Click here to switch to the map view.

The map label for this gene is pppA [C]

Identifier: 116328641

GI number: 116328641

Start: 2338969

End: 2339817

Strand: Direct

Name: pppA [C]

Synonym: LBL_2004

Alternate gene names: 116328641

Gene position: 2338969-2339817 (Clockwise)

Preceding gene: 116328640

Following gene: 116328645

Centisome position: 64.71

GC content: 39.81

Gene sequence:

>849_bases
TTGCCGAACTTGCCTGATTCTCCGAGTTTTTGGCTGTTCTTAAGTTTCGGAAGTTTCGGCGCCGCTTCCTTAGGAAGTTT
TTACGTCACCCTAAGTTTTCGAATTTTAGAATATTACTACGGTAAAAACAGAAAATCGTTTTCGTTTTTCGAAAAATGGA
AACGGATTTTCATCCTTCCAAGTTCCTGCGATCACTGCAAAGCGGAGGTTCGTTATCCGAAATTGTTGCCTATTTTCGGT
TTTTTTATCTCAAAAGGCAAATGTCAATTTTGCAACGGTAGAATTCGTCCTCTTTTTCCTTTGATAGAATTCTCCTTTGT
ATGCGTTTTTATTTTTTGTTTTTCCTTAACCAAAAATCCCGCGTTCAGTCTCGTATTTCTTTTCCTCTGCGGCCATCTTT
TAATCTCCTGTCTTACGGACGCATTTCACTTCTCCTTGGATTACGAAAATCTTCCTTGGATTCTATTTTTCGGAATCACA
TCCGTTTTTTTGTTCAACGGAAAATTGCCGGGTTTAAACGAACTTTACGTTTTGGGCGGTTTTTTTCTCGTGTTTTTGAT
CCTGTTTTTTTTATTTCCGGGTGGAATCGGGTTCGGAGACGTTCTGTTCGCTCCTGTTTACGCATTGATCGCAGGCCACC
CTTGGTGGATGTTCTTTTTAAACGCTTCCTACATTCCGGCCGTTTTATTGACGATTATTCTTCGGGAAAGAGGAAAAAGT
TTGCGCAAGGCTCCGATTCCTATGGGTTTGTATTTCGGAATCGGCCTAATGCTCACTTTTTTGAGTAGAGTTTTTTTTGA
ATCTGATCTGGCTCCGTTTACCTTATTTTCAGAATATTCAGAAGAATGA

Upstream 100 bases:

>100_bases
TTGATTCTGGTTCCGGGCTACATCTTTACCGAGTCCAAAAATTACATCCGTATCAGTTTCGCCTCCGAATGGGAAAATCT
CAAGCGAGGAATCTCCGCCC

Downstream 100 bases:

>100_bases
ATGCGAAAAGAAATCGTATCCAAGTTTTTCAGCCGAAAGCCGTATTTAGCTCGACATTGCGTTCGAATATTTTTTTATCG
AAGAACAAAATGGATTTGCA

Product: prepilin leader peptidase

Products: NA

Alternate protein names: Type 4 Prepilin-Like Proteins Leader Peptide Processing

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MPNLPDSPSFWLFLSFGSFGAASLGSFYVTLSFRILEYYYGKNRKSFSFFEKWKRIFILPSSCDHCKAEVRYPKLLPIFG
FFISKGKCQFCNGRIRPLFPLIEFSFVCVFIFCFSLTKNPAFSLVFLFLCGHLLISCLTDAFHFSLDYENLPWILFFGIT
SVFLFNGKLPGLNELYVLGGFFLVFLILFFLFPGGIGFGDVLFAPVYALIAGHPWWMFFLNASYIPAVLLTIILRERGKS
LRKAPIPMGLYFGIGLMLTFLSRVFFESDLAPFTLFSEYSEE

Sequences:

>Translated_282_residues
MPNLPDSPSFWLFLSFGSFGAASLGSFYVTLSFRILEYYYGKNRKSFSFFEKWKRIFILPSSCDHCKAEVRYPKLLPIFG
FFISKGKCQFCNGRIRPLFPLIEFSFVCVFIFCFSLTKNPAFSLVFLFLCGHLLISCLTDAFHFSLDYENLPWILFFGIT
SVFLFNGKLPGLNELYVLGGFFLVFLILFFLFPGGIGFGDVLFAPVYALIAGHPWWMFFLNASYIPAVLLTIILRERGKS
LRKAPIPMGLYFGIGLMLTFLSRVFFESDLAPFTLFSEYSEE
>Mature_281_residues
PNLPDSPSFWLFLSFGSFGAASLGSFYVTLSFRILEYYYGKNRKSFSFFEKWKRIFILPSSCDHCKAEVRYPKLLPIFGF
FISKGKCQFCNGRIRPLFPLIEFSFVCVFIFCFSLTKNPAFSLVFLFLCGHLLISCLTDAFHFSLDYENLPWILFFGITS
VFLFNGKLPGLNELYVLGGFFLVFLILFFLFPGGIGFGDVLFAPVYALIAGHPWWMFFLNASYIPAVLLTIILRERGKSL
RKAPIPMGLYFGIGLMLTFLSRVFFESDLAPFTLFSEYSEE

Specific function: Unknown

COG id: COG1989

COG function: function code NOU; Type II secretory pathway, prepilin signal peptidase PulO and related peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32377; Mature: 32245

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNLPDSPSFWLFLSFGSFGAASLGSFYVTLSFRILEYYYGKNRKSFSFFEKWKRIFILP
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEECC
SSCDHCKAEVRYPKLLPIFGFFISKGKCQFCNGRIRPLFPLIEFSFVCVFIFCFSLTKNP
CCCCHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
AFSLVFLFLCGHLLISCLTDAFHFSLDYENLPWILFFGITSVFLFNGKLPGLNELYVLGG
HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH
FFLVFLILFFLFPGGIGFGDVLFAPVYALIAGHPWWMFFLNASYIPAVLLTIILRERGKS
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHEEEECCHHHHHHHHHHHHHHHCHH
LRKAPIPMGLYFGIGLMLTFLSRVFFESDLAPFTLFSEYSEE
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
>Mature Secondary Structure 
PNLPDSPSFWLFLSFGSFGAASLGSFYVTLSFRILEYYYGKNRKSFSFFEKWKRIFILP
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEECC
SSCDHCKAEVRYPKLLPIFGFFISKGKCQFCNGRIRPLFPLIEFSFVCVFIFCFSLTKNP
CCCCHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
AFSLVFLFLCGHLLISCLTDAFHFSLDYENLPWILFFGITSVFLFNGKLPGLNELYVLGG
HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH
FFLVFLILFFLFPGGIGFGDVLFAPVYALIAGHPWWMFFLNASYIPAVLLTIILRERGKS
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHEEEECCHHHHHHHHHHHHHHHCHH
LRKAPIPMGLYFGIGLMLTFLSRVFFESDLAPFTLFSEYSEE
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA