| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116328943
Identifier: 116328943
GI number: 116328943
Start: 2773932
End: 2774555
Strand: Direct
Name: 116328943
Synonym: LBL_2339
Alternate gene names: NA
Gene position: 2773932-2774555 (Clockwise)
Preceding gene: 116328940
Following gene: 116328944
Centisome position: 76.75
GC content: 42.47
Gene sequence:
>624_bases ATGAAAAAGACATTTACGATCTTACTTATCATGGGACTTTTTTTCTCTTCTTGTGAAGATAAGAAAAAAGAAGACGGCTC CATTACGGGAAATTCAGTCACGGATTTGTCGTTGCTTTTGAGCTTGTCCTCAGGGACACACCCGAATCAATCTTCAAATC CATGCCCAACTAACGTAACAATATCAACCTCCGATACAATTACACAAATAGGTTCTTCAATCAATCCTCTGGGGATTCAA TTTGTAGCAACGAACTCCTCGGGTTCCGCCATTTCAAATTCTACAATAATAGCGAATCGGAATTGTCAATTTAGTAATTA TACGGCCACGAATCTTCCGGCAGGTTTAAGCATCAGCTCTAATACCGGCGCTATAAGTGGAATTCCGACTGCGGCAGGAC CCGCTGCGGTCACACTGTCCGTTACGTTCAAACCCAATAACACGCCAGCCGTTATATTAACAAAAATAATGAATATGACC GTACATGCAGCGGGTGATTTAACTTGCAACACAGTGGGAATCTCTAATGGCTGCACCGGGGCAAATCCTTTTTCTTGCAC TAACTCGAACAGCTGTTGGACTTCGTATTCCAGTTGTAAAGTGGATTCTGCTTGCGGATATTAA
Upstream 100 bases:
>100_bases TTTTTTTTATACAAATATCACAAACAAAATCATACCGTCCACAGAAATAACACGCGTTTATTTTACAAAAGAGTACAAAA CCTAAAAAAGGACAAAATAA
Downstream 100 bases:
>100_bases GACAAAATGGCGCCCCTTCTGGGCTTGAAAAACGTGGGTTATATGCGAGCATTTACCACAAAACAAGAAAACCAACAGAA GGAACGCAATGAAAAGAAAA
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MKKTFTILLIMGLFFSSCEDKKKEDGSITGNSVTDLSLLLSLSSGTHPNQSSNPCPTNVTISTSDTITQIGSSINPLGIQ FVATNSSGSAISNSTIIANRNCQFSNYTATNLPAGLSISSNTGAISGIPTAAGPAAVTLSVTFKPNNTPAVILTKIMNMT VHAAGDLTCNTVGISNGCTGANPFSCTNSNSCWTSYSSCKVDSACGY
Sequences:
>Translated_207_residues MKKTFTILLIMGLFFSSCEDKKKEDGSITGNSVTDLSLLLSLSSGTHPNQSSNPCPTNVTISTSDTITQIGSSINPLGIQ FVATNSSGSAISNSTIIANRNCQFSNYTATNLPAGLSISSNTGAISGIPTAAGPAAVTLSVTFKPNNTPAVILTKIMNMT VHAAGDLTCNTVGISNGCTGANPFSCTNSNSCWTSYSSCKVDSACGY >Mature_207_residues MKKTFTILLIMGLFFSSCEDKKKEDGSITGNSVTDLSLLLSLSSGTHPNQSSNPCPTNVTISTSDTITQIGSSINPLGIQ FVATNSSGSAISNSTIIANRNCQFSNYTATNLPAGLSISSNTGAISGIPTAAGPAAVTLSVTFKPNNTPAVILTKIMNMT VHAAGDLTCNTVGISNGCTGANPFSCTNSNSCWTSYSSCKVDSACGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21229; Mature: 21229
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTFTILLIMGLFFSSCEDKKKEDGSITGNSVTDLSLLLSLSSGTHPNQSSNPCPTNVT CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEEEEECCCCCCCCCCCCCCCEEE ISTSDTITQIGSSINPLGIQFVATNSSGSAISNSTIIANRNCQFSNYTATNLPAGLSISS EECCHHHHHHCCCCCCCEEEEEEECCCCCEECCCEEEECCCCCCCCCCCCCCCCCCEECC NTGAISGIPTAAGPAAVTLSVTFKPNNTPAVILTKIMNMTVHAAGDLTCNTVGISNGCTG CCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHEEHHHHHEEEECCCEEEEEEECCCCCCC ANPFSCTNSNSCWTSYSSCKVDSACGY CCCCCCCCCCCCEECCCCCCCCCCCCC >Mature Secondary Structure MKKTFTILLIMGLFFSSCEDKKKEDGSITGNSVTDLSLLLSLSSGTHPNQSSNPCPTNVT CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEEEEECCCCCCCCCCCCCCCEEE ISTSDTITQIGSSINPLGIQFVATNSSGSAISNSTIIANRNCQFSNYTATNLPAGLSISS EECCHHHHHHCCCCCCCEEEEEEECCCCCEECCCEEEECCCCCCCCCCCCCCCCCCEECC NTGAISGIPTAAGPAAVTLSVTFKPNNTPAVILTKIMNMTVHAAGDLTCNTVGISNGCTG CCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHEEHHHHHEEEECCCEEEEEEECCCCCCC ANPFSCTNSNSCWTSYSSCKVDSACGY CCCCCCCCCCCCEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA