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The map label for this gene is mreD

Identifier: 116328601

GI number: 116328601

Start: 2287142

End: 2287654

Strand: Reverse

Name: mreD

Synonym: LBL_1958

Alternate gene names: NA

Gene position: 2287654-2287142 (Counterclockwise)

Preceding gene: 116328602

Following gene: 116328600

Centisome position: 63.29

GC content: 42.11

Gene sequence:

>513_bases
ATGATCTTAGAAAAGCTCGTTATCGCAGTCGGCATCTTAATCGCGCACTTTTTAAATGGCTCGAATCTTTTCGAAATCGG
TTCGGCGATCAAACCGGACTTTATGATTCTTCTTGTGCTTTTTTTCGCTTTGAGAAGGGGAGCGCTCTACGGACTCTGGA
TCGGATTTTTCGGAGGCCTTTTGACGGATAGTGGACTCGGCGGTGAAATTGCGATCGGAAACGTGGTTACATATAAGATC
GGACTTCATTCCTTGACTTTTTGTCTGATCGGGTATCTTGTCGGAAAATTTGCTCGTTCCGCATATCATGAGAATTATTT
TTCGATTACGATCTATTCTCTTCTAATCACCTTTGTCACGAGGGTTGCCACGTATTATTTGTTCTCCTTATTTTTTCATG
AGAATATGAGTTATTCCTTATTCTTCACTTCGTTTTTTAATGCCCTCATAGCCCCGGCCTTCTTTTATGCCCTAACTTGG
ATCTATCAATTGGATCACATGGGGGACGCGTAA

Upstream 100 bases:

>100_bases
AAAATCAAACGAAAAATCCTCTGCCGCCTAATGGGAATCAGCCGCAAACGAATGCGCCAAAGAGCCCTTCGACTTCTGTT
CCGAGCGAGGAAGATTTGCA

Downstream 100 bases:

>100_bases
GTTGTTCGGCGGAGCGCAGTCTGCGTCGGAATACCGACTTGAAAAAAGTTTTCGTCTTCGTTTATATATTTTTTCCGGAC
TTGTGGTGTTTACGCTCGCC

Product: cell shape-determining protein

Products: NA

Alternate protein names: Rod Shape-Determining Protein MreD

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MILEKLVIAVGILIAHFLNGSNLFEIGSAIKPDFMILLVLFFALRRGALYGLWIGFFGGLLTDSGLGGEIAIGNVVTYKI
GLHSLTFCLIGYLVGKFARSAYHENYFSITIYSLLITFVTRVATYYLFSLFFHENMSYSLFFTSFFNALIAPAFFYALTW
IYQLDHMGDA

Sequences:

>Translated_170_residues
MILEKLVIAVGILIAHFLNGSNLFEIGSAIKPDFMILLVLFFALRRGALYGLWIGFFGGLLTDSGLGGEIAIGNVVTYKI
GLHSLTFCLIGYLVGKFARSAYHENYFSITIYSLLITFVTRVATYYLFSLFFHENMSYSLFFTSFFNALIAPAFFYALTW
IYQLDHMGDA
>Mature_170_residues
MILEKLVIAVGILIAHFLNGSNLFEIGSAIKPDFMILLVLFFALRRGALYGLWIGFFGGLLTDSGLGGEIAIGNVVTYKI
GLHSLTFCLIGYLVGKFARSAYHENYFSITIYSLLITFVTRVATYYLFSLFFHENMSYSLFFTSFFNALIAPAFFYALTW
IYQLDHMGDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19128; Mature: 19128

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILEKLVIAVGILIAHFLNGSNLFEIGSAIKPDFMILLVLFFALRRGALYGLWIGFFGGL
CHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LTDSGLGGEIAIGNVVTYKIGLHSLTFCLIGYLVGKFARSAYHENYFSITIYSLLITFVT
HCCCCCCCCEEECCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RVATYYLFSLFFHENMSYSLFFTSFFNALIAPAFFYALTWIYQLDHMGDA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MILEKLVIAVGILIAHFLNGSNLFEIGSAIKPDFMILLVLFFALRRGALYGLWIGFFGGL
CHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LTDSGLGGEIAIGNVVTYKIGLHSLTFCLIGYLVGKFARSAYHENYFSITIYSLLITFVT
HCCCCCCCCEEECCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RVATYYLFSLFFHENMSYSLFFTSFFNALIAPAFFYALTWIYQLDHMGDA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA