| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116328512
Identifier: 116328512
GI number: 116328512
Start: 2170147
End: 2170461
Strand: Reverse
Name: 116328512
Synonym: LBL_1862
Alternate gene names: NA
Gene position: 2170461-2170147 (Counterclockwise)
Preceding gene: 116328513
Following gene: 116328508
Centisome position: 60.05
GC content: 45.71
Gene sequence:
>315_bases ATGGCGAGCACACAAACTCCTGACTTAGATGAGATTACCTCCACAAAGTCTACGGGAGGACCTTGGAGGGTGGTTCTTTG GGACGATAACGAGCATACCTACGAATATGTTATCGAAATGCTCGTGGAAATTTGTATGATGACTGTCGAAAAGGCGTTCT TGCATGCAGTTCAAGTCGATCAAGAAAAACGTACAATCGTTTTTTCCGGGGAGTTCGAGCACGCGGAACACGTCCAAGAA AGAATTCTCACCTATGGAGCCGATCCGAGAATGTCCAACTCTAAAGGTTCCATGAGCGCTACTCTAGAAAAGTAA
Upstream 100 bases:
>100_bases TTCATATGTTTTTTTCTTTTTTTGATAGAGGGAAGAATTTTGTGAAGGTTCTTTTAGAGAGAAATTTTTTTATTCCTATT TTCTTGGTAAAATTGGCGAG
Downstream 100 bases:
>100_bases GATCAGAGAAAAACAATTTACTATCTCTCATTTTTTTCCGAATGCGGTTTGAAAATCTTTGGTTTTTTGATTAGATTAAC GTGAGTTCGGTGTAAGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MASTQTPDLDEITSTKSTGGPWRVVLWDDNEHTYEYVIEMLVEICMMTVEKAFLHAVQVDQEKRTIVFSGEFEHAEHVQE RILTYGADPRMSNSKGSMSATLEK
Sequences:
>Translated_104_residues MASTQTPDLDEITSTKSTGGPWRVVLWDDNEHTYEYVIEMLVEICMMTVEKAFLHAVQVDQEKRTIVFSGEFEHAEHVQE RILTYGADPRMSNSKGSMSATLEK >Mature_103_residues ASTQTPDLDEITSTKSTGGPWRVVLWDDNEHTYEYVIEMLVEICMMTVEKAFLHAVQVDQEKRTIVFSGEFEHAEHVQER ILTYGADPRMSNSKGSMSATLEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11854; Mature: 11723
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTQTPDLDEITSTKSTGGPWRVVLWDDNEHTYEYVIEMLVEICMMTVEKAFLHAVQVD CCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC QEKRTIVFSGEFEHAEHVQERILTYGADPRMSNSKGSMSATLEK CCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCC >Mature Secondary Structure ASTQTPDLDEITSTKSTGGPWRVVLWDDNEHTYEYVIEMLVEICMMTVEKAFLHAVQVD CCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC QEKRTIVFSGEFEHAEHVQERILTYGADPRMSNSKGSMSATLEK CCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA