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The map label for this gene is 116328469

Identifier: 116328469

GI number: 116328469

Start: 2111599

End: 2113119

Strand: Direct

Name: 116328469

Synonym: LBL_1814

Alternate gene names: NA

Gene position: 2111599-2113119 (Clockwise)

Preceding gene: 116328467

Following gene: 116328470

Centisome position: 58.42

GC content: 44.84

Gene sequence:

>1521_bases
TTGAAACGAAAAGTTACATTTATTCTGTCTATCATCTTGGCTCTTAGCTGTAAGCCGAATTCACGTCTTGATTTGATTCC
CTTCTTTCTGTTAGGAATCGGCGCCAATCAAACCGAGTCTGACCAAAGTTCTTTCCAAATTCTTTTTCCCAAAGAGGGAG
AAATCATTACTGTTTACCAATTGGAAGCGACGATCCAAACTGATATATCAGGGGAATTCGAGATCTATGATGAAGAACAA
AAACTTTTTTCCGTTCCGATCCATTCCCCCACTTCTCAAACATTCCCTCCTTTCAAACCCAAAAACGGAGAGAATACGAT
CCAAGTTCGTTTTAAAAAACCGGACGGAACGATTCTTCAAAAAGAAGTAAACTTCTATTTCGGAACCAAACTCAGTGCAG
GCGGAGCTCACTCGGGTTTTTTGAAAAATGGAGAAGTTTATACGGTCGGTAGAAACAATTTTGGCCAACTCGGAACCGGC
AATTCCACGGGAGATGAGAATAATGACGTGATCGTAAAACTCAATTCGATCAGTAATATTTTTAGCATTCATTTCAATCA
AAATAATTCTATGGCGATTACAAAAAATGGAAGAGTCTATACCTGGGGAAATAACGCGAAAGGACAATTAGGTATCGGAA
ATAACAACACGAATCCGGCGAATCCTCGAGCAGCGGGAAATAGACAACCCCCTACTTTAGTTCCAGGAATCAACGACGCG
GTTATGGGAGCTTACGGCTTCAATCATGCTCTGATCTTGAAATCGGATGGAACCGTTGTCGCTTTCGGTCAAAACAACGT
GGGTCAACTGGGAAACGGAGCGAACGATTTGAACGCTGATTCGTTTTCTATGAACCCGGTAGCAGTCGTGGGTCTTAGTG
ACGTCATTCAAGTAATTGCCGGCTCGGAACATTCAGCGGCGCTTACCAAAAGCGGAGAAGTTTATGTCTGGGGCAGAAAC
CAATACGGGAACCTCGGTAACGGAAGACTTTCAGCCGCCAACGCGATCCAGTCTACCCCCGTAAAAGTCGAGGGACTTTC
CGGAATCAAACAGATCGCAAACGGAAGGGATCATATTCTCGCATTGGCGTCGGACGGAAGAATTTATTCCTGGGGACTAA
ACGCAAGCGGCCAGTTGGGAATCGGAGGAAACGGCTCTCCAAACCCGACGCCCAATCCAACACAAGTTTTGAATATTACA
AATGCTTCATCCATTTGGGCGGGAGGAACTCAAAGTTTTTCGATCTTAAAAAACGGAGAAGTGAAAGGTTGGGGAGCAAA
CGGTAACACCGCAAATTTAGCGATTGGAGAAACGAACACCCTAAAAGTCTACGAACCGAACAAAGCGGTGGTCGGAATCG
ACAATGTCATTCATTTTGGTTGTGGAGCGACTCATAACTTCGCCTTACTCGGAAACGGAGAAATCTACGGCTGGGGCTGG
AATTTCAAAGGCTCTCTAGGAAGGCAGGATCTACAGGCAAATTGGGGCGCCCCGAATCCCGTATCAATTAAACTTCCTTA
A

Upstream 100 bases:

>100_bases
TACAGACTAATAAAATCCAAAAATTCTTGACTTCACATTCTGTAGTTTTTTTTTTGAAATCAACAATGATACCAAGACTC
ATTATCAAAAAGAGGCGATT

Downstream 100 bases:

>100_bases
TATTCAAGATTTAAAATGAGTTTAAATTCCCGTTTTGTTTTACCTACTCGGATCTTTTTCGGCTTTTTATCGGGAAAGAT
CTTTCGGGTCATTTTATTTC

Product: RCC1 domain-containing protein

Products: NA

Alternate protein names: BNR Repeat-Containing Protein; Alpha-Tubulin Suppressor; Cell Wall Anchor Domain-Containing Protein; S-Layer Domain Protein; RCC1 Repeat-Containing Protein; RCC1 Repeat Protein; Fibronectin Type III Domain-Containing Protein; S-Layer Domain-Containing Protein; RCC1 Domain-Containing Protein Alpha-Tubulin Suppressor; Bnr Repeat Domain Protein; RCC1 Repeat Domain Protein; IPT/TIG Domain Protein; BNR Repeat Domain Protein; BNR Repeat Containing Protein; Cellulosome Dockerin Type I; ATS1 Domain Repeat Lipoprotein; Regulator Of Chromosome Condensation-Like Protein; RCC1 Domain-Containing Protein; Rhs Family Protein; Cysteine-Rich Repeat Protein; Ig Domain-Containing Domain-Containing Protein; Cell Surface Receptor IPT/TIG Domain-Containing Protein; Immunoglobulin-Like; BLIP-II Repeat-Containing Protein; Serine/Threonine Protein Kinase; Copper Amine Oxidase Domain Protein; Ig Domain Domain Protein; Hyalin; RCC1 Repeat- And Reductase Domain-Containing Protein; Immunoglobulin I-Set Domain-Containing Protein; Ig Family Protein; ATS1 Domain Repeat Protein; Copper Amine Oxidase Domain-Containing Protein; Lipoprotein; BNR Repeat Domain-Containing Protein

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MKRKVTFILSIILALSCKPNSRLDLIPFFLLGIGANQTESDQSSFQILFPKEGEIITVYQLEATIQTDISGEFEIYDEEQ
KLFSVPIHSPTSQTFPPFKPKNGENTIQVRFKKPDGTILQKEVNFYFGTKLSAGGAHSGFLKNGEVYTVGRNNFGQLGTG
NSTGDENNDVIVKLNSISNIFSIHFNQNNSMAITKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDA
VMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMNPVAVVGLSDVIQVIAGSEHSAALTKSGEVYVWGRN
QYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHILALASDGRIYSWGLNASGQLGIGGNGSPNPTPNPTQVLNIT
NASSIWAGGTQSFSILKNGEVKGWGANGNTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGNGEIYGWGW
NFKGSLGRQDLQANWGAPNPVSIKLP

Sequences:

>Translated_506_residues
MKRKVTFILSIILALSCKPNSRLDLIPFFLLGIGANQTESDQSSFQILFPKEGEIITVYQLEATIQTDISGEFEIYDEEQ
KLFSVPIHSPTSQTFPPFKPKNGENTIQVRFKKPDGTILQKEVNFYFGTKLSAGGAHSGFLKNGEVYTVGRNNFGQLGTG
NSTGDENNDVIVKLNSISNIFSIHFNQNNSMAITKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDA
VMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMNPVAVVGLSDVIQVIAGSEHSAALTKSGEVYVWGRN
QYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHILALASDGRIYSWGLNASGQLGIGGNGSPNPTPNPTQVLNIT
NASSIWAGGTQSFSILKNGEVKGWGANGNTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGNGEIYGWGW
NFKGSLGRQDLQANWGAPNPVSIKLP
>Mature_506_residues
MKRKVTFILSIILALSCKPNSRLDLIPFFLLGIGANQTESDQSSFQILFPKEGEIITVYQLEATIQTDISGEFEIYDEEQ
KLFSVPIHSPTSQTFPPFKPKNGENTIQVRFKKPDGTILQKEVNFYFGTKLSAGGAHSGFLKNGEVYTVGRNNFGQLGTG
NSTGDENNDVIVKLNSISNIFSIHFNQNNSMAITKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDA
VMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMNPVAVVGLSDVIQVIAGSEHSAALTKSGEVYVWGRN
QYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHILALASDGRIYSWGLNASGQLGIGGNGSPNPTPNPTQVLNIT
NASSIWAGGTQSFSILKNGEVKGWGANGNTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGNGEIYGWGW
NFKGSLGRQDLQANWGAPNPVSIKLP

Specific function: Unknown

COG id: COG5184

COG function: function code DZ; Alpha-tubulin suppressor and related RCC1 domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI126032348, Length=368, Percent_Identity=30.7065217391304, Blast_Score=132, Evalue=9e-31,
Organism=Homo sapiens, GI126131099, Length=291, Percent_Identity=32.3024054982818, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI37620181, Length=323, Percent_Identity=32.8173374613003, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI63025188, Length=323, Percent_Identity=32.8173374613003, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI4557445, Length=294, Percent_Identity=31.9727891156463, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI61563742, Length=254, Percent_Identity=31.8897637795276, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI259089405, Length=254, Percent_Identity=31.8897637795276, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI6912330, Length=390, Percent_Identity=27.4358974358974, Blast_Score=113, Evalue=5e-25,
Organism=Homo sapiens, GI57242759, Length=268, Percent_Identity=33.955223880597, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI7657152, Length=299, Percent_Identity=29.0969899665552, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI110825982, Length=273, Percent_Identity=30.03663003663, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI78190492, Length=257, Percent_Identity=30.3501945525292, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI4506581, Length=257, Percent_Identity=30.3501945525292, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI114796646, Length=333, Percent_Identity=28.8288288288288, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI4502801, Length=333, Percent_Identity=28.8288288288288, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI114796642, Length=333, Percent_Identity=28.8288288288288, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI209969703, Length=265, Percent_Identity=29.0566037735849, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI29789090, Length=265, Percent_Identity=29.0566037735849, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI114796644, Length=314, Percent_Identity=29.2993630573248, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI30039692, Length=279, Percent_Identity=27.5985663082437, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI13540582, Length=267, Percent_Identity=28.8389513108614, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI169170558, Length=261, Percent_Identity=27.5862068965517, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI169171160, Length=261, Percent_Identity=27.5862068965517, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI310110730, Length=171, Percent_Identity=32.1637426900585, Blast_Score=67, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17510153, Length=290, Percent_Identity=31.0344827586207, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI71988539, Length=358, Percent_Identity=25.4189944134078, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI71994328, Length=355, Percent_Identity=26.4788732394366, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193203348, Length=323, Percent_Identity=26.3157894736842, Blast_Score=69, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6321341, Length=343, Percent_Identity=25.3644314868805, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281361147, Length=318, Percent_Identity=32.7044025157233, Blast_Score=135, Evalue=6e-32,
Organism=Drosophila melanogaster, GI24655113, Length=358, Percent_Identity=28.2122905027933, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24655115, Length=358, Percent_Identity=28.2122905027933, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI19920516, Length=319, Percent_Identity=27.8996865203762, Blast_Score=105, Evalue=9e-23,
Organism=Drosophila melanogaster, GI24658888, Length=356, Percent_Identity=25.8426966292135, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24658881, Length=356, Percent_Identity=25.8426966292135, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI18859625, Length=356, Percent_Identity=25.8426966292135, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI116008159, Length=110, Percent_Identity=40, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24582121, Length=328, Percent_Identity=25.609756097561, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI20129257, Length=328, Percent_Identity=25.609756097561, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24649791, Length=262, Percent_Identity=26.7175572519084, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24580714, Length=275, Percent_Identity=28, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21355837, Length=159, Percent_Identity=32.0754716981132, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53806; Mature: 53806

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50012 RCC1_3 ; PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKVTFILSIILALSCKPNSRLDLIPFFLLGIGANQTESDQSSFQILFPKEGEIITVYQ
CCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEE
LEATIQTDISGEFEIYDEEQKLFSVPIHSPTSQTFPPFKPKNGENTIQVRFKKPDGTILQ
EEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEE
KEVNFYFGTKLSAGGAHSGFLKNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNI
EEEEEEEECEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEE
FSIHFNQNNSMAITKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDA
EEEEECCCCCEEEEECCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCC
VMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMNPVAVVGLSDVIQVIA
EEEECCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHC
GSEHSAALTKSGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL
CCCCCEEEECCCCEEEEECCCCCCCCCCCEEHHHHHCCCCEEEECCHHHHHHHCCCEEEE
ALASDGRIYSWGLNASGQLGIGGNGSPNPTPNPTQVLNITNASSIWAGGTQSFSILKNGE
EEECCCEEEEECCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCEECCCCCEEEEEECCE
VKGWGANGNTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGNGEIYGWGW
EEEECCCCCEEEEEECCCCEEEEECCCCEEEEECCEEEECCCCCCCEEEEECCEEEEECC
NFKGSLGRQDLQANWGAPNPVSIKLP
CCCCCCCCCHHHCCCCCCCEEEEECC
>Mature Secondary Structure
MKRKVTFILSIILALSCKPNSRLDLIPFFLLGIGANQTESDQSSFQILFPKEGEIITVYQ
CCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEE
LEATIQTDISGEFEIYDEEQKLFSVPIHSPTSQTFPPFKPKNGENTIQVRFKKPDGTILQ
EEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEE
KEVNFYFGTKLSAGGAHSGFLKNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNI
EEEEEEEECEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEE
FSIHFNQNNSMAITKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDA
EEEEECCCCCEEEEECCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCC
VMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMNPVAVVGLSDVIQVIA
EEEECCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHC
GSEHSAALTKSGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL
CCCCCEEEECCCCEEEEECCCCCCCCCCCEEHHHHHCCCCEEEECCHHHHHHHCCCEEEE
ALASDGRIYSWGLNASGQLGIGGNGSPNPTPNPTQVLNITNASSIWAGGTQSFSILKNGE
EEECCCEEEEECCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCEECCCCCEEEEEECCE
VKGWGANGNTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGNGEIYGWGW
EEEECCCCCEEEEEECCCCEEEEECCCCEEEEECCEEEECCCCCCCEEEEECCEEEEECC
NFKGSLGRQDLQANWGAPNPVSIKLP
CCCCCCCCCHHHCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA