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The map label for this gene is yejA [C]

Identifier: 116328855

GI number: 116328855

Start: 2637024

End: 2638826

Strand: Reverse

Name: yejA [C]

Synonym: LBL_2239

Alternate gene names: 116328855

Gene position: 2638826-2637024 (Counterclockwise)

Preceding gene: 116328856

Following gene: 116328854

Centisome position: 73.01

GC content: 41.43

Gene sequence:

>1803_bases
TTGAAAAGATATTCTATTTTTTGCATGTTTTTTGTGCTCTCTGTTTTCACTTTTCTTGCATGCGGAGATAAAGAAGAATT
CGAAACGTTGGCTGTCGTAGAGACTCTTCCTTGGAACGGAAATCCGAATTCGATTCCTGTCGCTCTTAGAGGGCAGAATC
CGATCGTTTCTCCCCATGCGAAAAAAGGCGGAACGTTTCGAATTTATAGCCACCAATTTCCGAAGTCCTTGAATTACTAT
TTGGACCAATTTTCCACTACGGCTCATATCTTCAGTTTGATGTTCGAGCCTCTTTTGGACTACCATCCGATCACATTGGA
GCCGATTCCTCATCTCGCTTCTTCTTGGAGGGTTTCTCCGGATAAAAAGAAGTTTACGTTTACGATTGACGCAAATGCGG
TTTGGTCCGACGGTAAACCGGTCACTGCAAACGACGTTTTATTCACTTATGAAACTTTGATGAATAAGAATAACAACACG
GCGGTTTTTAGAATTGACCTTTCTCGTTTCGAAAAACCGGTCGTTTTGAGCGAAAGAGAAATCGAATTCACTCAAAAAGA
AATTCACTGGTCGAACTTTAACACAATTGCAAACTCCCTCTATATTCTTCCGGCTCATTATTACAAAGATAGAAATTTTG
ATAAAGAGAATTTCGATTTTCCGGTCGTCTCCGGTCCTTATTCCATGCTCTCGGCAAAAAAAGGCCGTTATATTAAGATG
CGAAGAAGGGGAGATTATTGGATGCGCGCGTATCCTTTTTACAAAGGACTCGATAACTTCGATACGATTCTATTTAAAGT
TTATAACGAAGAGTCCATCGCGTTTCAAGCATTCAAAAAAGGTGATATAGATATTTATCCGACTTATACGGCTTCCTTTT
GGGTCAAGGACGCGATCGGGGAGAAGTTCGACGAGAATTATATTCTTAAACAAAAGATCTACAACTCAAGACCGATCGGG
TTCCAAGGATTGGTTTTTAACATGAGAAGAGAGATTTTCTCGGACGTTAAGGTACGTAAGGCGTTTGCTCATCTCGTGGA
CCGAAAACTACTCATAGAAAAATTGGCTTATAACGAATACGAAGAAACAAACGCATTTTATCAGGATCTTTGGCCTGCAA
ATTCTTTCCCGAATCCTCCGCTCGAATTCGATGTGGCGAAGGCGAGAGAACTTCTTGCAAAGGCGGGTTGGAAAATCAAC
TCGAAGGGGATTTTGGAAAAAGACGGAAAGGAATTTAGGTTCAGCATATTGGAAAGAGATAAGAAGTCCGAAAAGTATCT
AACGCTCATTCAAGAAAGAGCGAAAGAAGTCGGGATCATCATCAATTTGGAATCGACGGATCTTGCGGAGTGGAGTTCTA
GAATGGACAAGTACGACTTCGATATGACCTGGGCCGCTTGGGGCGGGGGAGTATTCAAGGATCCGGAAGCGATGTGGTAT
TCCAAATATGCGGAAGAAAAAGGACAACCTAATCTTTCTGGATTTAAGAATGTAGCGGTGGATAAACTTATCGATCAACA
AAGAACCGAGTTCAACGTAACGAAACGAAATGAGATCTTGAAAAAAATCGATAAGATCTTAACCGCAGAAGTTCCTTATG
TTCTATTATGGAACACGAGCGCGACAAGAGTCATGTATTGGAACCGGTTTAGAGCCCCTAAAAATCCGCTCGGAAAATTC
GGAAGCGAAAGGGAGGCTTCTTCACTTTGGTGGTTTGATGAAGAACAGTCTTCAAAATTAAACGACGCAATCCTAAAAAA
GGAGAAACTTTCTCCGGTTCCGGGTAAGGTATACTTTCAATAG

Upstream 100 bases:

>100_bases
GTGGAACATTTGGATCAACTCAAGGAGATCCTAAGTAATCTCAAACAAATCCCGGACGTATATCAAGCGCATAGAATTAA
AAATTAAACGAGGTGATTTT

Downstream 100 bases:

