| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
Click here to switch to the map view.
The map label for this gene is fbp [H]
Identifier: 116328544
GI number: 116328544
Start: 2212412
End: 2212798
Strand: Direct
Name: fbp [H]
Synonym: LBL_1898
Alternate gene names: 116328544
Gene position: 2212412-2212798 (Clockwise)
Preceding gene: 116328543
Following gene: 116328545
Centisome position: 61.21
GC content: 43.67
Gene sequence:
>387_bases ATGAAATTGACACGTTTATTCATCTTAGCGATTTTTTGTGTCGCGATAGTTCCCACATTTGCAGAAGACTTAGTTATCAA AGATATTCGTATCGGAACCGGTAAAGAAGCATTTTCCGGATCGAACGTTACAGTGCACTATGTTGGAACGTTGGTTAGCG GTAAGAAGTTTGACAGTTCCAGAGATAGAAGAACTCCTTTTACTTTCAATTTGGGGGCGGGAGAAGTCATCAAAGGTTGG GATCGTGGAGTTCGAGGTATGAAAGAAGGCGGGATTCGTAAACTTACCATCCCACCCGAACTAGGTTACGGTTCGAGAGG TGCAGGTACGGCCATTCCTCCCAATTCCACTCTCATTTTTGAAGTGGAACTGCTTAAAGTGTACTGA
Upstream 100 bases:
>100_bases CCGTAAAAGGCGGAGGGGCTTCCGGTAAGATTCATGGAAATCAGTCGAAGTTTGGAGGATTTTCAGGCGCTGGTGTAAGA AGAACCGGAGGAAGAGGAAA
Downstream 100 bases:
>100_bases GTTTTTTTCTTTTGTAACAGATTTTACCGGATTCTGACATTGGATTTGGTCAGCTTTCCGGTTCTAATCTATCGTAAAAA GGAGGAGCCTTCCGATTGCG
Product: FKBP-type peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase; PPIase; Rotamase [H]
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MKLTRLFILAIFCVAIVPTFAEDLVIKDIRIGTGKEAFSGSNVTVHYVGTLVSGKKFDSSRDRRTPFTFNLGAGEVIKGW DRGVRGMKEGGIRKLTIPPELGYGSRGAGTAIPPNSTLIFEVELLKVY
Sequences:
>Translated_128_residues MKLTRLFILAIFCVAIVPTFAEDLVIKDIRIGTGKEAFSGSNVTVHYVGTLVSGKKFDSSRDRRTPFTFNLGAGEVIKGW DRGVRGMKEGGIRKLTIPPELGYGSRGAGTAIPPNSTLIFEVELLKVY >Mature_128_residues MKLTRLFILAIFCVAIVPTFAEDLVIKDIRIGTGKEAFSGSNVTVHYVGTLVSGKKFDSSRDRRTPFTFNLGAGEVIKGW DRGVRGMKEGGIRKLTIPPELGYGSRGAGTAIPPNSTLIFEVELLKVY
Specific function: PPIases accelerate the folding of proteins [H]
COG id: COG0545
COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 1
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase FKBP-type domain [H]
Homologues:
Organism=Homo sapiens, GI206725530, Length=136, Percent_Identity=44.1176470588235, Blast_Score=108, Evalue=2e-24, Organism=Homo sapiens, GI17149844, Length=136, Percent_Identity=44.1176470588235, Blast_Score=108, Evalue=2e-24, Organism=Homo sapiens, GI17149842, Length=136, Percent_Identity=44.1176470588235, Blast_Score=108, Evalue=2e-24, Organism=Homo sapiens, GI224809329, Length=97, Percent_Identity=55.6701030927835, Blast_Score=107, Evalue=3e-24, Organism=Homo sapiens, GI224809327, Length=97, Percent_Identity=55.6701030927835, Blast_Score=107, Evalue=3e-24, Organism=Homo sapiens, GI4758384, Length=97, Percent_Identity=55.6701030927835, Blast_Score=107, Evalue=3e-24, Organism=Homo sapiens, GI4503729, Length=114, Percent_Identity=49.1228070175439, Blast_Score=105, Evalue=8e-24, Organism=Homo sapiens, GI224809331, Length=97, Percent_Identity=55.6701030927835, Blast_Score=103, Evalue=3e-23, Organism=Homo sapiens, GI17149836, Length=88, Percent_Identity=55.6818181818182, Blast_Score=100, Evalue=3e-22, Organism=Homo sapiens, GI4503725, Length=88, Percent_Identity=55.6818181818182, Blast_Score=100, Evalue=3e-22, Organism=Homo sapiens, GI4758380, Length=88, Percent_Identity=53.4090909090909, Blast_Score=97, Evalue=4e-21, Organism=Homo sapiens, GI192448443, Length=109, Percent_Identity=46.7889908256881, Blast_Score=90, Evalue=5e-19, Organism=Homo sapiens, GI33469985, Length=90, Percent_Identity=45.5555555555556, Blast_Score=82, Evalue=9e-17, Organism=Homo sapiens, GI8923659, Length=91, Percent_Identity=48.3516483516484, Blast_Score=79, Evalue=1e-15, Organism=Homo sapiens, GI150010552, Length=113, Percent_Identity=38.0530973451327, Blast_Score=74, Evalue=3e-14, Organism=Homo sapiens, GI4503727, Length=96, Percent_Identity=39.5833333333333, Blast_Score=71, Evalue=2e-13, Organism=Homo sapiens, GI206725547, Length=99, Percent_Identity=42.4242424242424, Blast_Score=70, Evalue=6e-13, Organism=Homo sapiens, GI31317231, Length=100, Percent_Identity=43, Blast_Score=67, Evalue=3e-12, Organism=Homo sapiens, GI206725544, Length=103, Percent_Identity=36.8932038834951, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI146229346, Length=103, Percent_Identity=36.8932038834951, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1789745, Length=111, Percent_Identity=46.8468468468468, Blast_Score=82, Evalue=9e-18, Organism=Escherichia coli, GI87082390, Length=104, Percent_Identity=46.1538461538462, Blast_Score=81, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17540882, Length=127, Percent_Identity=46.4566929133858, Blast_Score=114, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71993519, Length=89, Percent_Identity=62.9213483146067, Blast_Score=109, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17561782, Length=88, Percent_Identity=56.8181818181818, Blast_Score=100, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17561778, Length=96, Percent_Identity=43.75, Blast_Score=80, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71993555, Length=75, Percent_Identity=53.3333333333333, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17506169, Length=93, Percent_Identity=41.9354838709677, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17506167, Length=93, Percent_Identity=41.9354838709677, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17561780, Length=102, Percent_Identity=40.1960784313725, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6324194, Length=89, Percent_Identity=57.3033707865169, Blast_Score=102, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6320727, Length=107, Percent_Identity=50.4672897196262, Blast_Score=99, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6323566, Length=104, Percent_Identity=47.1153846153846, Blast_Score=86, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6323482, Length=104, Percent_Identity=46.1538461538462, Blast_Score=84, Evalue=9e-18, Organism=Drosophila melanogaster, GI281363946, Length=132, Percent_Identity=50, Blast_Score=127, Evalue=2e-30, Organism=Drosophila melanogaster, GI17352457, Length=132, Percent_Identity=50, Blast_Score=127, Evalue=2e-30, Organism=Drosophila melanogaster, GI24655568, Length=89, Percent_Identity=60.6741573033708, Blast_Score=109, Evalue=5e-25, Organism=Drosophila melanogaster, GI24647110, Length=103, Percent_Identity=54.3689320388349, Blast_Score=106, Evalue=4e-24, Organism=Drosophila melanogaster, GI21356629, Length=129, Percent_Identity=49.6124031007752, Blast_Score=101, Evalue=1e-22, Organism=Drosophila melanogaster, GI24583150, Length=103, Percent_Identity=51.4563106796116, Blast_Score=99, Evalue=9e-22,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001179 [H]
Pfam domain/function: PF00254 FKBP_C [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 13948; Mature: 13948
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS50059 FKBP_PPIASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTRLFILAIFCVAIVPTFAEDLVIKDIRIGTGKEAFSGSNVTVHYVGTLVSGKKFDSS CCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCC RDRRTPFTFNLGAGEVIKGWDRGVRGMKEGGIRKLTIPPELGYGSRGAGTAIPPNSTLIF CCCCCCEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEE EVELLKVY EEEEEEEC >Mature Secondary Structure MKLTRLFILAIFCVAIVPTFAEDLVIKDIRIGTGKEAFSGSNVTVHYVGTLVSGKKFDSS CCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCC RDRRTPFTFNLGAGEVIKGWDRGVRGMKEGGIRKLTIPPELGYGSRGAGTAIPPNSTLIF CCCCCCEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEE EVELLKVY EEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]