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The map label for this gene is yxjL [H]

Identifier: 116328918

GI number: 116328918

Start: 2737434

End: 2738135

Strand: Direct

Name: yxjL [H]

Synonym: LBL_2312

Alternate gene names: 116328918

Gene position: 2737434-2738135 (Clockwise)

Preceding gene: 116328917

Following gene: 116328919

Centisome position: 75.74

GC content: 41.17

Gene sequence:

>702_bases
ATGATACATTCGAAAATTTCACAAAAAACCAAACCCCCTTATTTGGTTTCCATCATCGAAGACAATCGACACACTGCCCT
CAATCTTCAGGAACTTCTTTCCAATTCCTCCGATTTTCAATTTTTAAGGCATTATCCCAACTCTCAAAAAGCGATCGAAG
ATATTCCGGAAAATATTCCCGATATCGTAATCTTAGATATAGGACTTCCCGGAAAGAACGGATTGGAATGTCTCAAAGAG
CTTAAAGAAAAAACGCCTAACACTAAATATGTGATCTTCACCGTTTTTGAAGACGAAGAAAAAATAGTGGAAGCGATCCA
AGGAGGGGTATCCGGCTATCTCTTGAAGGACACTCCTCCCGAACTGTTCCTTGCCGAACTCAAAGTTATCATACTGGGAG
GCGCTTCACTTACTCCTAGAATTGCGGACAAGATCATCCGAGAATTCACAAAAAAAGAGGAAAATCAAAATCCGCCGATC
CAAAATACCCTGGGACTTACAAAAAGGCAACTTCAGATTCTCAATTTCGTAGCGCTTGGAATGACCGTTGCAGATATCGC
GGACGAACTCGATATTTCCAGCCATACGGTCAGTAGACATATCGAAAAAATTTATAAAAAGATGGAAGTGCATTCCAAAT
CCGAAGCCATCATCCGAGGAAGAAGAATGGGGATTATACGAGACGTTCCAGGATACCCTTAA

Upstream 100 bases:

>100_bases
CGTTTTAGCTCCGCAATTTAAGAATTTACTTTTAGTAAACAAAATGAACGCGAGTAAAAAACAATTTACCAATCGAAACG
AATTCGTATAATCAAAGTCG

Downstream 100 bases:

>100_bases
ATGCCCGCAAAGAGAATATTCGTATTTTCTATTTTTATTATATTTACCTTGTTTTCGACGGGATGCAGCTCCAAGAACGA
GCCAATCGCGGAAAAAGGCG

Product: receiver component of a two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MIHSKISQKTKPPYLVSIIEDNRHTALNLQELLSNSSDFQFLRHYPNSQKAIEDIPENIPDIVILDIGLPGKNGLECLKE
LKEKTPNTKYVIFTVFEDEEKIVEAIQGGVSGYLLKDTPPELFLAELKVIILGGASLTPRIADKIIREFTKKEENQNPPI
QNTLGLTKRQLQILNFVALGMTVADIADELDISSHTVSRHIEKIYKKMEVHSKSEAIIRGRRMGIIRDVPGYP

Sequences:

>Translated_233_residues
MIHSKISQKTKPPYLVSIIEDNRHTALNLQELLSNSSDFQFLRHYPNSQKAIEDIPENIPDIVILDIGLPGKNGLECLKE
LKEKTPNTKYVIFTVFEDEEKIVEAIQGGVSGYLLKDTPPELFLAELKVIILGGASLTPRIADKIIREFTKKEENQNPPI
QNTLGLTKRQLQILNFVALGMTVADIADELDISSHTVSRHIEKIYKKMEVHSKSEAIIRGRRMGIIRDVPGYP
>Mature_233_residues
MIHSKISQKTKPPYLVSIIEDNRHTALNLQELLSNSSDFQFLRHYPNSQKAIEDIPENIPDIVILDIGLPGKNGLECLKE
LKEKTPNTKYVIFTVFEDEEKIVEAIQGGVSGYLLKDTPPELFLAELKVIILGGASLTPRIADKIIREFTKKEENQNPPI
QNTLGLTKRQLQILNFVALGMTVADIADELDISSHTVSRHIEKIYKKMEVHSKSEAIIRGRRMGIIRDVPGYP

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1787473, Length=212, Percent_Identity=33.4905660377358, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1790102, Length=209, Percent_Identity=30.1435406698565, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1788521, Length=206, Percent_Identity=27.1844660194175, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1788222, Length=200, Percent_Identity=22, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI1786747, Length=191, Percent_Identity=25.6544502617801, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 26294; Mature: 26294

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHSKISQKTKPPYLVSIIEDNRHTALNLQELLSNSSDFQFLRHYPNSQKAIEDIPENIP
CCCCHHHHCCCCCEEEEEEECCCCCEECHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCC
DIVILDIGLPGKNGLECLKELKEKTPNTKYVIFTVFEDEEKIVEAIQGGVSGYLLKDTPP
CEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHCCCCEEEECCCCH
ELFLAELKVIILGGASLTPRIADKIIREFTKKEENQNPPIQNTLGLTKRQLQILNFVALG
HHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
MTVADIADELDISSHTVSRHIEKIYKKMEVHSKSEAIIRGRRMGIIRDVPGYP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIHSKISQKTKPPYLVSIIEDNRHTALNLQELLSNSSDFQFLRHYPNSQKAIEDIPENIP
CCCCHHHHCCCCCEEEEEEECCCCCEECHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCC
DIVILDIGLPGKNGLECLKELKEKTPNTKYVIFTVFEDEEKIVEAIQGGVSGYLLKDTPP
CEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHCCCCEEEECCCCH
ELFLAELKVIILGGASLTPRIADKIIREFTKKEENQNPPIQNTLGLTKRQLQILNFVALG
HHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
MTVADIADELDISSHTVSRHIEKIYKKMEVHSKSEAIIRGRRMGIIRDVPGYP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]