| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327851
Identifier: 116327851
GI number: 116327851
Start: 1330486
End: 1332489
Strand: Direct
Name: 116327851
Synonym: LBL_1129
Alternate gene names: NA
Gene position: 1330486-1332489 (Clockwise)
Preceding gene: 116327843
Following gene: 116327855
Centisome position: 36.81
GC content: 40.12
Gene sequence:
>2004_bases ATGAGTAGCGATTCAGTATTATTTCAGGAACTCGATAAACTGGAACAGAACGACCTGAAGAAGGTCGCAGCTTTATGGAA TCTTTCCAAACTCCCTTATAAAGAAAAAAATAAGAACGTAACATATATCTATGAAATTTTCCAGGACGATTTTTATCTAA AAGGAGTTCTTGAAAAACTCACTCAACTTCAGGTTACCATTTATACGAGTATTCTTAAAAATAAGAACGTGCTGACTCTC GGGGAAATTTCGAGAAAAGTAAACATCCCCCCGATTAACGTCGAGATGGAATTGAATCTTCTTCGAAAATATCAACTTGT ATACCAGAGAAAAAATCGCGAACGTCTCACGAATAATTTAGATAAATATCATGCGTTTGAGGAAATCGCAGATCTAGTTC CTCTCGAACAAAATCTCAAAGGGGACAAATACAAGATCTCCTTGGAAAAATATCTCGATCGTAAAAAAATGACCGAGATT TCCGAAGAATGGAAGGCTGCCGTTAAGGCTCCGAAACAACTCGACGGAATGAAGAAGTTTTATTCCATCGCTTGTTCCGA GGAAGGAATCGATCTGAATCTTCAGTCTCTTGCCGATTTGGAAAGAGATACGCTTGTTCGAATCTATCTGAGCGGCGGTG TTTCGGAAGCGGAAGACATCCGTAGTTACGTGGTGACCAGCCGTGGAAAATACGAGCAGATCATTCCCTCTTTGATTTTA AAGGGACTTATCGTGGATGTTTGTTTCGTGGACGAAAAATTCGTCCGTGTATTCGTGATTCCCGATGAAATTTTAAAATA CGTTCAGACGCATCCGATTCTTCCTTCCGTTAAAAAAGGGACCAAACAAAGAACGGAAAAACTTGCGACGAACGATCTTG ATTTCTTTCTCAATACGAAAAAATTAATTTCCTACATCAGCCGTAAGGGATTGGTTCTCGCGAAATCCGGAAAAGTAAAA CAAGCCGATCACAAAAGGACGGAGCAGGAACTGCTCAATCCGGATATAGGAATTTTTCCGGAGAAGAGTCAAATCTATCA GATGGAACTCATATTACCGGTGTTGAAACTTTTGAATTTAGTGGATATTAAAGGTGAAAACATCGTCCTCAAAGAAGACG TAGAAGAATTTAACAGAAAAGATATCTTCGAAATCATGAAACTTGTGGTGCACGAGGTTAATGAGGCTCGTATGAAACGG GTTGTGCCTGCCGAAGTATTTGTCGCGACTGAAATGCCTTTTTACGATAAGCCTATATTGGACAAATGTGTGAGTCTCAT CATCAAGGCGAAACGAATTCATCTATCGGTGATTTTTTCCAATATCATTCGGGAACATATGATTCTTTCTCCCGGATTTA GGACGAAAAACTTTCAGTCCGACCTTGCGGAATTTCGTAAGGAAATCATGAGCGTCATTTTTTATCTGCATTTGTTTGGA CTTTTGGAAGTAGAATATCCGAACCGCTTTCTCACTCTTTCTAAATTGGGAGAATACTTCTTTCAAACCGGAGAACTTTC CCATAAGACGGAGAAGGGTGGGATCACGATCAATCCGGACTTTACGATCATTGCGTTCCCGGATCGGGTTTCGATTTACG GACTTCATCTTCTGAAAGCTTTTACCGAACTTAGGGATTACGATCGTGTTTATACGTTTGTTCTGACCAAAGAAGCGTTT CAATTGGGGATCCTTCTCGGATACAAACCCGTAGAGTTTATCGATTTCTTAAAAAGCTCCAGTAAGGCGGATCTTGCGCA AAATCTTCTTTTTTTATTGGAAGATTGGGGTGGAAATCTTCCCGTAGTAGATATCACGGAGGATTGTGTTCTGGTTCGTA CGAAAGATCAGAATACGATGGAGTTATTGCTCGGACAGATTAAGGGAAAAAAGATCATTTTGGATGAAATCGGTCCTACA GCCGTTTTGGTCGATAAAAATCGAGTGCAAGATGTGATTACGGTTTCCGAAAAACTAAATCTGATCGTAAATCTAACCCG CTGA
Upstream 100 bases:
>100_bases CCGGCGAATGCCTGCGGGTCGAAACTGCTTTTTTGTTTACGAACGAACTTAAATTCTGATTATGGCTACATAAAATACTC CATCCGGTGTATCCCCTCCT
Downstream 100 bases:
>100_bases AACGTGAAACGGGTTTTTTATATTTGTTTTTGATTTATAAGATTTTTCTTTTAAAAGGAAAACATCATATTTTATTCTAA TCATTTTTTTAAAAAAACTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 667; Mature: 666
Protein sequence:
>667_residues MSSDSVLFQELDKLEQNDLKKVAALWNLSKLPYKEKNKNVTYIYEIFQDDFYLKGVLEKLTQLQVTIYTSILKNKNVLTL GEISRKVNIPPINVEMELNLLRKYQLVYQRKNRERLTNNLDKYHAFEEIADLVPLEQNLKGDKYKISLEKYLDRKKMTEI SEEWKAAVKAPKQLDGMKKFYSIACSEEGIDLNLQSLADLERDTLVRIYLSGGVSEAEDIRSYVVTSRGKYEQIIPSLIL KGLIVDVCFVDEKFVRVFVIPDEILKYVQTHPILPSVKKGTKQRTEKLATNDLDFFLNTKKLISYISRKGLVLAKSGKVK QADHKRTEQELLNPDIGIFPEKSQIYQMELILPVLKLLNLVDIKGENIVLKEDVEEFNRKDIFEIMKLVVHEVNEARMKR VVPAEVFVATEMPFYDKPILDKCVSLIIKAKRIHLSVIFSNIIREHMILSPGFRTKNFQSDLAEFRKEIMSVIFYLHLFG LLEVEYPNRFLTLSKLGEYFFQTGELSHKTEKGGITINPDFTIIAFPDRVSIYGLHLLKAFTELRDYDRVYTFVLTKEAF QLGILLGYKPVEFIDFLKSSSKADLAQNLLFLLEDWGGNLPVVDITEDCVLVRTKDQNTMELLLGQIKGKKIILDEIGPT AVLVDKNRVQDVITVSEKLNLIVNLTR
Sequences:
>Translated_667_residues MSSDSVLFQELDKLEQNDLKKVAALWNLSKLPYKEKNKNVTYIYEIFQDDFYLKGVLEKLTQLQVTIYTSILKNKNVLTL GEISRKVNIPPINVEMELNLLRKYQLVYQRKNRERLTNNLDKYHAFEEIADLVPLEQNLKGDKYKISLEKYLDRKKMTEI SEEWKAAVKAPKQLDGMKKFYSIACSEEGIDLNLQSLADLERDTLVRIYLSGGVSEAEDIRSYVVTSRGKYEQIIPSLIL KGLIVDVCFVDEKFVRVFVIPDEILKYVQTHPILPSVKKGTKQRTEKLATNDLDFFLNTKKLISYISRKGLVLAKSGKVK QADHKRTEQELLNPDIGIFPEKSQIYQMELILPVLKLLNLVDIKGENIVLKEDVEEFNRKDIFEIMKLVVHEVNEARMKR VVPAEVFVATEMPFYDKPILDKCVSLIIKAKRIHLSVIFSNIIREHMILSPGFRTKNFQSDLAEFRKEIMSVIFYLHLFG LLEVEYPNRFLTLSKLGEYFFQTGELSHKTEKGGITINPDFTIIAFPDRVSIYGLHLLKAFTELRDYDRVYTFVLTKEAF QLGILLGYKPVEFIDFLKSSSKADLAQNLLFLLEDWGGNLPVVDITEDCVLVRTKDQNTMELLLGQIKGKKIILDEIGPT AVLVDKNRVQDVITVSEKLNLIVNLTR >Mature_666_residues SSDSVLFQELDKLEQNDLKKVAALWNLSKLPYKEKNKNVTYIYEIFQDDFYLKGVLEKLTQLQVTIYTSILKNKNVLTLG EISRKVNIPPINVEMELNLLRKYQLVYQRKNRERLTNNLDKYHAFEEIADLVPLEQNLKGDKYKISLEKYLDRKKMTEIS EEWKAAVKAPKQLDGMKKFYSIACSEEGIDLNLQSLADLERDTLVRIYLSGGVSEAEDIRSYVVTSRGKYEQIIPSLILK GLIVDVCFVDEKFVRVFVIPDEILKYVQTHPILPSVKKGTKQRTEKLATNDLDFFLNTKKLISYISRKGLVLAKSGKVKQ ADHKRTEQELLNPDIGIFPEKSQIYQMELILPVLKLLNLVDIKGENIVLKEDVEEFNRKDIFEIMKLVVHEVNEARMKRV VPAEVFVATEMPFYDKPILDKCVSLIIKAKRIHLSVIFSNIIREHMILSPGFRTKNFQSDLAEFRKEIMSVIFYLHLFGL LEVEYPNRFLTLSKLGEYFFQTGELSHKTEKGGITINPDFTIIAFPDRVSIYGLHLLKAFTELRDYDRVYTFVLTKEAFQ LGILLGYKPVEFIDFLKSSSKADLAQNLLFLLEDWGGNLPVVDITEDCVLVRTKDQNTMELLLGQIKGKKIILDEIGPTA VLVDKNRVQDVITVSEKLNLIVNLTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77030; Mature: 76899
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDSVLFQELDKLEQNDLKKVAALWNLSKLPYKEKNKNVTYIYEIFQDDFYLKGVLEKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHCCHHHHHHHHHH TQLQVTIYTSILKNKNVLTLGEISRKVNIPPINVEMELNLLRKYQLVYQRKNRERLTNNL HHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH DKYHAFEEIADLVPLEQNLKGDKYKISLEKYLDRKKMTEISEEWKAAVKAPKQLDGMKKF HHHHHHHHHHHHCCCHHCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHH YSIACSEEGIDLNLQSLADLERDTLVRIYLSGGVSEAEDIRSYVVTSRGKYEQIIPSLIL HHHHCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHH KGLIVDVCFVDEKFVRVFVIPDEILKYVQTHPILPSVKKGTKQRTEKLATNDLDFFLNTK HHHHHHHHEECCEEEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHCCHH KLISYISRKGLVLAKSGKVKQADHKRTEQELLNPDIGIFPEKSQIYQMELILPVLKLLNL HHHHHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VDIKGENIVLKEDVEEFNRKDIFEIMKLVVHEVNEARMKRVVPAEVFVATEMPFYDKPIL HCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCHHH DKCVSLIIKAKRIHLSVIFSNIIREHMILSPGFRTKNFQSDLAEFRKEIMSVIFYLHLFG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLEVEYPNRFLTLSKLGEYFFQTGELSHKTEKGGITINPDFTIIAFPDRVSIYGLHLLKA HEEEECCCCEEEHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHH FTELRDYDRVYTFVLTKEAFQLGILLGYKPVEFIDFLKSSSKADLAQNLLFLLEDWGGNL HHHHHHHHHHHHHEEEHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC PVVDITEDCVLVRTKDQNTMELLLGQIKGKKIILDEIGPTAVLVDKNRVQDVITVSEKLN CEEEECCCEEEEEECCCCHHHHHHHHHCCCEEEEECCCCEEEEECCHHHHHHHHHHHHCE LIVNLTR EEEEECC >Mature Secondary Structure SSDSVLFQELDKLEQNDLKKVAALWNLSKLPYKEKNKNVTYIYEIFQDDFYLKGVLEKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHCCHHHHHHHHHH TQLQVTIYTSILKNKNVLTLGEISRKVNIPPINVEMELNLLRKYQLVYQRKNRERLTNNL HHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH DKYHAFEEIADLVPLEQNLKGDKYKISLEKYLDRKKMTEISEEWKAAVKAPKQLDGMKKF HHHHHHHHHHHHCCCHHCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHH YSIACSEEGIDLNLQSLADLERDTLVRIYLSGGVSEAEDIRSYVVTSRGKYEQIIPSLIL HHHHCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHH KGLIVDVCFVDEKFVRVFVIPDEILKYVQTHPILPSVKKGTKQRTEKLATNDLDFFLNTK HHHHHHHHEECCEEEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHCCHH KLISYISRKGLVLAKSGKVKQADHKRTEQELLNPDIGIFPEKSQIYQMELILPVLKLLNL HHHHHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VDIKGENIVLKEDVEEFNRKDIFEIMKLVVHEVNEARMKRVVPAEVFVATEMPFYDKPIL HCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCHHH DKCVSLIIKAKRIHLSVIFSNIIREHMILSPGFRTKNFQSDLAEFRKEIMSVIFYLHLFG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLEVEYPNRFLTLSKLGEYFFQTGELSHKTEKGGITINPDFTIIAFPDRVSIYGLHLLKA HEEEECCCCEEEHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHH FTELRDYDRVYTFVLTKEAFQLGILLGYKPVEFIDFLKSSSKADLAQNLLFLLEDWGGNL HHHHHHHHHHHHHEEEHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC PVVDITEDCVLVRTKDQNTMELLLGQIKGKKIILDEIGPTAVLVDKNRVQDVITVSEKLN CEEEECCCEEEEEECCCCHHHHHHHHHCCCEEEEECCCCEEEEECCHHHHHHHHHHHHCE LIVNLTR EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA