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The map label for this gene is gspC

Identifier: 116328310

GI number: 116328310

Start: 1929519

End: 1930424

Strand: Reverse

Name: gspC

Synonym: LBL_1646

Alternate gene names: NA

Gene position: 1930424-1929519 (Counterclockwise)

Preceding gene: 116328311

Following gene: 116328309

Centisome position: 53.41

GC content: 41.72

Gene sequence:

>906_bases
ATGAACGCGATTTTTTTAGAACTCAGGAAGAACACTTTCTATACTCTTATTCCTGTAATTTTATTCTTTTCTTATTCTCT
TTCCTATCTTCTAAGAGCCGTTATTCTCGCTTTTTTAAATCCAAGTGTTCAAGCGGTGAACTCTAACGTAAGTCCGATTC
GTAAAATGGGTCCGGAAACCATCAATCGAGCCCTTTCTTCCTATGAAGAAATGGTTCAAGGAAATTTAATCCGAGGAGTC
GTCTCCAAAGAAGGAGAAATTCCTGTAGAAGGTGAAATGTCTGTCGCTCCCCCGGATACGGGAGAAGGAGAGGACATGAA
AGTTACCGGTACTTTGAGCGGGCACTGGTCTTTTGCTCGGGTTACGATCGTGGAAAAAGGAAAAGCCGAATCCCAAGAGT
TTGGGATCGGTGAGACTGTCAGCGGATATAAGATTCGTTCCATTGCGCTCAACTACGTAGTTTTGGAAAAGGGAGGAGTT
ACCCTCAAAGTTGAGATCGGTCAAACACCGGGAGAAGCAAGAGCCAAACTAAGTCTAGACGCCAATACAAAAGCGGAAGG
CGAACAACTTCCTACCGGGAATACGATCCGAAAGGTTCTTTCTAGACAAGACGTAAACCGTAAGCTGAAAGACCAAGCAG
CAATCTTTAAAAATGCAAGATTCGGCCCAGCATTGATTAATGGAAAAATCACCGGTTATAAAATCTACAGTGTAACTCCC
GAACATATTTTTTATGCCTTAGGGGCCAGAAATGGAGATATCATCAAACGAGTAAACGGAATGCCATTAACCGAAACTGA
AAAAATGTTAGAAATCTGGGGAGCCGTAAAAACTGCCGATAAGATTACAGTAGATGTAGAAAGAGGTAGTCAGATTCTCA
GCTACGAATTTATTATCAGAAATTAA

Upstream 100 bases:

>100_bases
TTGTTACTCCTTTAGATCCGGGTAGATTTGCCAGATTGTAATCCAAATAGAAATTGGAAGTATCCTAATTTCTTGAAAGA
AATTTACTAATCGAATTCCT

Downstream 100 bases:

>100_bases
AAAAAATGTACGGAACAATCAGTCAATTTTCAATCTTTAGAATATTCCCCATTCTCATACTTTTATTTTTAGTGTGGGAC
AAACCGGTATTTCCTCAGAG

Product: Type II secretory pathway component, protein C

Products: NA

Alternate protein names: Type II Secretory Pathway Component Protein C; PDZ/DHR/GLGF Domain Protein; Type II Secretion System Protein GspC Serine Protease; Type II Secretory Pathway Component PulC-Like Protein; PDZ/DHR/GLGF Domain-Containing Protein

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MNAIFLELRKNTFYTLIPVILFFSYSLSYLLRAVILAFLNPSVQAVNSNVSPIRKMGPETINRALSSYEEMVQGNLIRGV
VSKEGEIPVEGEMSVAPPDTGEGEDMKVTGTLSGHWSFARVTIVEKGKAESQEFGIGETVSGYKIRSIALNYVVLEKGGV
TLKVEIGQTPGEARAKLSLDANTKAEGEQLPTGNTIRKVLSRQDVNRKLKDQAAIFKNARFGPALINGKITGYKIYSVTP
EHIFYALGARNGDIIKRVNGMPLTETEKMLEIWGAVKTADKITVDVERGSQILSYEFIIRN

Sequences:

>Translated_301_residues
MNAIFLELRKNTFYTLIPVILFFSYSLSYLLRAVILAFLNPSVQAVNSNVSPIRKMGPETINRALSSYEEMVQGNLIRGV
VSKEGEIPVEGEMSVAPPDTGEGEDMKVTGTLSGHWSFARVTIVEKGKAESQEFGIGETVSGYKIRSIALNYVVLEKGGV
TLKVEIGQTPGEARAKLSLDANTKAEGEQLPTGNTIRKVLSRQDVNRKLKDQAAIFKNARFGPALINGKITGYKIYSVTP
EHIFYALGARNGDIIKRVNGMPLTETEKMLEIWGAVKTADKITVDVERGSQILSYEFIIRN
>Mature_301_residues
MNAIFLELRKNTFYTLIPVILFFSYSLSYLLRAVILAFLNPSVQAVNSNVSPIRKMGPETINRALSSYEEMVQGNLIRGV
VSKEGEIPVEGEMSVAPPDTGEGEDMKVTGTLSGHWSFARVTIVEKGKAESQEFGIGETVSGYKIRSIALNYVVLEKGGV
TLKVEIGQTPGEARAKLSLDANTKAEGEQLPTGNTIRKVLSRQDVNRKLKDQAAIFKNARFGPALINGKITGYKIYSVTP
EHIFYALGARNGDIIKRVNGMPLTETEKMLEIWGAVKTADKITVDVERGSQILSYEFIIRN

Specific function: Unknown

COG id: COG3031

COG function: function code U; Type II secretory pathway, component PulC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33135; Mature: 33135

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAIFLELRKNTFYTLIPVILFFSYSLSYLLRAVILAFLNPSVQAVNSNVSPIRKMGPET
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHCCHHH
INRALSSYEEMVQGNLIRGVVSKEGEIPVEGEMSVAPPDTGEGEDMKVTGTLSGHWSFAR
HHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCEEEEE
VTIVEKGKAESQEFGIGETVSGYKIRSIALNYVVLEKGGVTLKVEIGQTPGEARAKLSLD
EEEEECCCCCCHHCCCCCCCCCEEEEEEEEEEEEEECCCEEEEEEECCCCCCCEEEEEEC
ANTKAEGEQLPTGNTIRKVLSRQDVNRKLKDQAAIFKNARFGPALINGKITGYKIYSVTP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEEEEEECH
EHIFYALGARNGDIIKRVNGMPLTETEKMLEIWGAVKTADKITVDVERGSQILSYEFIIR
HHEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEEE
N
C
>Mature Secondary Structure
MNAIFLELRKNTFYTLIPVILFFSYSLSYLLRAVILAFLNPSVQAVNSNVSPIRKMGPET
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHCCHHH
INRALSSYEEMVQGNLIRGVVSKEGEIPVEGEMSVAPPDTGEGEDMKVTGTLSGHWSFAR
HHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCEEEEE
VTIVEKGKAESQEFGIGETVSGYKIRSIALNYVVLEKGGVTLKVEIGQTPGEARAKLSLD
EEEEECCCCCCHHCCCCCCCCCEEEEEEEEEEEEEECCCEEEEEEECCCCCCCEEEEEEC
ANTKAEGEQLPTGNTIRKVLSRQDVNRKLKDQAAIFKNARFGPALINGKITGYKIYSVTP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEEEEEECH
EHIFYALGARNGDIIKRVNGMPLTETEKMLEIWGAVKTADKITVDVERGSQILSYEFIIR
HHEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEEE
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA