| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
Click here to switch to the map view.
The map label for this gene is 116328854
Identifier: 116328854
GI number: 116328854
Start: 2635946
End: 2637013
Strand: Reverse
Name: 116328854
Synonym: LBL_2238
Alternate gene names: NA
Gene position: 2637013-2635946 (Counterclockwise)
Preceding gene: 116328855
Following gene: 116328853
Centisome position: 72.96
GC content: 41.57
Gene sequence:
>1068_bases ATGAATAAACGGAATCGATTCGAGGAACTCGGCGGCGTTATACGGGATTTTTTGAGCTCCCCTAAGATTCCGAACTTTAT CGAGTTTTTGGAAAAAGGACTCGATAAGGAGCTTTTTTACGATCCAGAAAAAACGAAACCGGAAATTCCGATCGAAGATC TGCCGGTCGATTATCGTCTTCGCGAATCGGGATTTGCAAGAAAAACGTATGAGAGACTTTTTCCCGTTTCTCATCTATTT CGCATAACGCACAGATATGAGCGGGAATATTTGGACAACTTCATGCCTCTGTCCACAGGGAAATATATAGGAAGGGGTTC CTACAAATTCGTATATGCACTTCCTTGGAATCAGGTCGTAAAGGTGGGAAAATCCAAACTACCATCGGATCCGATTTTCG GTTCCTTATACAAACACGTTCAAAAAAATTTGGATCGTTATCTCAAATCGGAAGAGATCCAACTGATGGAATTTTTGGAA TCCAAAGCTTGGGCAAGGTCGTCGAAGGAAAATATACGATTTAAATTCGCTCGTCTTGGTTTGGAAAGACTTCACTATTG GAAATTGAAGTCTTTGATACCGGATCTTGTGTTACCCACGCGTTATTTTATGGGACTGCGCGCTAGAACGACTCCGTTCG GAGTTCCGATTTTTACTTTGACTCCTTGCGACAATCAGAATCTTCTTCCTGGAAAACATCTCAAAGAATTCATACGACTG AACGAAAAAATTCGTCAGAACCCGCTGCAGGATGCGTTCTTTCCGAAGTGGAAGTTGAACTTCGATACGCATAAGTTCGG AGTCGTAAGTCGGTCCAGATTGAAAAAGATCGCTTTGGATTTTCATCGTGTGATAGAAGTGACCAAACATTTGGCTGAAG AGGAGAAACTGATCTTTGATATACATTCCGAAAATATCATCATAACGTTTCCCGATTTTTCCTTGAAGATATTCGATTAT CACGTTTTTGACGAACACCTCTACGAACCAAGTAAAGAGAATCCTTCTCCCGAAATTGATCATATCAATACGATCCGCGA ATTCGTACGGTCTTTCGAGCTTGGCTGA
Upstream 100 bases:
>100_bases TTTGATGAAGAACAGTCTTCAAAATTAAACGACGCAATCCTAAAAAAGGAGAAACTTTCTCCGGTTCCGGGTAAGGTATA CTTTCAATAGATTCAAAATT
Downstream 100 bases:
>100_bases AGGCGAATCCCGGTTCAGAAAACTGTGGATTTCTAGATTGGAGGGGAGGTTTCCCCCTCGCTTCAGACGCGTCGCGTCTT TCGCTACCCCCTCTCCGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MNKRNRFEELGGVIRDFLSSPKIPNFIEFLEKGLDKELFYDPEKTKPEIPIEDLPVDYRLRESGFARKTYERLFPVSHLF RITHRYEREYLDNFMPLSTGKYIGRGSYKFVYALPWNQVVKVGKSKLPSDPIFGSLYKHVQKNLDRYLKSEEIQLMEFLE SKAWARSSKENIRFKFARLGLERLHYWKLKSLIPDLVLPTRYFMGLRARTTPFGVPIFTLTPCDNQNLLPGKHLKEFIRL NEKIRQNPLQDAFFPKWKLNFDTHKFGVVSRSRLKKIALDFHRVIEVTKHLAEEEKLIFDIHSENIIITFPDFSLKIFDY HVFDEHLYEPSKENPSPEIDHINTIREFVRSFELG
Sequences:
>Translated_355_residues MNKRNRFEELGGVIRDFLSSPKIPNFIEFLEKGLDKELFYDPEKTKPEIPIEDLPVDYRLRESGFARKTYERLFPVSHLF RITHRYEREYLDNFMPLSTGKYIGRGSYKFVYALPWNQVVKVGKSKLPSDPIFGSLYKHVQKNLDRYLKSEEIQLMEFLE SKAWARSSKENIRFKFARLGLERLHYWKLKSLIPDLVLPTRYFMGLRARTTPFGVPIFTLTPCDNQNLLPGKHLKEFIRL NEKIRQNPLQDAFFPKWKLNFDTHKFGVVSRSRLKKIALDFHRVIEVTKHLAEEEKLIFDIHSENIIITFPDFSLKIFDY HVFDEHLYEPSKENPSPEIDHINTIREFVRSFELG >Mature_355_residues MNKRNRFEELGGVIRDFLSSPKIPNFIEFLEKGLDKELFYDPEKTKPEIPIEDLPVDYRLRESGFARKTYERLFPVSHLF RITHRYEREYLDNFMPLSTGKYIGRGSYKFVYALPWNQVVKVGKSKLPSDPIFGSLYKHVQKNLDRYLKSEEIQLMEFLE SKAWARSSKENIRFKFARLGLERLHYWKLKSLIPDLVLPTRYFMGLRARTTPFGVPIFTLTPCDNQNLLPGKHLKEFIRL NEKIRQNPLQDAFFPKWKLNFDTHKFGVVSRSRLKKIALDFHRVIEVTKHLAEEEKLIFDIHSENIIITFPDFSLKIFDY HVFDEHLYEPSKENPSPEIDHINTIREFVRSFELG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42267; Mature: 42267
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKRNRFEELGGVIRDFLSSPKIPNFIEFLEKGLDKELFYDPEKTKPEIPIEDLPVDYRL CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEEE RESGFARKTYERLFPVSHLFRITHRYEREYLDNFMPLSTGKYIGRGSYKFVYALPWNQVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEEECCHHHHH KVGKSKLPSDPIFGSLYKHVQKNLDRYLKSEEIQLMEFLESKAWARSSKENIRFKFARLG HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LERLHYWKLKSLIPDLVLPTRYFMGLRARTTPFGVPIFTLTPCDNQNLLPGKHLKEFIRL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHH NEKIRQNPLQDAFFPKWKLNFDTHKFGVVSRSRLKKIALDFHRVIEVTKHLAEEEKLIFD HHHHHHCCCHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE IHSENIIITFPDFSLKIFDYHVFDEHLYEPSKENPSPEIDHINTIREFVRSFELG EECCCEEEECCCCEEEEEEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKRNRFEELGGVIRDFLSSPKIPNFIEFLEKGLDKELFYDPEKTKPEIPIEDLPVDYRL CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEEE RESGFARKTYERLFPVSHLFRITHRYEREYLDNFMPLSTGKYIGRGSYKFVYALPWNQVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEEECCHHHHH KVGKSKLPSDPIFGSLYKHVQKNLDRYLKSEEIQLMEFLESKAWARSSKENIRFKFARLG HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LERLHYWKLKSLIPDLVLPTRYFMGLRARTTPFGVPIFTLTPCDNQNLLPGKHLKEFIRL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHH NEKIRQNPLQDAFFPKWKLNFDTHKFGVVSRSRLKKIALDFHRVIEVTKHLAEEEKLIFD HHHHHHCCCHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE IHSENIIITFPDFSLKIFDYHVFDEHLYEPSKENPSPEIDHINTIREFVRSFELG EECCCEEEECCCCEEEEEEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA