| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116328558
Identifier: 116328558
GI number: 116328558
Start: 2235145
End: 2235663
Strand: Direct
Name: 116328558
Synonym: LBL_1915
Alternate gene names: NA
Gene position: 2235145-2235663 (Clockwise)
Preceding gene: 116328557
Following gene: 116328567
Centisome position: 61.84
GC content: 40.08
Gene sequence:
>519_bases ATGAAAACGGCTTCCGTGTCCCAAAAAACTATTGTCCTTTTTAGAGTTTTTCTCTTTTCTTTGACTTTCTGTCTGACATC AAATTGTTTTAAACCTACCGGAGAATTCGGTTGGGCCTTACTTGATGAGGAAAAGCTCAACATTCTTGAAAAGAAAATTA TGACCGTCGGAGAATATACGATCACAAGGGAAAATTTGATTTTCCCGGACGACAAATCCATTTATTATATCTATCGATTC TCCAGATCCGTTTCAGAAACCGCGGTGACTTATGTGAGTTTAAGTCGCTTTCAACTCGGATACAATGAGATGGACGTTCT TCGAAAAAGACCAAACCCGATTTCCAAAACGATCGAAGGTTCTTTTCAAGGACTTACCCCCGGAAAGTATCTTCTCAAAA TCGCCTACGAAGGAGACGTGATTGACGAGGTTGAATTTTTGGTTCGTTCCACGCAAACACCTTATATTGAAGACATTCCC TCTCCATCGGACAATGACATCGAAAAAGCGATGAAGTAA
Upstream 100 bases:
>100_bases CGCAGTGGAAAACTTTTTATAAAAACGTCTCTCCGACTCCAAGAGAAAAAGACATTTCGAGTCAGGCTCGAGTAATTGAT TCTAACTCTTTGAGAGAAAA
Downstream 100 bases:
>100_bases AAAACAAATCCGCGAATATCACAATCTATGTTTCGATTTGTTGCCTTAAAAAAAACGTGAGTTCGGCGTAAGAATCCATG ATTCATTTTTCTGAAAAGAG
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKTASVSQKTIVLFRVFLFSLTFCLTSNCFKPTGEFGWALLDEEKLNILEKKIMTVGEYTITRENLIFPDDKSIYYIYRF SRSVSETAVTYVSLSRFQLGYNEMDVLRKRPNPISKTIEGSFQGLTPGKYLLKIAYEGDVIDEVEFLVRSTQTPYIEDIP SPSDNDIEKAMK
Sequences:
>Translated_172_residues MKTASVSQKTIVLFRVFLFSLTFCLTSNCFKPTGEFGWALLDEEKLNILEKKIMTVGEYTITRENLIFPDDKSIYYIYRF SRSVSETAVTYVSLSRFQLGYNEMDVLRKRPNPISKTIEGSFQGLTPGKYLLKIAYEGDVIDEVEFLVRSTQTPYIEDIP SPSDNDIEKAMK >Mature_172_residues MKTASVSQKTIVLFRVFLFSLTFCLTSNCFKPTGEFGWALLDEEKLNILEKKIMTVGEYTITRENLIFPDDKSIYYIYRF SRSVSETAVTYVSLSRFQLGYNEMDVLRKRPNPISKTIEGSFQGLTPGKYLLKIAYEGDVIDEVEFLVRSTQTPYIEDIP SPSDNDIEKAMK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19775; Mature: 19775
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTASVSQKTIVLFRVFLFSLTFCLTSNCFKPTGEFGWALLDEEKLNILEKKIMTVGEYT CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCEE ITRENLIFPDDKSIYYIYRFSRSVSETAVTYVSLSRFQLGYNEMDVLRKRPNPISKTIEG EECCCEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHCC SFQGLTPGKYLLKIAYEGDVIDEVEFLVRSTQTPYIEDIPSPSDNDIEKAMK CCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCC >Mature Secondary Structure MKTASVSQKTIVLFRVFLFSLTFCLTSNCFKPTGEFGWALLDEEKLNILEKKIMTVGEYT CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCEE ITRENLIFPDDKSIYYIYRFSRSVSETAVTYVSLSRFQLGYNEMDVLRKRPNPISKTIEG EECCCEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHCC SFQGLTPGKYLLKIAYEGDVIDEVEFLVRSTQTPYIEDIPSPSDNDIEKAMK CCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA