| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
Click here to switch to the map view.
The map label for this gene is 116328284
Identifier: 116328284
GI number: 116328284
Start: 1898034
End: 1898927
Strand: Reverse
Name: 116328284
Synonym: LBL_1619
Alternate gene names: NA
Gene position: 1898927-1898034 (Counterclockwise)
Preceding gene: 116328288
Following gene: 116328283
Centisome position: 52.54
GC content: 36.91
Gene sequence:
>894_bases ATGGCTGATTCCGAACATTTTCCGGTCCGGGTCAACAAATTTAACATTTGGCATTTCTATCTTTGGTTTCGAGCGTTGCC GGGTTCGGGAAGAGATTTATTCCTTCTACCTATCGCGGCTTTGGATGTTTTTCTACTTTTGACCTATAATTCGTATAATG AAATTCTTCCCAAAGAATTGTATATCTATGTGATCGGATTTGATTTTTTTGTCTTAGTAGTTTGGGTAATGGAGCTCATC TCTAAGTTCAGAAAATCTAAAGAGCCAGGAACATTTTTCTCGATGAATTGGTATGAAATTGTAGGAGTGATTCCGTTTTA TTTTCTTCGTCCTTTTCTACTTTTGAGAGGAATGAAAATTCTAATCGCATTTTATAAGTTAGGTCAGTCCGGGCAAAACC TAAGCGACATTGTTACGAGGGAAATTACATTCCGATTTAGAGATGTGATCGTGGACACGATCGCAGACGCCGTATTTCTG CATTCTTTAGAAAGAGTGAAAGAGGTGATGATTCGTCTGGATTATAGCCAACTGGCTAAAACGGCTTTTGAACTTCATCA AGACCAATTTAATATAAAAGTGAACGAAGCACTTAAATCTAAGTTTTTGTTAGGCGAACTCTCTAAAATTCCCTTTATGG GAGAAATTTCCAAACGACTTGGAGAAGATATCAGTTCGATGATTACCGAAATTTTGGAAAACCAAATTACCGGAGAAATC ATGAAGCAGATTACAGAAGCTATTTTGAAAGAAATGGCAAATCACGTAAAAAAATTACCGATCGAAAGAATCACAAGGCC ATTGGAATCTACTTCGACCGAAGTCGAGTCACAATTAAAGAATGAATTCAAAGAAGAAGAGACCCTTTCTGAAGAAAGAC CTTTTCAGAATTAA
Upstream 100 bases:
>100_bases AACCGTCAATCACCACTTGAGAAGACATGGAATTGTAGTGACCAGAATTCTATTCTCGTAAATACTGTAAACCAACCTTT CCAAGGAGGTTATGAGTAAA
Downstream 100 bases:
>100_bases TTTTAAAGCATAGTCGAAAAGTTTGATTTTCAGATACAATTCAATTCGACTTATTTGAAGTAGACTCAAAATGGTTTTGA ACGAATCCAAGTAAAACATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MADSEHFPVRVNKFNIWHFYLWFRALPGSGRDLFLLPIAALDVFLLLTYNSYNEILPKELYIYVIGFDFFVLVVWVMELI SKFRKSKEPGTFFSMNWYEIVGVIPFYFLRPFLLLRGMKILIAFYKLGQSGQNLSDIVTREITFRFRDVIVDTIADAVFL HSLERVKEVMIRLDYSQLAKTAFELHQDQFNIKVNEALKSKFLLGELSKIPFMGEISKRLGEDISSMITEILENQITGEI MKQITEAILKEMANHVKKLPIERITRPLESTSTEVESQLKNEFKEEETLSEERPFQN
Sequences:
>Translated_297_residues MADSEHFPVRVNKFNIWHFYLWFRALPGSGRDLFLLPIAALDVFLLLTYNSYNEILPKELYIYVIGFDFFVLVVWVMELI SKFRKSKEPGTFFSMNWYEIVGVIPFYFLRPFLLLRGMKILIAFYKLGQSGQNLSDIVTREITFRFRDVIVDTIADAVFL HSLERVKEVMIRLDYSQLAKTAFELHQDQFNIKVNEALKSKFLLGELSKIPFMGEISKRLGEDISSMITEILENQITGEI MKQITEAILKEMANHVKKLPIERITRPLESTSTEVESQLKNEFKEEETLSEERPFQN >Mature_296_residues ADSEHFPVRVNKFNIWHFYLWFRALPGSGRDLFLLPIAALDVFLLLTYNSYNEILPKELYIYVIGFDFFVLVVWVMELIS KFRKSKEPGTFFSMNWYEIVGVIPFYFLRPFLLLRGMKILIAFYKLGQSGQNLSDIVTREITFRFRDVIVDTIADAVFLH SLERVKEVMIRLDYSQLAKTAFELHQDQFNIKVNEALKSKFLLGELSKIPFMGEISKRLGEDISSMITEILENQITGEIM KQITEAILKEMANHVKKLPIERITRPLESTSTEVESQLKNEFKEEETLSEERPFQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34804; Mature: 34673
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSEHFPVRVNKFNIWHFYLWFRALPGSGRDLFLLPIAALDVFLLLTYNSYNEILPKEL CCCCCCCCEEEEEEEHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCHHHCCCHHH YIYVIGFDFFVLVVWVMELISKFRKSKEPGTFFSMNWYEIVGVIPFYFLRPFLLLRGMKI EEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHH LIAFYKLGQSGQNLSDIVTREITFRFRDVIVDTIADAVFLHSLERVKEVMIRLDYSQLAK HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH TAFELHQDQFNIKVNEALKSKFLLGELSKIPFMGEISKRLGEDISSMITEILENQITGEI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKQITEAILKEMANHVKKLPIERITRPLESTSTEVESQLKNEFKEEETLSEERPFQN HHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ADSEHFPVRVNKFNIWHFYLWFRALPGSGRDLFLLPIAALDVFLLLTYNSYNEILPKEL CCCCCCCEEEEEEEHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCHHHCCCHHH YIYVIGFDFFVLVVWVMELISKFRKSKEPGTFFSMNWYEIVGVIPFYFLRPFLLLRGMKI EEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHH LIAFYKLGQSGQNLSDIVTREITFRFRDVIVDTIADAVFLHSLERVKEVMIRLDYSQLAK HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH TAFELHQDQFNIKVNEALKSKFLLGELSKIPFMGEISKRLGEDISSMITEILENQITGEI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKQITEAILKEMANHVKKLPIERITRPLESTSTEVESQLKNEFKEEETLSEERPFQN HHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA