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The map label for this gene is yqfF [H]

Identifier: 116327963

GI number: 116327963

Start: 1473442

End: 1475862

Strand: Direct

Name: yqfF [H]

Synonym: LBL_1252

Alternate gene names: 116327963

Gene position: 1473442-1475862 (Clockwise)

Preceding gene: 116327962

Following gene: 116327964

Centisome position: 40.77

GC content: 42.42

Gene sequence:

>2421_bases
ATGCCCAGCCCGGGAGAACAAGTAGAGTCTGCTATGGCTTGGATTACGGACACTCTTACGAGGGTTCGCCCGATTCTATT
TGTTCGAAGATTTCAAGTCGCTTTGGTGGTTATTACTCTTTTGATGGTAACCTGGATGCTCGCCATTCCGTTTTTCGGTC
AGGATAAAATGGATCTTTCTCCGGATGGATTGTATTCGGAAGGGAAAACGGCGCCGGAAAAAATCATTTCCGTCAAAGAA
ATCGTATATGAAGACGAGGATAAGACCAAGGCTAAAAAACTAACCGCATATCAGTCCGCTCCTTTTGTTTTTGACCGCGA
TTACGAGATCTTACAAGATCAAATCAACAACGCCATTCAGGAAGATATGGAGAACTTTCGTTCCTTCAAACCGAGTGCGG
AAGAAAAGGCGTATGCCGAACTTTTGAGCGCCGTTCCTCGATGGAGGAATAGGTCGAAGGAAGAAATCGAACTTTTATAC
AAGACTCCCGGCAAGGGAAAACTTAAGGATCTAATTCAACAATATTCTAATTTAGTATTTTCTTCTTTTTGCATATTGCG
CGATTTGCCGCCGGATTACGCCGCCTTAAAAAATTCTGGCGGCCGGGTTCGAAATCAGGGAATTAAAGAGCAGATTTCTA
ATTTGGAAGGGGCCTACATTATACCAAGATCTTTTTTATATAGGGATCCTAATACCGTAAATATTCTCAATCGGATGGCG
GAGGAAAAACTTTCCCGTATGGATGCGGCGGTGCTTCCGATCGTCCAAAAAATTTCCCTAAGTTATATCTATTCCAATCC
TTCTTGTTCATATAATTCGGAAGAAACTCTATCAGCCAAACAATTTGCGGCCGACCGGGCCGAACCGGTCAATTCTAGGA
TTCTTGCGGGAGAAGTGATCGTTAAGTCCGGAGAGATCATAACTCCTGAAATATTCAAAAAATTGCAAATTGTGAACACC
TACGCAACGCGGGCGAACATCGCTTCTATCGTTTCTATTTTACTTATTCAGACCGTTTTTGTGGTGATCATTTATATTTT
TCTTAAAAAATACAATCCTAAACGATTGAACGACGTTTCGAGTAACGTAATCGTATTTTCCCTCATCTGGTTTTTAGTTT
TAAGCTGCACGGTTGCTTCTAAGATTTATTTCAATTTCGAAACCAAATACGATTCCATCTTTTATTTCGCTTTGTTCGTT
CCGGTGGGAGTCGTCTGTTTGATCGTCAGTTTTATCTACGATGAACAACTTTCCATCGCGATCGGATTTTATCTTTCGTT
TTTCGTCTTTATGGCCTCGCACTATAATCCGACTTCGTTTATGCTGGGATTCGTCTCTTGTATCGTTTCTGCGAGTTATG
GAAGAAATCTAAAAAAACGAATCGACTTTATCAAAGCGGGTTTGTATATAGCCGGAGTTCAGATCGTCATCGCTTCCAGC
GGTTATTTGTTCGATTCTCGTAACTATTGGGTGGCAATTCCGAGCGGATCTTGGATCAAGGATTTGGTCGAGTCGAATAT
ATTCAAATTATATGTTCTTTGTCTGATCAACGGATTCGCTTGTTCCACCGCGGCGCAGTTTCTGCTTCCGATTTATGAAT
ATCTATTCAACGTTCCGACTCGTTTTAAACTGATGGAGCTTGCGGACACCGGTCATCCTCTACTGCAGGACCTTTTGACT
AAAGCGCCTTCCACATACACACATACGTTTTTAGTTGCGGCTCTTTCAGAACGCGCCTGTCAAAATCTGGGTTTGGATTG
GCTTTTGACTAGAGTAGGGGTATATTTCCACGATATCGGTAAGATCCCGAATGCCGGGTTCTTTGTGGAAAATCAACATT
TGATTCCGAAAAAAGAGAATATCGACAAAAACAATCCGGCACTTGCGGCCAAGATCGTCATTGATCACGTGTTAGACGGA
ATTGAAATGGCAAAGAAGGCCAGACTTCCGAGAGAGGTCATCGACTTCATTCCCGAACATCATGGAACTTCGACGATGGC
GTTCTTTTATCACAAGGCATTGTCCGAGCTTTCTCCGACTCAGAAAAAGAAACTGAAAAAACAAGACTTTCAGTATCCCG
GTCCTAAACCTCAGAGAAAAGAAACTGCTATTGTAATGATTGCGGATTCTCTTGAAGCGGCGTCTCGTTCGTTGGAGGAA
ATTACTCCCGAGTCTTTGGACAACCTCATCACCAAAATTATCGGGATCAAGCTCGCCGAAAATCAATTGGACGAATGCGG
ACTTACATTAGGCGATCTGGAAGTAATCAAAGCTTCGTTTAAGGAAGTATTATTGTCCAGTCTTCATTCCAGACCGAAAT
ATCCGAGTATGGAAGCCACCAAAGCATTGGAAAAAAAGAATGCGTTAAATTCCATGAACGGATACAAGCAGACCAAGACC
TCTTCGGGGAAAATAAACTGA

Upstream 100 bases:

>100_bases
AACACGGATCAAATTGGAATGGTGTTTTTCGGAAAAGAGGATATCACCAGACATCCGCTTGTGGAAGTGATCGTTCGTAA
GTTCGAGGAGCTATAATCGT

Downstream 100 bases:

>100_bases
TTGCAGATTTAGTCTCCATTTCCAACGACTACGGGGACATTTCCTGGTGGAACGAAACGGAGGTGATTTTCAATTGTGGG
ATTCTTTTCCGTAAGGAACT

Product: HD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 806; Mature: 805

Protein sequence:

>806_residues
MPSPGEQVESAMAWITDTLTRVRPILFVRRFQVALVVITLLMVTWMLAIPFFGQDKMDLSPDGLYSEGKTAPEKIISVKE
IVYEDEDKTKAKKLTAYQSAPFVFDRDYEILQDQINNAIQEDMENFRSFKPSAEEKAYAELLSAVPRWRNRSKEEIELLY
KTPGKGKLKDLIQQYSNLVFSSFCILRDLPPDYAALKNSGGRVRNQGIKEQISNLEGAYIIPRSFLYRDPNTVNILNRMA
EEKLSRMDAAVLPIVQKISLSYIYSNPSCSYNSEETLSAKQFAADRAEPVNSRILAGEVIVKSGEIITPEIFKKLQIVNT
YATRANIASIVSILLIQTVFVVIIYIFLKKYNPKRLNDVSSNVIVFSLIWFLVLSCTVASKIYFNFETKYDSIFYFALFV
PVGVVCLIVSFIYDEQLSIAIGFYLSFFVFMASHYNPTSFMLGFVSCIVSASYGRNLKKRIDFIKAGLYIAGVQIVIASS
GYLFDSRNYWVAIPSGSWIKDLVESNIFKLYVLCLINGFACSTAAQFLLPIYEYLFNVPTRFKLMELADTGHPLLQDLLT
KAPSTYTHTFLVAALSERACQNLGLDWLLTRVGVYFHDIGKIPNAGFFVENQHLIPKKENIDKNNPALAAKIVIDHVLDG
IEMAKKARLPREVIDFIPEHHGTSTMAFFYHKALSELSPTQKKKLKKQDFQYPGPKPQRKETAIVMIADSLEAASRSLEE
ITPESLDNLITKIIGIKLAENQLDECGLTLGDLEVIKASFKEVLLSSLHSRPKYPSMEATKALEKKNALNSMNGYKQTKT
SSGKIN

Sequences:

>Translated_806_residues
MPSPGEQVESAMAWITDTLTRVRPILFVRRFQVALVVITLLMVTWMLAIPFFGQDKMDLSPDGLYSEGKTAPEKIISVKE
IVYEDEDKTKAKKLTAYQSAPFVFDRDYEILQDQINNAIQEDMENFRSFKPSAEEKAYAELLSAVPRWRNRSKEEIELLY
KTPGKGKLKDLIQQYSNLVFSSFCILRDLPPDYAALKNSGGRVRNQGIKEQISNLEGAYIIPRSFLYRDPNTVNILNRMA
EEKLSRMDAAVLPIVQKISLSYIYSNPSCSYNSEETLSAKQFAADRAEPVNSRILAGEVIVKSGEIITPEIFKKLQIVNT
YATRANIASIVSILLIQTVFVVIIYIFLKKYNPKRLNDVSSNVIVFSLIWFLVLSCTVASKIYFNFETKYDSIFYFALFV
PVGVVCLIVSFIYDEQLSIAIGFYLSFFVFMASHYNPTSFMLGFVSCIVSASYGRNLKKRIDFIKAGLYIAGVQIVIASS
GYLFDSRNYWVAIPSGSWIKDLVESNIFKLYVLCLINGFACSTAAQFLLPIYEYLFNVPTRFKLMELADTGHPLLQDLLT
KAPSTYTHTFLVAALSERACQNLGLDWLLTRVGVYFHDIGKIPNAGFFVENQHLIPKKENIDKNNPALAAKIVIDHVLDG
IEMAKKARLPREVIDFIPEHHGTSTMAFFYHKALSELSPTQKKKLKKQDFQYPGPKPQRKETAIVMIADSLEAASRSLEE
ITPESLDNLITKIIGIKLAENQLDECGLTLGDLEVIKASFKEVLLSSLHSRPKYPSMEATKALEKKNALNSMNGYKQTKT
SSGKIN
>Mature_805_residues
PSPGEQVESAMAWITDTLTRVRPILFVRRFQVALVVITLLMVTWMLAIPFFGQDKMDLSPDGLYSEGKTAPEKIISVKEI
VYEDEDKTKAKKLTAYQSAPFVFDRDYEILQDQINNAIQEDMENFRSFKPSAEEKAYAELLSAVPRWRNRSKEEIELLYK
TPGKGKLKDLIQQYSNLVFSSFCILRDLPPDYAALKNSGGRVRNQGIKEQISNLEGAYIIPRSFLYRDPNTVNILNRMAE
EKLSRMDAAVLPIVQKISLSYIYSNPSCSYNSEETLSAKQFAADRAEPVNSRILAGEVIVKSGEIITPEIFKKLQIVNTY
ATRANIASIVSILLIQTVFVVIIYIFLKKYNPKRLNDVSSNVIVFSLIWFLVLSCTVASKIYFNFETKYDSIFYFALFVP
VGVVCLIVSFIYDEQLSIAIGFYLSFFVFMASHYNPTSFMLGFVSCIVSASYGRNLKKRIDFIKAGLYIAGVQIVIASSG
YLFDSRNYWVAIPSGSWIKDLVESNIFKLYVLCLINGFACSTAAQFLLPIYEYLFNVPTRFKLMELADTGHPLLQDLLTK
APSTYTHTFLVAALSERACQNLGLDWLLTRVGVYFHDIGKIPNAGFFVENQHLIPKKENIDKNNPALAAKIVIDHVLDGI
EMAKKARLPREVIDFIPEHHGTSTMAFFYHKALSELSPTQKKKLKKQDFQYPGPKPQRKETAIVMIADSLEAASRSLEEI
TPESLDNLITKIIGIKLAENQLDECGLTLGDLEVIKASFKEVLLSSLHSRPKYPSMEATKALEKKNALNSMNGYKQTKTS
SGKIN

Specific function: Unknown

COG id: COG1480

COG function: function code R; Predicted membrane-associated HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011624
- InterPro:   IPR011621
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]

EC number: NA

Molecular weight: Translated: 91013; Mature: 90881

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSPGEQVESAMAWITDTLTRVRPILFVRRFQVALVVITLLMVTWMLAIPFFGQDKMDLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDGLYSEGKTAPEKIISVKEIVYEDEDKTKAKKLTAYQSAPFVFDRDYEILQDQINNAIQ
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHH
EDMENFRSFKPSAEEKAYAELLSAVPRWRNRSKEEIELLYKTPGKGKLKDLIQQYSNLVF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCCCHHHHHHHHHHHHHH
SSFCILRDLPPDYAALKNSGGRVRNQGIKEQISNLEGAYIIPRSFLYRDPNTVNILNRMA
HHHHHHHCCCCCHHHHHCCCCCHHHCCHHHHHHCCCCCEECCHHHHCCCCCHHHHHHHHH
EEKLSRMDAAVLPIVQKISLSYIYSNPSCSYNSEETLSAKQFAADRAEPVNSRILAGEVI
HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECHHE
VKSGEIITPEIFKKLQIVNTYATRANIASIVSILLIQTVFVVIIYIFLKKYNPKRLNDVS
ECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SNVIVFSLIWFLVLSCTVASKIYFNFETKYDSIFYFALFVPVGVVCLIVSFIYDEQLSIA
CHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
IGFYLSFFVFMASHYNPTSFMLGFVSCIVSASYGRNLKKRIDFIKAGLYIAGVQIVIASS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEEEECC
GYLFDSRNYWVAIPSGSWIKDLVESNIFKLYVLCLINGFACSTAAQFLLPIYEYLFNVPT
CCEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
RFKLMELADTGHPLLQDLLTKAPSTYTHTFLVAALSERACQNLGLDWLLTRVGVYFHDIG
HHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
KIPNAGFFVENQHLIPKKENIDKNNPALAAKIVIDHVLDGIEMAKKARLPREVIDFIPEH
CCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC
HGTSTMAFFYHKALSELSPTQKKKLKKQDFQYPGPKPQRKETAIVMIADSLEAASRSLEE
CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHH
ITPESLDNLITKIIGIKLAENQLDECGLTLGDLEVIKASFKEVLLSSLHSRPKYPSMEAT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
KALEKKNALNSMNGYKQTKTSSGKIN
HHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PSPGEQVESAMAWITDTLTRVRPILFVRRFQVALVVITLLMVTWMLAIPFFGQDKMDLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDGLYSEGKTAPEKIISVKEIVYEDEDKTKAKKLTAYQSAPFVFDRDYEILQDQINNAIQ
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHH
EDMENFRSFKPSAEEKAYAELLSAVPRWRNRSKEEIELLYKTPGKGKLKDLIQQYSNLVF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCCCHHHHHHHHHHHHHH
SSFCILRDLPPDYAALKNSGGRVRNQGIKEQISNLEGAYIIPRSFLYRDPNTVNILNRMA
HHHHHHHCCCCCHHHHHCCCCCHHHCCHHHHHHCCCCCEECCHHHHCCCCCHHHHHHHHH
EEKLSRMDAAVLPIVQKISLSYIYSNPSCSYNSEETLSAKQFAADRAEPVNSRILAGEVI
HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECHHE
VKSGEIITPEIFKKLQIVNTYATRANIASIVSILLIQTVFVVIIYIFLKKYNPKRLNDVS
ECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SNVIVFSLIWFLVLSCTVASKIYFNFETKYDSIFYFALFVPVGVVCLIVSFIYDEQLSIA
CHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
IGFYLSFFVFMASHYNPTSFMLGFVSCIVSASYGRNLKKRIDFIKAGLYIAGVQIVIASS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEEEECC
GYLFDSRNYWVAIPSGSWIKDLVESNIFKLYVLCLINGFACSTAAQFLLPIYEYLFNVPT
CCEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
RFKLMELADTGHPLLQDLLTKAPSTYTHTFLVAALSERACQNLGLDWLLTRVGVYFHDIG
HHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
KIPNAGFFVENQHLIPKKENIDKNNPALAAKIVIDHVLDGIEMAKKARLPREVIDFIPEH
CCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC
HGTSTMAFFYHKALSELSPTQKKKLKKQDFQYPGPKPQRKETAIVMIADSLEAASRSLEE
CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHH
ITPESLDNLITKIIGIKLAENQLDECGLTLGDLEVIKASFKEVLLSSLHSRPKYPSMEAT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
KALEKKNALNSMNGYKQTKTSSGKIN
HHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]