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The map label for this gene is 116328285

Identifier: 116328285

GI number: 116328285

Start: 1899000

End: 1899497

Strand: Direct

Name: 116328285

Synonym: LBL_1620

Alternate gene names: NA

Gene position: 1899000-1899497 (Clockwise)

Preceding gene: 116328281

Following gene: 116328286

Centisome position: 52.54

GC content: 37.35

Gene sequence:

>498_bases
ATGTCTTCTCAAGTGGTGATTGACGGTTTCAATCTGATCTATAAATTCCCCGATTTGGAAGAATATATGGTTCGAAACAG
GCTTTTAGAAGCCAGACAAGGACTTTTAGAACGAATCGAGTCATATTCCCAAAAAAAGAAGGAACAAATTTTTCACGTTT
TTTTCGACGGAAAAAAAGAAGTCGGTAGCGCAATCTTTCAGGAAACTTTCGGAAAACTAAATGTGTATTTTAGCCATGGT
AGAAAGGCGGACGATGTGATTAAGGAATTTGTTCGAACAAATGCTCGCCCTTCTGAAATCGAAGTGGTCAGTTCGGATAA
AGAGATTTTTTTTCATGCAAAAAAATGGGGTGCCAATCCAATCACTTCCGAAGATTTTGCCACAATTGTTATCGCGAAAA
TTTTTCCTTCCAAACCCGATCCCGAAAAATTCGAAGATAGGATATTGAATTCCGAAGAAGTGGAATATTGGAAAAACTTA
TTTAGGGAAGACGAATAA

Upstream 100 bases:

>100_bases
GGACCGGAAAATGTTCGGAATCAGCCATTTTACTCATAACCTCCTTGGAAAGGTTGGTTTACAGTATTTACGAGAATAGA
ATTCTGGTCACTACAATTCC

Downstream 100 bases:

>100_bases
CAGTGTTGTTCAATTCGGTGACTTTTGCGATTTTTTTTGCGATCGTTTATGTGATCTACTGGTCGGTTCCCCAAAAAAAC
CGTCCTAATCTTTTGATTTT

Product: RNA-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSSQVVIDGFNLIYKFPDLEEYMVRNRLLEARQGLLERIESYSQKKKEQIFHVFFDGKKEVGSAIFQETFGKLNVYFSHG
RKADDVIKEFVRTNARPSEIEVVSSDKEIFFHAKKWGANPITSEDFATIVIAKIFPSKPDPEKFEDRILNSEEVEYWKNL
FREDE

Sequences:

>Translated_165_residues
MSSQVVIDGFNLIYKFPDLEEYMVRNRLLEARQGLLERIESYSQKKKEQIFHVFFDGKKEVGSAIFQETFGKLNVYFSHG
RKADDVIKEFVRTNARPSEIEVVSSDKEIFFHAKKWGANPITSEDFATIVIAKIFPSKPDPEKFEDRILNSEEVEYWKNL
FREDE
>Mature_164_residues
SSQVVIDGFNLIYKFPDLEEYMVRNRLLEARQGLLERIESYSQKKKEQIFHVFFDGKKEVGSAIFQETFGKLNVYFSHGR
KADDVIKEFVRTNARPSEIEVVSSDKEIFFHAKKWGANPITSEDFATIVIAKIFPSKPDPEKFEDRILNSEEVEYWKNLF
REDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19396; Mature: 19265

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQVVIDGFNLIYKFPDLEEYMVRNRLLEARQGLLERIESYSQKKKEQIFHVFFDGKKE
CCCCEEEECHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VGSAIFQETFGKLNVYFSHGRKADDVIKEFVRTNARPSEIEVVSSDKEIFFHAKKWGANP
HHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEHHHCCCCC
ITSEDFATIVIAKIFPSKPDPEKFEDRILNSEEVEYWKNLFREDE
CCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSQVVIDGFNLIYKFPDLEEYMVRNRLLEARQGLLERIESYSQKKKEQIFHVFFDGKKE
CCCEEEECHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VGSAIFQETFGKLNVYFSHGRKADDVIKEFVRTNARPSEIEVVSSDKEIFFHAKKWGANP
HHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEHHHCCCCC
ITSEDFATIVIAKIFPSKPDPEKFEDRILNSEEVEYWKNLFREDE
CCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA