| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116328470
Identifier: 116328470
GI number: 116328470
Start: 2113135
End: 2114640
Strand: Direct
Name: 116328470
Synonym: LBL_1815
Alternate gene names: NA
Gene position: 2113135-2114640 (Clockwise)
Preceding gene: 116328469
Following gene: 116328473
Centisome position: 58.46
GC content: 46.41
Gene sequence:
>1506_bases ATGAGTTTAAATTCCCGTTTTGTTTTACCTACTCGGATCTTTTTCGGCTTTTTATCGGGAAAGATCTTTCGGGTCATTTT ATTTCTTGTTTTTTTATCGACACAAACCTGCACTCCCAAGGAAAAATTCTGTTCTTCTAAAAATTGCCAAATCGGAGCCG TTCTGATGGCAATCCTTTCGGAATCCACGGATATGGAATGGGGATACGAAGACGGAGAAGAATACCAAGGTGGTAGGACC ATGACGAGTTTCGAATTCGGAAACATGGCATTCCGGCAATTTGCCCGAAATGCCCCTTTGAGATCTATTTCTGAATATAC GGTTGGACAAACCGTATTCGAAGTTCCTTGGATTCCCGGCTTTTCCGCCGCAATTCCGGATAGGGACGGACTCGGTCCCC TCTTCCATACGAACGCATGCTCCGCTTGTCATGCCGCAAACGGAAGAACTCTTGAAGAAGATCAAGAGAACTTAACCTTC AGTCTCGTTCGACTCAGCGTCGGAAACGATTCAAACCGGGAAGAACCCAGCTACGGAGGACAATTCCAGCCTAACTCCGT CCAAGGAGTGGTCAAGGAAGGAGACGCCACTCTCACATATAGGGAATTTGCCGGAGAATTTGAAGACGGCACAAAATATA CATTACGTTATCCTTTATTAGAATTTTCAAATTTAGGATATGGTCCTTTTTCAAACGACACAAGAACCTCCGTTCGAGTC CCACCTCAGGTCATAGGACTCGGGCTTTTGGAAACAATTCCCGAAGATACGATTCTCTCTCTCGCCGACCCGGATGACAG GGACGGAAACGGAATTTCGGGTCGACCGAACTATGTCCGAAATCTAAACGGAATCGGAACGACCCTGGGAAGGTTCGGTT GGAAAGCAAATAACACCGATTTGATGAGACAAAGCTCTGCGGCCTTTTTAGGAGATTTGGGAATCACCTCTCCTATGTTT CGAAACGAGAACTGTACGAACGCCCAGGCCCAGTGTCGGGCTTCCAGAAACGGCGGTTCTCCCGAGATTGCTCAAAACAA AATCACCGCAATCACGAACTACCTGAAACTCATCGCAGTTCCGGCAAGAAGAAAGGCCGATAATGCAAGCGTCCTCTTGG GTAAGAAAATCTTTTTCCAAGCAGGATGCAAAAATTGTCATCTTCCAAAGACTCAAACCGGTCTGAACGAAAACTTCCCC GAGCTATCTTTCCAAACCATCCGCCCCTATACGGATCTTTTATTACACGACATGGGAGACGGACTCGCGGATAATAGACC GGATGAAGAAGCAAACGGAAGAGAATGGAGAACCCCTCCTCTCTGGGGAATCGGTTTATTCGAAGTCGTAAACGGTCATA CGAGATATCTTCACGACGGAAGAGCAAGAAATCTAATGGAAGCGATCCTCTGGCACGGAGGAGAAGCGGAGTCGAGCAAA GATTACATTCTCAAATTGAATATTCGGGATCGAACCCATCTCCTTAATTTTTTGAAGTCGCTTTAA
Upstream 100 bases:
>100_bases CTGGAATTTCAAAGGCTCTCTAGGAAGGCAGGATCTACAGGCAAATTGGGGCGCCCCGAATCCCGTATCAATTAAACTTC CTTAATATTCAAGATTTAAA
Downstream 100 bases:
>100_bases AAAATTCGGGCTCGCAACAAAACGTCTTAATATCCTATAGAAGTAATGTAATAAACAACTCAATTCGTGAACTTGGACTT GTCGCACAGTAATGACGATA
Product: Thiol oxidoreductase
Products: NA
Alternate protein names: Lipoprotein; Thiol Oxidoreductase-Like; Thiol Oxidoreductase-Like Protein; Exported Protein; Signal Peptide
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MSLNSRFVLPTRIFFGFLSGKIFRVILFLVFLSTQTCTPKEKFCSSKNCQIGAVLMAILSESTDMEWGYEDGEEYQGGRT MTSFEFGNMAFRQFARNAPLRSISEYTVGQTVFEVPWIPGFSAAIPDRDGLGPLFHTNACSACHAANGRTLEEDQENLTF SLVRLSVGNDSNREEPSYGGQFQPNSVQGVVKEGDATLTYREFAGEFEDGTKYTLRYPLLEFSNLGYGPFSNDTRTSVRV PPQVIGLGLLETIPEDTILSLADPDDRDGNGISGRPNYVRNLNGIGTTLGRFGWKANNTDLMRQSSAAFLGDLGITSPMF RNENCTNAQAQCRASRNGGSPEIAQNKITAITNYLKLIAVPARRKADNASVLLGKKIFFQAGCKNCHLPKTQTGLNENFP ELSFQTIRPYTDLLLHDMGDGLADNRPDEEANGREWRTPPLWGIGLFEVVNGHTRYLHDGRARNLMEAILWHGGEAESSK DYILKLNIRDRTHLLNFLKSL
Sequences:
>Translated_501_residues MSLNSRFVLPTRIFFGFLSGKIFRVILFLVFLSTQTCTPKEKFCSSKNCQIGAVLMAILSESTDMEWGYEDGEEYQGGRT MTSFEFGNMAFRQFARNAPLRSISEYTVGQTVFEVPWIPGFSAAIPDRDGLGPLFHTNACSACHAANGRTLEEDQENLTF SLVRLSVGNDSNREEPSYGGQFQPNSVQGVVKEGDATLTYREFAGEFEDGTKYTLRYPLLEFSNLGYGPFSNDTRTSVRV PPQVIGLGLLETIPEDTILSLADPDDRDGNGISGRPNYVRNLNGIGTTLGRFGWKANNTDLMRQSSAAFLGDLGITSPMF RNENCTNAQAQCRASRNGGSPEIAQNKITAITNYLKLIAVPARRKADNASVLLGKKIFFQAGCKNCHLPKTQTGLNENFP ELSFQTIRPYTDLLLHDMGDGLADNRPDEEANGREWRTPPLWGIGLFEVVNGHTRYLHDGRARNLMEAILWHGGEAESSK DYILKLNIRDRTHLLNFLKSL >Mature_500_residues SLNSRFVLPTRIFFGFLSGKIFRVILFLVFLSTQTCTPKEKFCSSKNCQIGAVLMAILSESTDMEWGYEDGEEYQGGRTM TSFEFGNMAFRQFARNAPLRSISEYTVGQTVFEVPWIPGFSAAIPDRDGLGPLFHTNACSACHAANGRTLEEDQENLTFS LVRLSVGNDSNREEPSYGGQFQPNSVQGVVKEGDATLTYREFAGEFEDGTKYTLRYPLLEFSNLGYGPFSNDTRTSVRVP PQVIGLGLLETIPEDTILSLADPDDRDGNGISGRPNYVRNLNGIGTTLGRFGWKANNTDLMRQSSAAFLGDLGITSPMFR NENCTNAQAQCRASRNGGSPEIAQNKITAITNYLKLIAVPARRKADNASVLLGKKIFFQAGCKNCHLPKTQTGLNENFPE LSFQTIRPYTDLLLHDMGDGLADNRPDEEANGREWRTPPLWGIGLFEVVNGHTRYLHDGRARNLMEAILWHGGEAESSKD YILKLNIRDRTHLLNFLKSL
Specific function: Unknown
COG id: COG3488
COG function: function code C; Predicted thiol oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55712; Mature: 55581
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNSRFVLPTRIFFGFLSGKIFRVILFLVFLSTQTCTPKEKFCSSKNCQIGAVLMAILS CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHH ESTDMEWGYEDGEEYQGGRTMTSFEFGNMAFRQFARNAPLRSISEYTVGQTVFEVPWIPG CCCCCCCCCCCCHHHCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCCC FSAAIPDRDGLGPLFHTNACSACHAANGRTLEEDQENLTFSLVRLSVGNDSNREEPSYGG CCCCCCCCCCCCCCEECCCHHHHHCCCCCCCHHHHHCCEEEEEEEEECCCCCCCCCCCCC QFQPNSVQGVVKEGDATLTYREFAGEFEDGTKYTLRYPLLEFSNLGYGPFSNDTRTSVRV CCCCCCHHHHEECCCCEEEHHHHCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCEEEC PPQVIGLGLLETIPEDTILSLADPDDRDGNGISGRPNYVRNLNGIGTTLGRFGWKANNTD CHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCHH LMRQSSAAFLGDLGITSPMFRNENCTNAQAQCRASRNGGSPEIAQNKITAITNYLKLIAV HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC PARRKADNASVLLGKKIFFQAGCKNCHLPKTQTGLNENFPELSFQTIRPYTDLLLHDMGD CCCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHCC GLADNRPDEEANGREWRTPPLWGIGLFEVVNGHTRYLHDGRARNLMEAILWHGGEAESSK CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHEECCCHHHHHHHHHHHCCCCCCCCC DYILKLNIRDRTHLLNFLKSL CEEEEEECCHHHHHHHHHHHC >Mature Secondary Structure SLNSRFVLPTRIFFGFLSGKIFRVILFLVFLSTQTCTPKEKFCSSKNCQIGAVLMAILS CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHH ESTDMEWGYEDGEEYQGGRTMTSFEFGNMAFRQFARNAPLRSISEYTVGQTVFEVPWIPG CCCCCCCCCCCCHHHCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCCC FSAAIPDRDGLGPLFHTNACSACHAANGRTLEEDQENLTFSLVRLSVGNDSNREEPSYGG CCCCCCCCCCCCCCEECCCHHHHHCCCCCCCHHHHHCCEEEEEEEEECCCCCCCCCCCCC QFQPNSVQGVVKEGDATLTYREFAGEFEDGTKYTLRYPLLEFSNLGYGPFSNDTRTSVRV CCCCCCHHHHEECCCCEEEHHHHCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCEEEC PPQVIGLGLLETIPEDTILSLADPDDRDGNGISGRPNYVRNLNGIGTTLGRFGWKANNTD CHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCHH LMRQSSAAFLGDLGITSPMFRNENCTNAQAQCRASRNGGSPEIAQNKITAITNYLKLIAV HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC PARRKADNASVLLGKKIFFQAGCKNCHLPKTQTGLNENFPELSFQTIRPYTDLLLHDMGD CCCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHCC GLADNRPDEEANGREWRTPPLWGIGLFEVVNGHTRYLHDGRARNLMEAILWHGGEAESSK CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHEECCCHHHHHHHHHHHCCCCCCCCC DYILKLNIRDRTHLLNFLKSL CEEEEEECCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA