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The map label for this gene is atpC

Identifier: 116328612

GI number: 116328612

Start: 2303730

End: 2304113

Strand: Reverse

Name: atpC

Synonym: LBL_1970

Alternate gene names: 116328612

Gene position: 2304113-2303730 (Counterclockwise)

Preceding gene: 116328613

Following gene: 116328611

Centisome position: 63.75

GC content: 42.97

Gene sequence:

>384_bases
ATGTTCGCACATAAACTGAACGTATCCGTAATCTCTCCCGAAAAAATTCTTTATAAGGGCGAAGTGGATTCTTTGGTCGT
TCCGGGTAGCGAAGGATTCTTCGGAATCCTTCCCAATCATGCCCCTTTGGTCGCAACCTTAGGAATCGGGGTTTTGGAAA
TCCGTAAGGGAGAAAAACTAAAAAATATCTCCGTAGAAGGCGGATTTATCGAAGTCAAAGACAACACAGTCAGCATTCTT
ACCGATCACGGCGCATTGAAAGAAGACATCGATATAGAGGCCGAAAAAAAGGCTTTAGCCGAAGTAGAAAAGCTTTCTCC
GTCCGATTCTAAAAATCTTCTCCTCCAAAAAACAAAAACCCGAATTTTAGTCGCATCCCGCTAA

Upstream 100 bases:

>100_bases
ATTTCCGGAAATTACGACCACCTTCCCGAGCAGGCGTTTTATATGGTTGGGTCTATCGACGACGCGATTGAAAAAGCGAA
AGGTTATAAAGGATAAGTGC

Downstream 100 bases:

>100_bases
CTTTTTGGGGTGCTCTTTTCCGAAAATAGTAGCAGAGATTCTCTTTTCTCCGAATACAATGGAGAATTAGGAACGAAAAC
CTATGAAAACTAAAATCCGT

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MFAHKLNVSVISPEKILYKGEVDSLVVPGSEGFFGILPNHAPLVATLGIGVLEIRKGEKLKNISVEGGFIEVKDNTVSIL
TDHGALKEDIDIEAEKKALAEVEKLSPSDSKNLLLQKTKTRILVASR

Sequences:

>Translated_127_residues
MFAHKLNVSVISPEKILYKGEVDSLVVPGSEGFFGILPNHAPLVATLGIGVLEIRKGEKLKNISVEGGFIEVKDNTVSIL
TDHGALKEDIDIEAEKKALAEVEKLSPSDSKNLLLQKTKTRILVASR
>Mature_127_residues
MFAHKLNVSVISPEKILYKGEVDSLVVPGSEGFFGILPNHAPLVATLGIGVLEIRKGEKLKNISVEGGFIEVKDNTVSIL
TDHGALKEDIDIEAEKKALAEVEKLSPSDSKNLLLQKTKTRILVASR

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=102, Percent_Identity=34.3137254901961, Blast_Score=60, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_LEPBJ (Q04S19)

Other databases:

- EMBL:   CP000350
- RefSeq:   YP_801059.1
- ProteinModelPortal:   Q04S19
- SMR:   Q04S19
- STRING:   Q04S19
- GeneID:   4410536
- GenomeReviews:   CP000350_GR
- KEGG:   lbj:LBJ_1751
- eggNOG:   COG0355
- HOGENOM:   HBG663981
- OMA:   NNAEIGS
- PhylomeDB:   Q04S19
- ProtClustDB:   PRK13444
- BioCyc:   LBOR355277:LBJ_1751-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020546
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 13760; Mature: 13760

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAHKLNVSVISPEKILYKGEVDSLVVPGSEGFFGILPNHAPLVATLGIGVLEIRKGEKL
CCCEEEEEEEECCCCEEEECCCCEEEECCCCCEEEECCCCCCEEEECCCCEEEEECCCCE
KNISVEGGFIEVKDNTVSILTDHGALKEDIDIEAEKKALAEVEKLSPSDSKNLLLQKTKT
EEEEECCCEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCE
RILVASR
EEEEECC
>Mature Secondary Structure
MFAHKLNVSVISPEKILYKGEVDSLVVPGSEGFFGILPNHAPLVATLGIGVLEIRKGEKL
CCCEEEEEEEECCCCEEEECCCCEEEECCCCCEEEECCCCCCEEEECCCCEEEEECCCCE
KNISVEGGFIEVKDNTVSILTDHGALKEDIDIEAEKKALAEVEKLSPSDSKNLLLQKTKT
EEEEECCCEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCE
RILVASR
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA