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The map label for this gene is fliQ [H]

Identifier: 116328497

GI number: 116328497

Start: 2149705

End: 2149968

Strand: Reverse

Name: fliQ [H]

Synonym: LBL_1845

Alternate gene names: 116328497

Gene position: 2149968-2149705 (Counterclockwise)

Preceding gene: 116328498

Following gene: 116328496

Centisome position: 59.48

GC content: 43.18

Gene sequence:

>264_bases
ATGACGGAGCTCGATGCGATGACTCTTATACGGGATTCGCTTTATATCACTCTGAAAATTTCGTCTCCGATTCTACTTAC
CGCTTTGGTTGTGGGTTTGATCATCGGGATTTTACAGACTACCACCTCGATCCAGGAACCTACGATCGCTTTCGTTCCCA
AACTCGCGGCTGTTTTTGTCGTGATTGTGATCTTTTCCTCTTGGATGATTCAGACGATGACGGATTATACTCGGAATTTA
TTTCTGATGATCGAGAAATTTTAG

Upstream 100 bases:

>100_bases
TGTTACCTCCTGTGATGGTCAGCCTTCCGTTTAAGTTGATTCTGTTCGTTCTTGTGGACGGCTGGAATCTAATCGTTTAC
GAATTGGTTCGGAGTTATAA

Downstream 100 bases:

>100_bases
AATATTATGGAATACTTTATCAATCATTTTCAAACATTTCTTTTGATCCTTTCGAGATTGATGGGGTTGTTGTCCGTTGC
TCCCGTATTCTCCTATCCGT

Product: endoflagellar biosynthesis pathway protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MTELDAMTLIRDSLYITLKISSPILLTALVVGLIIGILQTTTSIQEPTIAFVPKLAAVFVVIVIFSSWMIQTMTDYTRNL
FLMIEKF

Sequences:

>Translated_87_residues
MTELDAMTLIRDSLYITLKISSPILLTALVVGLIIGILQTTTSIQEPTIAFVPKLAAVFVVIVIFSSWMIQTMTDYTRNL
FLMIEKF
>Mature_86_residues
TELDAMTLIRDSLYITLKISSPILLTALVVGLIIGILQTTTSIQEPTIAFVPKLAAVFVVIVIFSSWMIQTMTDYTRNLF
LMIEKF

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1987

COG function: function code NU; Flagellar biosynthesis pathway, component FliQ

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191
- InterPro:   IPR006305 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 9769; Mature: 9638

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELDAMTLIRDSLYITLKISSPILLTALVVGLIIGILQTTTSIQEPTIAFVPKLAAVFV
CCCHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VIVIFSSWMIQTMTDYTRNLFLMIEKF
HHHHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure 
TELDAMTLIRDSLYITLKISSPILLTALVVGLIIGILQTTTSIQEPTIAFVPKLAAVFV
CCHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VIVIFSSWMIQTMTDYTRNLFLMIEKF
HHHHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]