESLHSRNKN
HHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NAEKEEKHLKDRNREFEIKDKLAEIEKDSELDSKIQKKIKLLECLSEIQRLKSIQEFIKK
CHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFLYAKDESSAFENLQKEIEKSRNAVHSSETLLRDKENAMNSKKKHLDERQNLLPTLQKM
CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQKAEEWCEKIDNTLREEGFIEEIRTNHSSSSGKILGIILVGLGFLGLVGAFSGFLLSKF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
STATLFSAALISASLIVLGFFLFLQKRESVNFRYSSEKEKGFVLKISGLWNLTFPEYSIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEECEEEECCCCCCCC
FIEKIDHLRQFFLKQIQNFDIESRQIETLEKEIRTLSTELDTIRSTLRLESEKSAGLQSK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHH
INSWLNDRKAVTIQDYHKQVAELQAQSRNFSEGLKKILTDHSAKSLEDLEIRQKTTIATM
HHHHHCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEE
DDVPIRFPNDPQRPFRDSKKKELEKELRSLENKLKELNIAIQVEESRIQDSLPEKEKDLI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHCCCHHHHHHH
RTIQTLSEKELYFSNIISKRRSAIFAQELVEEISKDQSAQFSFVSSEVGKEINFVLPKRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCC
ISFESIDKKESIKMKDRSGEFRPIDHLSGGTLATFYLIFKLFLARKTVPKHGILLLDEPF
CCHHHCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
VHLDTERINSALSYLKAFQEETGYQICFFTKQEELAEIVLKIFQNSTKIPL
CCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA