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The map label for this gene is rfaQ [H]

Identifier: 116328647

GI number: 116328647

Start: 2351399

End: 2352430

Strand: Reverse

Name: rfaQ [H]

Synonym: LBL_2013

Alternate gene names: 116328647

Gene position: 2352430-2351399 (Counterclockwise)

Preceding gene: 116328648

Following gene: 116328646

Centisome position: 65.08

GC content: 41.57

Gene sequence:

>1032_bases
GTGACTGAAAAAATACTACTGGTTCAGACCGCATTTTTAGGAGATCTGATCTTAACGACTCCCTTCTTTCGGGAAGTCAA
AAGAAAATATCGGAATTCGCACCTTACGGTCGTAGTCAACAAAGGTACAGAAAGTGTGCTGGAGGCCAACCCTTATATAA
ACAGACTGATTCCTTTGGATAAGAAGGAATTTAAAAGATCTTTGTGGAAATTTTTTTGCTTTTTGTGGAGCCTCCGAAAA
GAACGTTATACTCTTTGTATCCTTCCCCATTTTTCCTTTCGTTCCACTTTGATCGGGTTTGCTAGTAGGGCCAAGGTGAG
AATCGGTTACGAATCCGCCGGTTTTTCTTTTTTACTCACTAAAAAAGTTCCGAGATCTATTCGAGGAATGCACGAGGTGG
AAAAACTTTTTTCTTTGTTATACGATAGAGAGGAATATACTAAAATACAAAAACGTCCTGAACTTTTTTGGTACGAAGAA
TCCGTTTTTCGAGTTCGAGTTTTGATGAGGGAGAATGGACTTGAACCCGGCAACTACGTTTTACTCGCGCCGAGTTCGGT
TTGGGAAACGAAACGGATGCCCGCTTCTAAGTTTAGGGTTTTAGGAGAACGTCTTGCAAAAGAATCCGGAAAAAAAGTGG
TTCTTATTGGTTCCAAAGCGGATATCGAGCTTTGTGAAGAAGTAGGCGCTGGTTACGGAATTAATTTTGCGGGAAAAACC
GATTTACCCGAACTTTCGTTTTTGGTTTCCAAAGCCGCTTTGGTGATCAGTAACGATTCTTCTCCAATTCATTTCGCTTC
TGCGTTTAATATTCCCACGTTAGCTGTTTTTGGTGCAACTATTCCCGATTTCGGTTATACTCCTCTTGCCGATTCTTTCT
TTATTTCCGAGATCCAGGGGCTTTATTGTCGTCCTTGCGGGATTCACGGCGGAAAGGTTTGTCCGGAAGGACATTTTCGT
TGTATGAAGGAGCAGAATGTGGACAAAATGTTTGAAGCGGCGATCCAATTGGAAAGAGGAAATGTAAAATGA

Upstream 100 bases:

>100_bases
AAGAGGAACGTTTTCAAAACGGTTTGGCTCTTTCGATCGGCGGTTTGGGGATAAACAATTTTGCGACGATTCTCTCCAAA
GTTTAGAACGGAATTTAACA

Downstream 100 bases:

>100_bases
CCCATGCCCTTTATAGAGAAAGAATCGCTGAAGTTCAGAAAAAGCTCAAAGACGGAGAGGTTTTGATCGTTTTTGCGGCT
TCTCATTTAATCCGAAATCG

Product: ADP-heptosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MTEKILLVQTAFLGDLILTTPFFREVKRKYRNSHLTVVVNKGTESVLEANPYINRLIPLDKKEFKRSLWKFFCFLWSLRK
ERYTLCILPHFSFRSTLIGFASRAKVRIGYESAGFSFLLTKKVPRSIRGMHEVEKLFSLLYDREEYTKIQKRPELFWYEE
SVFRVRVLMRENGLEPGNYVLLAPSSVWETKRMPASKFRVLGERLAKESGKKVVLIGSKADIELCEEVGAGYGINFAGKT
DLPELSFLVSKAALVISNDSSPIHFASAFNIPTLAVFGATIPDFGYTPLADSFFISEIQGLYCRPCGIHGGKVCPEGHFR
CMKEQNVDKMFEAAIQLERGNVK

Sequences:

>Translated_343_residues
MTEKILLVQTAFLGDLILTTPFFREVKRKYRNSHLTVVVNKGTESVLEANPYINRLIPLDKKEFKRSLWKFFCFLWSLRK
ERYTLCILPHFSFRSTLIGFASRAKVRIGYESAGFSFLLTKKVPRSIRGMHEVEKLFSLLYDREEYTKIQKRPELFWYEE
SVFRVRVLMRENGLEPGNYVLLAPSSVWETKRMPASKFRVLGERLAKESGKKVVLIGSKADIELCEEVGAGYGINFAGKT
DLPELSFLVSKAALVISNDSSPIHFASAFNIPTLAVFGATIPDFGYTPLADSFFISEIQGLYCRPCGIHGGKVCPEGHFR
CMKEQNVDKMFEAAIQLERGNVK
>Mature_342_residues
TEKILLVQTAFLGDLILTTPFFREVKRKYRNSHLTVVVNKGTESVLEANPYINRLIPLDKKEFKRSLWKFFCFLWSLRKE
RYTLCILPHFSFRSTLIGFASRAKVRIGYESAGFSFLLTKKVPRSIRGMHEVEKLFSLLYDREEYTKIQKRPELFWYEES
VFRVRVLMRENGLEPGNYVLLAPSSVWETKRMPASKFRVLGERLAKESGKKVVLIGSKADIELCEEVGAGYGINFAGKTD
LPELSFLVSKAALVISNDSSPIHFASAFNIPTLAVFGATIPDFGYTPLADSFFISEIQGLYCRPCGIHGGKVCPEGHFRC
MKEQNVDKMFEAAIQLERGNVK

Specific function: Catalyzes heptose transfer to the lipopolysaccharide core. It transfers a heptose, called heptose(III), to the heptose(II) of the inner core [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790050, Length=301, Percent_Identity=25.2491694352159, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1790062, Length=284, Percent_Identity=27.4647887323944, Blast_Score=82, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011916 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.4.1.-

Molecular weight: Translated: 39127; Mature: 38996

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKILLVQTAFLGDLILTTPFFREVKRKYRNSHLTVVVNKGTESVLEANPYINRLIPLD
CCCEEEEEEHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCHHHHCCCCC
KKEFKRSLWKFFCFLWSLRKERYTLCILPHFSFRSTLIGFASRAKVRIGYESAGFSFLLT
HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCEEEEEECCCCCEEEEE
KKVPRSIRGMHEVEKLFSLLYDREEYTKIQKRPELFWYEESVFRVRVLMRENGLEPGNYV
HHCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCEE
LLAPSSVWETKRMPASKFRVLGERLAKESGKKVVLIGSKADIELCEEVGAGYGINFAGKT
EECCCHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCC
DLPELSFLVSKAALVISNDSSPIHFASAFNIPTLAVFGATIPDFGYTPLADSFFISEIQG
CCCHHHHHHHHEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCC
LYCRPCGIHGGKVCPEGHFRCMKEQNVDKMFEAAIQLERGNVK
CEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TEKILLVQTAFLGDLILTTPFFREVKRKYRNSHLTVVVNKGTESVLEANPYINRLIPLD
CCEEEEEEHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCHHHHCCCCC
KKEFKRSLWKFFCFLWSLRKERYTLCILPHFSFRSTLIGFASRAKVRIGYESAGFSFLLT
HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCEEEEEECCCCCEEEEE
KKVPRSIRGMHEVEKLFSLLYDREEYTKIQKRPELFWYEESVFRVRVLMRENGLEPGNYV
HHCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCEE
LLAPSSVWETKRMPASKFRVLGERLAKESGKKVVLIGSKADIELCEEVGAGYGINFAGKT
EECCCHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCC
DLPELSFLVSKAALVISNDSSPIHFASAFNIPTLAVFGATIPDFGYTPLADSFFISEIQG
CCCHHHHHHHHEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCC
LYCRPCGIHGGKVCPEGHFRCMKEQNVDKMFEAAIQLERGNVK
CEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA