Definition Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence.
Accession NC_008508
Length 3,614,446

Click here to switch to the map view.

The map label for this gene is 116328633

Identifier: 116328633

GI number: 116328633

Start: 2328200

End: 2330032

Strand: Direct

Name: 116328633

Synonym: LBL_1996

Alternate gene names: NA

Gene position: 2328200-2330032 (Clockwise)

Preceding gene: 116328631

Following gene: 116328640

Centisome position: 64.41

GC content: 43.1

Gene sequence:

>1833_bases
ATGTCTCACAATCTCTCTGAAAAAACAAGAGAAATATTCGGGAAAAAGCCGTATTTATCCCTCTACTTTCAAAGGTCCGG
AAATTCGAACCTGAGCTTCACTCTCAAACCGGCAAAAAATCCGGAAGAATGGTTTTTAGAACTCAACGGTCGTGCTCTCT
CAAGCACTGTAGCGCCTCTCACACAAGCACAAAGAATTCTTCGGGCTCAAAAAATTTCTCAAACGGACTTGGTAGCGGTG
ATTGGTCTCGGAAATCCGCATCTCATCTTTGAAGTCCATAAAAATTTAGAACCCGGCCAGGTTCTTCTTCTCGTAGATGA
AAATCCCGAATTGATCTTTCCTCTCTGGAACGGAATTTTAGAACCTGTGATGGATGTTCCGGGTAGACATTTGTTTCTGG
GACATTCCACCCTGGGTCTCCTTTGGAACTATTTAGAATCCCTTCCCATGGAACGAGTTTCGGGAATTCGTATTTTCAGG
AACACGGCAAGTACGTCTCTGAACGAAGTGTACTACCAAGAATTGGAAATTAAGATCCGTAAAATTCTCTCTTCTAAGAT
GAGCGACCTTTTGACCAAATTCGAGTTTGAAAGAATCTGGGTTCGCAACACTTTCGTCAATACCGCTAACTTTCCGGACT
CCAAAAACCCGAGAACGAGAATCGAATTCCTAAAAGAAAAATTTTTGAATACTCCCGCGATGCTCGTATCCGCAGGCCCA
TCCCTCAGAAGTCAATGCAAATGGATCTCTAAAATCAGAGACAAAGTGTTTTTATTTTCCTGCGATACTTCTTTGAAAGT
CCTTTTAAAATTCGGAATCGTTCCCGACGGAGTCATCACGCTCGACGCGCAGACTCATTCTTTCTTTCATTTTATGGGAG
CAAAATCGTCTAATGTTCCCCTGTTTGCGGACCTGGTAAGTTCGCCTTCGATCTTAAGATCTCAAAAGTTCACAAAAATA
GTTCATTCTCTAACCGCAAAGTACGTTGTGGACGCAAGCGGAGAATTAAAACGGGAAGTGACCGCAGGTTCCAAAACCGC
TGAAAAACTTTTAGGCCCGATCGGAGACGTCCAATCAGGGGGAAGCGTCGCGACAACCGCTTTTGATCTTCTTCGCAACT
TAGGTTGTAAGCCGATTTTTTTAGTCGGTCAAGATCTTGCTTATTCGGGCAGGGAAATTCATTCTACGGGAACTCACCAT
AACGAAAAATGGCTCACTCTCGTCCGCAGAACACAAAGTCTTGAAAAAATCAACGAGATGATCATCCGTAAAAGAGATAC
TCGCCTGGTTCCGTCGGCGGATGGAGGAGAAGTTCTGAGCGATTACGTTCTGGATCTTTACAGACATTGGTTCGAAGAGT
CGTTTCAAACCTTGGACTTTCCTGTCTACAACGTTAACAGCCGAGGCGCAAAGATCAAAAACTGCGAGAACATTTCCTTA
GAGCAAGCGGATCTGATTCTTTCTTCCTTCCCTTTTCACGGTTTTTTCTGGAAAAAGTTTCCACCCTGGAACACCGAAAA
ATTTCCTGAAATTTCCGAGAAAGCGACCGAGGAATTCCGATCGAACCTTTTGAAAAAAATCCAAAACATCTTGGAAAAGT
TTTCCACTCCTTCGATCCGAGACGAATCCTACGAATCAATTCTTTCCGATTTTCAAAAAGGAATCGTAGAATGGGAAGAC
TTGGGCTACTTAGTTCGCAAAACCGAAATTTATATCTTACGCCACAGAAACACGTTAGACGAAACTAGAAAAAAAAATTT
GTTTTTAGGCGCTGTTCTCAAAGAATTTACGGGACTCAAACGTAAACTTTTGGCCGGTGGCTCCGTTTCGTAG

Upstream 100 bases:

>100_bases
TTAAATACATAGTTTTTGTGTTTTTCATTTCCGGATGTTCCGGAAAGATGATTCCAATTGACCAGATTTGGGCAGGGAAC
AGAATGCACCCTGGGTTATT

Downstream 100 bases:

>100_bases
TAACTTTTCACGCTTTTTCAGAATCGTCTTTAAGTACTCAAATCAAAGCAAGAGTTCCCGCAGATTCCGCTTTTGCAGGA
GAAGTTCAACTTATCAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 610; Mature: 609

Protein sequence:

>610_residues
MSHNLSEKTREIFGKKPYLSLYFQRSGNSNLSFTLKPAKNPEEWFLELNGRALSSTVAPLTQAQRILRAQKISQTDLVAV
IGLGNPHLIFEVHKNLEPGQVLLLVDENPELIFPLWNGILEPVMDVPGRHLFLGHSTLGLLWNYLESLPMERVSGIRIFR
NTASTSLNEVYYQELEIKIRKILSSKMSDLLTKFEFERIWVRNTFVNTANFPDSKNPRTRIEFLKEKFLNTPAMLVSAGP
SLRSQCKWISKIRDKVFLFSCDTSLKVLLKFGIVPDGVITLDAQTHSFFHFMGAKSSNVPLFADLVSSPSILRSQKFTKI
VHSLTAKYVVDASGELKREVTAGSKTAEKLLGPIGDVQSGGSVATTAFDLLRNLGCKPIFLVGQDLAYSGREIHSTGTHH
NEKWLTLVRRTQSLEKINEMIIRKRDTRLVPSADGGEVLSDYVLDLYRHWFEESFQTLDFPVYNVNSRGAKIKNCENISL
EQADLILSSFPFHGFFWKKFPPWNTEKFPEISEKATEEFRSNLLKKIQNILEKFSTPSIRDESYESILSDFQKGIVEWED
LGYLVRKTEIYILRHRNTLDETRKKNLFLGAVLKEFTGLKRKLLAGGSVS

Sequences:

>Translated_610_residues
MSHNLSEKTREIFGKKPYLSLYFQRSGNSNLSFTLKPAKNPEEWFLELNGRALSSTVAPLTQAQRILRAQKISQTDLVAV
IGLGNPHLIFEVHKNLEPGQVLLLVDENPELIFPLWNGILEPVMDVPGRHLFLGHSTLGLLWNYLESLPMERVSGIRIFR
NTASTSLNEVYYQELEIKIRKILSSKMSDLLTKFEFERIWVRNTFVNTANFPDSKNPRTRIEFLKEKFLNTPAMLVSAGP
SLRSQCKWISKIRDKVFLFSCDTSLKVLLKFGIVPDGVITLDAQTHSFFHFMGAKSSNVPLFADLVSSPSILRSQKFTKI
VHSLTAKYVVDASGELKREVTAGSKTAEKLLGPIGDVQSGGSVATTAFDLLRNLGCKPIFLVGQDLAYSGREIHSTGTHH
NEKWLTLVRRTQSLEKINEMIIRKRDTRLVPSADGGEVLSDYVLDLYRHWFEESFQTLDFPVYNVNSRGAKIKNCENISL
EQADLILSSFPFHGFFWKKFPPWNTEKFPEISEKATEEFRSNLLKKIQNILEKFSTPSIRDESYESILSDFQKGIVEWED
LGYLVRKTEIYILRHRNTLDETRKKNLFLGAVLKEFTGLKRKLLAGGSVS
>Mature_609_residues
SHNLSEKTREIFGKKPYLSLYFQRSGNSNLSFTLKPAKNPEEWFLELNGRALSSTVAPLTQAQRILRAQKISQTDLVAVI
GLGNPHLIFEVHKNLEPGQVLLLVDENPELIFPLWNGILEPVMDVPGRHLFLGHSTLGLLWNYLESLPMERVSGIRIFRN
TASTSLNEVYYQELEIKIRKILSSKMSDLLTKFEFERIWVRNTFVNTANFPDSKNPRTRIEFLKEKFLNTPAMLVSAGPS
LRSQCKWISKIRDKVFLFSCDTSLKVLLKFGIVPDGVITLDAQTHSFFHFMGAKSSNVPLFADLVSSPSILRSQKFTKIV
HSLTAKYVVDASGELKREVTAGSKTAEKLLGPIGDVQSGGSVATTAFDLLRNLGCKPIFLVGQDLAYSGREIHSTGTHHN
EKWLTLVRRTQSLEKINEMIIRKRDTRLVPSADGGEVLSDYVLDLYRHWFEESFQTLDFPVYNVNSRGAKIKNCENISLE
QADLILSSFPFHGFFWKKFPPWNTEKFPEISEKATEEFRSNLLKKIQNILEKFSTPSIRDESYESILSDFQKGIVEWEDL
GYLVRKTEIYILRHRNTLDETRKKNLFLGAVLKEFTGLKRKLLAGGSVS

Specific function: Unknown

COG id: COG2604

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002826 [H]

Pfam domain/function: PF01973 DUF115 [H]

EC number: NA

Molecular weight: Translated: 69474; Mature: 69343

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHNLSEKTREIFGKKPYLSLYFQRSGNSNLSFTLKPAKNPEEWFLELNGRALSSTVAPL
CCCCHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCHHHEEEEECCCCHHHHHHHH
TQAQRILRAQKISQTDLVAVIGLGNPHLIFEVHKNLEPGQVLLLVDENPELIFPLWNGIL
HHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEECCCCEEHHHHHHHH
EPVMDVPGRHLFLGHSTLGLLWNYLESLPMERVSGIRIFRNTASTSLNEVYYQELEIKIR
HHHHCCCCCEEEECCHHHHHHHHHHHHCCHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHH
KILSSKMSDLLTKFEFERIWVRNTFVNTANFPDSKNPRTRIEFLKEKFLNTPAMLVSAGP
HHHHHHHHHHHHHHHHHHEEEEHEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCC
SLRSQCKWISKIRDKVFLFSCDTSLKVLLKFGIVPDGVITLDAQTHSFFHFMGAKSSNVP
CHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCC
LFADLVSSPSILRSQKFTKIVHSLTAKYVVDASGELKREVTAGSKTAEKLLGPIGDVQSG
CHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHCCCHHHHHHHCCCCCCCCC
GSVATTAFDLLRNLGCKPIFLVGQDLAYSGREIHSTGTHHNEKWLTLVRRTQSLEKINEM
CCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHH
IIRKRDTRLVPSADGGEVLSDYVLDLYRHWFEESFQTLDFPVYNVNSRGAKIKNCENISL
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCH
EQADLILSSFPFHGFFWKKFPPWNTEKFPEISEKATEEFRSNLLKKIQNILEKFSTPSIR
HHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DESYESILSDFQKGIVEWEDLGYLVRKTEIYILRHRNTLDETRKKNLFLGAVLKEFTGLK
CHHHHHHHHHHHHHCCCHHHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
RKLLAGGSVS
HHHHCCCCCC
>Mature Secondary Structure 
SHNLSEKTREIFGKKPYLSLYFQRSGNSNLSFTLKPAKNPEEWFLELNGRALSSTVAPL
CCCHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCHHHEEEEECCCCHHHHHHHH
TQAQRILRAQKISQTDLVAVIGLGNPHLIFEVHKNLEPGQVLLLVDENPELIFPLWNGIL
HHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEECCCCEEHHHHHHHH
EPVMDVPGRHLFLGHSTLGLLWNYLESLPMERVSGIRIFRNTASTSLNEVYYQELEIKIR
HHHHCCCCCEEEECCHHHHHHHHHHHHCCHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHH
KILSSKMSDLLTKFEFERIWVRNTFVNTANFPDSKNPRTRIEFLKEKFLNTPAMLVSAGP
HHHHHHHHHHHHHHHHHHEEEEHEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCC
SLRSQCKWISKIRDKVFLFSCDTSLKVLLKFGIVPDGVITLDAQTHSFFHFMGAKSSNVP
CHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCC
LFADLVSSPSILRSQKFTKIVHSLTAKYVVDASGELKREVTAGSKTAEKLLGPIGDVQSG
CHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHCCCHHHHHHHCCCCCCCCC
GSVATTAFDLLRNLGCKPIFLVGQDLAYSGREIHSTGTHHNEKWLTLVRRTQSLEKINEM
CCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHH
IIRKRDTRLVPSADGGEVLSDYVLDLYRHWFEESFQTLDFPVYNVNSRGAKIKNCENISL
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCH
EQADLILSSFPFHGFFWKKFPPWNTEKFPEISEKATEEFRSNLLKKIQNILEKFSTPSIR
HHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DESYESILSDFQKGIVEWEDLGYLVRKTEIYILRHRNTLDETRKKNLFLGAVLKEFTGLK
CHHHHHHHHHHHHHCCCHHHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
RKLLAGGSVS
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]