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The map label for this gene is yfcI [H]

Identifier: 116328896

GI number: 116328896

Start: 2707537

End: 2708451

Strand: Reverse

Name: yfcI [H]

Synonym: LBL_2287

Alternate gene names: 116328896

Gene position: 2708451-2707537 (Counterclockwise)

Preceding gene: 116328897

Following gene: 116328894

Centisome position: 74.93

GC content: 39.02

Gene sequence:

>915_bases
ATGACCGAAGTGAACAACCCTCACGATCGACTGATCCGAGAAACCTTTCAGGACAAAAAAGAGGCGGCTACTTTTTTTAA
AAACACGTTACCGCCGGAAGTGGTCGAACTACTCGACTTGGAAAACTTAGAATTGACCGAATCAAGTTTTGTATCCGAGG
AACTAAAACAAGAACAAACGGATCTGTTGTTTCAAATCCCACTCAAGTCCGGAAACAAGTCGAACGTGTATTTACTTTTC
GAACACAAAAGTTATTTAGAAAACACCATCTATATTCAATTATTAGGATATTTAACGGAAATCTATCGAAACCAACAAAG
AAGCGGGGAATCTTTTTCCGTAGTCATTCCGTTCGTATTCTATCATGGAGAAAAGGAATGGAAATTGGGAGATCGATTTT
CGGATCAGTTCGTATTAACAAAACAAGAAACGGACGTGTTTCAGGACTTTATTCCCGATTTTAAAATAGACTTGTTCGAT
TTGGAAGGGATAGAATTGAAGAAGAAGTTAGAAAGTATTACTTTTCAAGTCACTCTGGGAGTTGTTCAAAGAATCCGGGA
AAGAGATTTGGAATTCGTTTCTCACCTGCCGGGGTTATTTTCCCTATTACTTGGAATCGAGGAAGAATCGAAAAGGGTTG
CAATCCTACGGAAACTGTTGTTGTATATTTATTGGGCCCGTGATTTAAAACCTACGGAACTCAAAAGAGTTTTGGCAATA
TCGAAATTGGAACAATACGAGGAGTTAACGATGACTACAGCGGAGAGACTCATTTCAGAAGGCATACAACAAGGAAAGAT
TGAAGGCAAGATTGAAACGGCTCGAAATATGCTTTCCGAGGATATTCAGCTAGAAGCAGTTCTTCGTATCACTGGTCTTT
CTAAACAAGATTTAAAAGACCACGGAGTGATTTAG

Upstream 100 bases:

>100_bases
CTGTCCTGAAATCTGAAAAATGTAGGTTTTTTAAGTTTTGAACTTGAGATGGATTCCCGAATGGAATTGACCGAGCAAAA
CGATAACCCCAAGATAACGG

Downstream 100 bases:

>100_bases
TCTATGTTCTTCAGTAGCATGTAGCACTTTTTACTCCTCATTTCGTTCATCAAGCGGTCTGGTTTCTATAAACTTGATTT
TAGAACTTTATGGTTTTTAA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTEVNNPHDRLIRETFQDKKEAATFFKNTLPPEVVELLDLENLELTESSFVSEELKQEQTDLLFQIPLKSGNKSNVYLLF
EHKSYLENTIYIQLLGYLTEIYRNQQRSGESFSVVIPFVFYHGEKEWKLGDRFSDQFVLTKQETDVFQDFIPDFKIDLFD
LEGIELKKKLESITFQVTLGVVQRIRERDLEFVSHLPGLFSLLLGIEEESKRVAILRKLLLYIYWARDLKPTELKRVLAI
SKLEQYEELTMTTAERLISEGIQQGKIEGKIETARNMLSEDIQLEAVLRITGLSKQDLKDHGVI

Sequences:

>Translated_304_residues
MTEVNNPHDRLIRETFQDKKEAATFFKNTLPPEVVELLDLENLELTESSFVSEELKQEQTDLLFQIPLKSGNKSNVYLLF
EHKSYLENTIYIQLLGYLTEIYRNQQRSGESFSVVIPFVFYHGEKEWKLGDRFSDQFVLTKQETDVFQDFIPDFKIDLFD
LEGIELKKKLESITFQVTLGVVQRIRERDLEFVSHLPGLFSLLLGIEEESKRVAILRKLLLYIYWARDLKPTELKRVLAI
SKLEQYEELTMTTAERLISEGIQQGKIEGKIETARNMLSEDIQLEAVLRITGLSKQDLKDHGVI
>Mature_303_residues
TEVNNPHDRLIRETFQDKKEAATFFKNTLPPEVVELLDLENLELTESSFVSEELKQEQTDLLFQIPLKSGNKSNVYLLFE
HKSYLENTIYIQLLGYLTEIYRNQQRSGESFSVVIPFVFYHGEKEWKLGDRFSDQFVLTKQETDVFQDFIPDFKIDLFDL
EGIELKKKLESITFQVTLGVVQRIRERDLEFVSHLPGLFSLLLGIEEESKRVAILRKLLLYIYWARDLKPTELKRVLAIS
KLEQYEELTMTTAERLISEGIQQGKIEGKIETARNMLSEDIQLEAVLRITGLSKQDLKDHGVI

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1788643, Length=306, Percent_Identity=26.1437908496732, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1789816, Length=301, Percent_Identity=25.2491694352159, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788577, Length=314, Percent_Identity=27.0700636942675, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786324, Length=299, Percent_Identity=26.4214046822742, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 35471; Mature: 35340

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEVNNPHDRLIRETFQDKKEAATFFKNTLPPEVVELLDLENLELTESSFVSEELKQEQT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
DLLFQIPLKSGNKSNVYLLFEHKSYLENTIYIQLLGYLTEIYRNQQRSGESFSVVIPFVF
CEEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE
YHGEKEWKLGDRFSDQFVLTKQETDVFQDFIPDFKIDLFDLEGIELKKKLESITFQVTLG
EECCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
VVQRIRERDLEFVSHLPGLFSLLLGIEEESKRVAILRKLLLYIYWARDLKPTELKRVLAI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SKLEQYEELTMTTAERLISEGIQQGKIEGKIETARNMLSEDIQLEAVLRITGLSKQDLKD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
HGVI
CCCC
>Mature Secondary Structure 
TEVNNPHDRLIRETFQDKKEAATFFKNTLPPEVVELLDLENLELTESSFVSEELKQEQT
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
DLLFQIPLKSGNKSNVYLLFEHKSYLENTIYIQLLGYLTEIYRNQQRSGESFSVVIPFVF
CEEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE
YHGEKEWKLGDRFSDQFVLTKQETDVFQDFIPDFKIDLFDLEGIELKKKLESITFQVTLG
EECCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
VVQRIRERDLEFVSHLPGLFSLLLGIEEESKRVAILRKLLLYIYWARDLKPTELKRVLAI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SKLEQYEELTMTTAERLISEGIQQGKIEGKIETARNMLSEDIQLEAVLRITGLSKQDLKD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
HGVI
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]