>100_bases
ATTCAAAATTATGAATAAACGGAATCGATTCGAGGAACTCGGCGGCGTTATACGGGATTTTTTGAGCTCCCCTAAGATTC
CGAACTTTATCGAGTTTTTG

Product: substrate binding protein of an ABC transporter complex

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 600

Protein sequence:

>600_residues
MKRYSIFCMFFVLSVFTFLACGDKEEFETLAVVETLPWNGNPNSIPVALRGQNPIVSPHAKKGGTFRIYSHQFPKSLNYY
LDQFSTTAHIFSLMFEPLLDYHPITLEPIPHLASSWRVSPDKKKFTFTIDANAVWSDGKPVTANDVLFTYETLMNKNNNT
AVFRIDLSRFEKPVVLSEREIEFTQKEIHWSNFNTIANSLYILPAHYYKDRNFDKENFDFPVVSGPYSMLSAKKGRYIKM
RRRGDYWMRAYPFYKGLDNFDTILFKVYNEESIAFQAFKKGDIDIYPTYTASFWVKDAIGEKFDENYILKQKIYNSRPIG
FQGLVFNMRREIFSDVKVRKAFAHLVDRKLLIEKLAYNEYEETNAFYQDLWPANSFPNPPLEFDVAKARELLAKAGWKIN
SKGILEKDGKEFRFSILERDKKSEKYLTLIQERAKEVGIIINLESTDLAEWSSRMDKYDFDMTWAAWGGGVFKDPEAMWY
SKYAEEKGQPNLSGFKNVAVDKLIDQQRTEFNVTKRNEILKKIDKILTAEVPYVLLWNTSATRVMYWNRFRAPKNPLGKF
GSEREASSLWWFDEEQSSKLNDAILKKEKLSPVPGKVYFQ

Sequences:

>Translated_600_residues
MKRYSIFCMFFVLSVFTFLACGDKEEFETLAVVETLPWNGNPNSIPVALRGQNPIVSPHAKKGGTFRIYSHQFPKSLNYY
LDQFSTTAHIFSLMFEPLLDYHPITLEPIPHLASSWRVSPDKKKFTFTIDANAVWSDGKPVTANDVLFTYETLMNKNNNT
AVFRIDLSRFEKPVVLSEREIEFTQKEIHWSNFNTIANSLYILPAHYYKDRNFDKENFDFPVVSGPYSMLSAKKGRYIKM
RRRGDYWMRAYPFYKGLDNFDTILFKVYNEESIAFQAFKKGDIDIYPTYTASFWVKDAIGEKFDENYILKQKIYNSRPIG
FQGLVFNMRREIFSDVKVRKAFAHLVDRKLLIEKLAYNEYEETNAFYQDLWPANSFPNPPLEFDVAKARELLAKAGWKIN
SKGILEKDGKEFRFSILERDKKSEKYLTLIQERAKEVGIIINLESTDLAEWSSRMDKYDFDMTWAAWGGGVFKDPEAMWY
SKYAEEKGQPNLSGFKNVAVDKLIDQQRTEFNVTKRNEILKKIDKILTAEVPYVLLWNTSATRVMYWNRFRAPKNPLGKF
GSEREASSLWWFDEEQSSKLNDAILKKEKLSPVPGKVYFQ
>Mature_600_residues
MKRYSIFCMFFVLSVFTFLACGDKEEFETLAVVETLPWNGNPNSIPVALRGQNPIVSPHAKKGGTFRIYSHQFPKSLNYY
LDQFSTTAHIFSLMFEPLLDYHPITLEPIPHLASSWRVSPDKKKFTFTIDANAVWSDGKPVTANDVLFTYETLMNKNNNT
AVFRIDLSRFEKPVVLSEREIEFTQKEIHWSNFNTIANSLYILPAHYYKDRNFDKENFDFPVVSGPYSMLSAKKGRYIKM
RRRGDYWMRAYPFYKGLDNFDTILFKVYNEESIAFQAFKKGDIDIYPTYTASFWVKDAIGEKFDENYILKQKIYNSRPIG
FQGLVFNMRREIFSDVKVRKAFAHLVDRKLLIEKLAYNEYEETNAFYQDLWPANSFPNPPLEFDVAKARELLAKAGWKIN
SKGILEKDGKEFRFSILERDKKSEKYLTLIQERAKEVGIIINLESTDLAEWSSRMDKYDFDMTWAAWGGGVFKDPEAMWY
SKYAEEKGQPNLSGFKNVAVDKLIDQQRTEFNVTKRNEILKKIDKILTAEVPYVLLWNTSATRVMYWNRFRAPKNPLGKF
GSEREASSLWWFDEEQSSKLNDAILKKEKLSPVPGKVYFQ

Specific function: Unknown

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=575, Percent_Identity=26.0869565217391, Blast_Score=174, Evalue=2e-44,
Organism=Escherichia coli, GI1789887, Length=455, Percent_Identity=24.3956043956044, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI87081878, Length=460, Percent_Identity=23.695652173913, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1787762, Length=439, Percent_Identity=26.4236902050114, Blast_Score=88, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 70163; Mature: 70163

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYSIFCMFFVLSVFTFLACGDKEEFETLAVVETLPWNGNPNSIPVALRGQNPIVSPHA
CCCHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEECCCCCCCCCEEEEEECCCCCCCCCC
KKGGTFRIYSHQFPKSLNYYLDQFSTTAHIFSLMFEPLLDYHPITLEPIPHLASSWRVSP
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCCCC
DKKKFTFTIDANAVWSDGKPVTANDVLFTYETLMNKNNNTAVFRIDLSRFEKPVVLSERE
CCCEEEEEEECCEEECCCCCCCCCCCEEEEHHHHCCCCCEEEEEEEHHHCCCCEEECCCC
IEFTQKEIHWSNFNTIANSLYILPAHYYKDRNFDKENFDFPVVSGPYSMLSAKKGRYIKM
CHHHHHHHCCCCHHHHHCEEEEEEHHHHCCCCCCCCCCCCCEECCCHHHHHCCCCCEEEE
RRRGDYWMRAYPFYKGLDNFDTILFKVYNEESIAFQAFKKGDIDIYPTYTASFWVKDAIG
EECCCCEEEECHHHCCCCCCCEEEEEEECCCCEEEEHHCCCCEEEEECCCHHHHHHHHHC
EKFDENYILKQKIYNSRPIGFQGLVFNMRREIFSDVKVRKAFAHLVDRKLLIEKLAYNEY
CCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EETNAFYQDLWPANSFPNPPLEFDVAKARELLAKAGWKINSKGILEKDGKEFRFSILERD
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHCC
KKSEKYLTLIQERAKEVGIIINLESTDLAEWSSRMDKYDFDMTWAAWGGGVFKDPEAMWY
CCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHH
SKYAEEKGQPNLSGFKNVAVDKLIDQQRTEFNVTKRNEILKKIDKILTAEVPYVLLWNTS
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCC
ATRVMYWNRFRAPKNPLGKFGSEREASSLWWFDEEQSSKLNDAILKKEKLSPVPGKVYFQ
CCEEEEEHHCCCCCCHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEC
>Mature Secondary Structure
MKRYSIFCMFFVLSVFTFLACGDKEEFETLAVVETLPWNGNPNSIPVALRGQNPIVSPHA
CCCHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEECCCCCCCCCEEEEEECCCCCCCCCC
KKGGTFRIYSHQFPKSLNYYLDQFSTTAHIFSLMFEPLLDYHPITLEPIPHLASSWRVSP
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCCCC
DKKKFTFTIDANAVWSDGKPVTANDVLFTYETLMNKNNNTAVFRIDLSRFEKPVVLSERE
CCCEEEEEEECCEEECCCCCCCCCCCEEEEHHHHCCCCCEEEEEEEHHHCCCCEEECCCC
IEFTQKEIHWSNFNTIANSLYILPAHYYKDRNFDKENFDFPVVSGPYSMLSAKKGRYIKM
CHHHHHHHCCCCHHHHHCEEEEEEHHHHCCCCCCCCCCCCCEECCCHHHHHCCCCCEEEE
RRRGDYWMRAYPFYKGLDNFDTILFKVYNEESIAFQAFKKGDIDIYPTYTASFWVKDAIG
EECCCCEEEECHHHCCCCCCCEEEEEEECCCCEEEEHHCCCCEEEEECCCHHHHHHHHHC
EKFDENYILKQKIYNSRPIGFQGLVFNMRREIFSDVKVRKAFAHLVDRKLLIEKLAYNEY
CCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EETNAFYQDLWPANSFPNPPLEFDVAKARELLAKAGWKINSKGILEKDGKEFRFSILERD
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHCC
KKSEKYLTLIQERAKEVGIIINLESTDLAEWSSRMDKYDFDMTWAAWGGGVFKDPEAMWY
CCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHH
SKYAEEKGQPNLSGFKNVAVDKLIDQQRTEFNVTKRNEILKKIDKILTAEVPYVLLWNTS
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCC
ATRVMYWNRFRAPKNPLGKFGSEREASSLWWFDEEQSSKLNDAILKKEKLSPVPGKVYFQ
CCEEEEEHHCCCCCCHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA