| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
Click here to switch to the map view.
The map label for this gene is 116328030
Identifier: 116328030
GI number: 116328030
Start: 1557350
End: 1558648
Strand: Direct
Name: 116328030
Synonym: LBL_1325
Alternate gene names: NA
Gene position: 1557350-1558648 (Clockwise)
Preceding gene: 116328029
Following gene: 116328032
Centisome position: 43.09
GC content: 38.11
Gene sequence:
>1299_bases ATGAAAAAAGAACAAGAAACTTTGAAAGCAAAGTTTTCAAAATTATATTTATCAAGAATGACTCGAGTAGGGAGTAGGTT TTTTCTACTCGTTTTTGTTTTTTCGACGATGTTGTTTTGTATTCCCGGAAAAAAGACTTCGAACAGTAAGGTCATGCTTC TGGCATGGTTAGTCGGGGAGATGAATTCGTATAAAGAGGGTCAAGTATATCAAAACGCTAAACATTTAACCGGACCTCTG GGGCAAGTCGAGTACCGAGGTTTGGATTTTTTTGATAATTCTGCCTTCAACGGGATCGGAAGGCATAATTGGCAGGAGGC CGGGGATGCAACTTTTAATGTTGGGGTAACCCTAGGCGCGATGGCTTGGAGGTATAAAAATACTCATGATCCGGATACGC TCTCTCTTATAAAGAGATATGTAAATTATTATAAACTAATGCAATCTCTGAATAACGGAGGATTCGGTCGAAATTTCGTC AATATAGAGGCGTATGACCAATTTTTATCTTGTAACAAAAATGGAACGGAAGGCGCTCGTCCTGACAATGCGTCTTGTGG GACCATGAGATATGCCGATTATGTGTTCGAAGATCAACACTATAAATTTAGATACGATTTTTCTCTGGACGCGGTGATCC ATTCTCTCGTCGGGCTTTACTGGACTTATGTATTTGTCGATGAATTGAAACCGGATATTGTCCAAATTTGTGAAGGTCTT TTGCGATATTATACTGCTAATAATTATCAGGTAAAAGATTCCAATGATAGGCTTCTTCGATATGGTAATCATAACCCTGC AGTCAATCCAGTGGCTAAAATCAACGAAGTGATCTTGAAATACATTGCCCAGGGACAGATGACGGATTTGGGGGTTTGGA GAGAAATTATAACTCTTGGCTCCTCCGTCATAGGAATAGTGGTTCAGTCCGAAGATGCTAATTTTTTCAACCACTACATG CTTCTCAAAGGAATTGGTGTTTTAGTCCATATGGGATATCCGTTGCAAAATGGGTTAAAAAATTTAATCAATGCCGTAAA TGATCAAGGTCATGAACTCGCGGATTCCATGGATATTTATTTTTTTCAGACTTCTAAAATACACGTAAAAGATAAAGGTG GATTTCCTCTTTACAATTATCATTGTTTAGTAGATCAAACTTTTTCAGATATATTAGGACTTTTTGATAGAAAGCCTTAC AATAAGTGGGAGTTTTCTCCTTATAGAAGATGTGTCGTGAGACAACCTTCCGCTTTAGGATTGAATTCGGATTTCTTAGA AGCTTATTGGTTGTGGTAA
Upstream 100 bases:
>100_bases TTTAGAAAACCGCACCTTGCGAGTATTTGTGTTTTGTAAAATAGAAGCGAAGTTAGATGGCTTAGACTGAAAATGAATTA AGCAAGGGCATGGTGTTAGG
Downstream 100 bases:
>100_bases TCGTCAGAAAAACAATCGAGAGAGAGTTTAGTTGAAAACTTTGCGTTGAAACTTCGCTCAATTCATCATAACTTCGTTAT GATGAATTGAATTGTTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MKKEQETLKAKFSKLYLSRMTRVGSRFFLLVFVFSTMLFCIPGKKTSNSKVMLLAWLVGEMNSYKEGQVYQNAKHLTGPL GQVEYRGLDFFDNSAFNGIGRHNWQEAGDATFNVGVTLGAMAWRYKNTHDPDTLSLIKRYVNYYKLMQSLNNGGFGRNFV NIEAYDQFLSCNKNGTEGARPDNASCGTMRYADYVFEDQHYKFRYDFSLDAVIHSLVGLYWTYVFVDELKPDIVQICEGL LRYYTANNYQVKDSNDRLLRYGNHNPAVNPVAKINEVILKYIAQGQMTDLGVWREIITLGSSVIGIVVQSEDANFFNHYM LLKGIGVLVHMGYPLQNGLKNLINAVNDQGHELADSMDIYFFQTSKIHVKDKGGFPLYNYHCLVDQTFSDILGLFDRKPY NKWEFSPYRRCVVRQPSALGLNSDFLEAYWLW
Sequences:
>Translated_432_residues MKKEQETLKAKFSKLYLSRMTRVGSRFFLLVFVFSTMLFCIPGKKTSNSKVMLLAWLVGEMNSYKEGQVYQNAKHLTGPL GQVEYRGLDFFDNSAFNGIGRHNWQEAGDATFNVGVTLGAMAWRYKNTHDPDTLSLIKRYVNYYKLMQSLNNGGFGRNFV NIEAYDQFLSCNKNGTEGARPDNASCGTMRYADYVFEDQHYKFRYDFSLDAVIHSLVGLYWTYVFVDELKPDIVQICEGL LRYYTANNYQVKDSNDRLLRYGNHNPAVNPVAKINEVILKYIAQGQMTDLGVWREIITLGSSVIGIVVQSEDANFFNHYM LLKGIGVLVHMGYPLQNGLKNLINAVNDQGHELADSMDIYFFQTSKIHVKDKGGFPLYNYHCLVDQTFSDILGLFDRKPY NKWEFSPYRRCVVRQPSALGLNSDFLEAYWLW >Mature_432_residues MKKEQETLKAKFSKLYLSRMTRVGSRFFLLVFVFSTMLFCIPGKKTSNSKVMLLAWLVGEMNSYKEGQVYQNAKHLTGPL GQVEYRGLDFFDNSAFNGIGRHNWQEAGDATFNVGVTLGAMAWRYKNTHDPDTLSLIKRYVNYYKLMQSLNNGGFGRNFV NIEAYDQFLSCNKNGTEGARPDNASCGTMRYADYVFEDQHYKFRYDFSLDAVIHSLVGLYWTYVFVDELKPDIVQICEGL LRYYTANNYQVKDSNDRLLRYGNHNPAVNPVAKINEVILKYIAQGQMTDLGVWREIITLGSSVIGIVVQSEDANFFNHYM LLKGIGVLVHMGYPLQNGLKNLINAVNDQGHELADSMDIYFFQTSKIHVKDKGGFPLYNYHCLVDQTFSDILGLFDRKPY NKWEFSPYRRCVVRQPSALGLNSDFLEAYWLW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49714; Mature: 49714
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKEQETLKAKFSKLYLSRMTRVGSRFFLLVFVFSTMLFCIPGKKTSNSKVMLLAWLVGE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEEHHHH MNSYKEGQVYQNAKHLTGPLGQVEYRGLDFFDNSAFNGIGRHNWQEAGDATFNVGVTLGA HCCCCCCHHHHCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCEEEECEEEHH MAWRYKNTHDPDTLSLIKRYVNYYKLMQSLNNGGFGRNFVNIEAYDQFLSCNKNGTEGAR HHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCCCCCCC PDNASCGTMRYADYVFEDQHYKFRYDFSLDAVIHSLVGLYWTYVFVDELKPDIVQICEGL CCCCCCCCEEHHHHHEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LRYYTANNYQVKDSNDRLLRYGNHNPAVNPVAKINEVILKYIAQGQMTDLGVWREIITLG HHHHCCCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC SSVIGIVVQSEDANFFNHYMLLKGIGVLVHMGYPLQNGLKNLINAVNDQGHELADSMDIY CCEEEEEEECCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCHHHHCCCEEE FFQTSKIHVKDKGGFPLYNYHCLVDQTFSDILGLFDRKPYNKWEFSPYRRCVVRQPSALG EEEEEEEEEECCCCCCEEEEEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCC LNSDFLEAYWLW CCCHHHHHEECC >Mature Secondary Structure MKKEQETLKAKFSKLYLSRMTRVGSRFFLLVFVFSTMLFCIPGKKTSNSKVMLLAWLVGE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEEHHHH MNSYKEGQVYQNAKHLTGPLGQVEYRGLDFFDNSAFNGIGRHNWQEAGDATFNVGVTLGA HCCCCCCHHHHCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCEEEECEEEHH MAWRYKNTHDPDTLSLIKRYVNYYKLMQSLNNGGFGRNFVNIEAYDQFLSCNKNGTEGAR HHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCCCCCCC PDNASCGTMRYADYVFEDQHYKFRYDFSLDAVIHSLVGLYWTYVFVDELKPDIVQICEGL CCCCCCCCEEHHHHHEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LRYYTANNYQVKDSNDRLLRYGNHNPAVNPVAKINEVILKYIAQGQMTDLGVWREIITLG HHHHCCCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC SSVIGIVVQSEDANFFNHYMLLKGIGVLVHMGYPLQNGLKNLINAVNDQGHELADSMDIY CCEEEEEEECCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCHHHHCCCEEE FFQTSKIHVKDKGGFPLYNYHCLVDQTFSDILGLFDRKPYNKWEFSPYRRCVVRQPSALG EEEEEEEEEECCCCCCEEEEEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCC LNSDFLEAYWLW CCCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA