| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327816
Identifier: 116327816
GI number: 116327816
Start: 1273861
End: 1275012
Strand: Direct
Name: 116327816
Synonym: LBL_1084
Alternate gene names: NA
Gene position: 1273861-1275012 (Clockwise)
Preceding gene: 116327813
Following gene: 116327820
Centisome position: 35.24
GC content: 40.45
Gene sequence:
>1152_bases ATGTCGATCGCACTCAAAAGAAAAGAAAGAAAAATTCAAATCGGAGAATTTTGGACCTCTCGCCAGAGGCAATCTCATTC CATTCATTACGGTGTAAGTTATCGTGCCTCGTTTAAACCCGAACTCCCTGCATTTTTTTTGGATCGATACCTTTCTAAAA ATAAGGGTGTCGTTTTGGATCCTTTCGGAGGTAGAGGTACTACTTCCATTCAAGCGAATTTGGAAGGCCACTTCGCAATT CACAATGATATCAGTCCGATGTCTTTGTTTCTTGCTAGGTCCAGACAAACGATTCCTTCTCTCGACAGTATGGAAAGAAT TTTGGATCGACTCGATTTGAAAAAGAAAACTCAAGAAGAAAAAGAAGACAAGGATCTGCTCGCTTTTTATCATAAGGACA CTCTAAACGAAATCAAAAATTTAAAACGAATTCTTTCCCGGGATCTTTCTCCGGAGATCCAATACATTGGGGTCACGGCT CTTTCCAGACTTCACGGACATAGTGATGGATTTTTTTCGGTTTATAGTTTTCCGCAGATTTCGATTCCTCCGACGGCTCA AAAACGAAACAATGAAAAAAAGGGAATCAAACCGGAATACAAGGAAATTAAATCTCGGATCTTGCAGAAAATGAAGCGGG ATCTAAAGTCTCCACTTCCTCCGTTTTATCATGAATTTTCAGGCAGAAATCGTTATACGAATCATTCCTCTTTGTACTTG GAATCTATGGAGGATGGAATTGCGGATCTTGTCGTTACTTCTCCGCCTTTTCTTGATAAGGTGAACTATGAAGAGGATAA TTGGCTTCGTTATTGGTTTTTGGATATAGAACTTCCGGATCATAAAAAGCCGAGTATTTTTTCCACTCTCGATGCTTGGA TGGAATTTATCCGGGAAACTTTGAAAGAACTTTCCAGAGTTCTCAAGTCGAACGGGGTTTGTGTCATGGAAGTGGGGGAT ATCAAAAAGGGTTCCGCTGTTTTCAATTTGGACGAGTACGTGATTCAGGCCGCTTCCGCTTCCGGTTTAGAATGGGAAAC GACTTTTATCAACGATCAAAAATTCACGAAACTTTCCAATTGCTGGAACGTATCGAATAACGAAAAAGGTACGAACTCAA ATCGCTGCGTGGTCTTTCGGAATTTTAAGTGA
Upstream 100 bases:
>100_bases TGTATTCGTTTACGAGATTGTTTCCGTTTCCGGGCGATTCTTTTTTTCTCAGGGGAAAACTGCGAGAAGACCGAAAATCT TTTCATACGAGGTTTTTCGG
Downstream 100 bases:
>100_bases AAGCCGCGGCGGATCGCTTGTTTGACGGTTGCGGAGTCGCTTTGTTGTGATCTGCGAGTTTTCGCGATTGGTTTCCCGAA GTTTATCCGTATGTCGTAGA
Product: DNA methylase
Products: NA
Alternate protein names: DNA Methylase; DNA Methylase; Site-Specific DNA-Methyltransferase; DNA Methylase N-4/N-6 Domain Protein; Type II R/M System
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MSIALKRKERKIQIGEFWTSRQRQSHSIHYGVSYRASFKPELPAFFLDRYLSKNKGVVLDPFGGRGTTSIQANLEGHFAI HNDISPMSLFLARSRQTIPSLDSMERILDRLDLKKKTQEEKEDKDLLAFYHKDTLNEIKNLKRILSRDLSPEIQYIGVTA LSRLHGHSDGFFSVYSFPQISIPPTAQKRNNEKKGIKPEYKEIKSRILQKMKRDLKSPLPPFYHEFSGRNRYTNHSSLYL ESMEDGIADLVVTSPPFLDKVNYEEDNWLRYWFLDIELPDHKKPSIFSTLDAWMEFIRETLKELSRVLKSNGVCVMEVGD IKKGSAVFNLDEYVIQAASASGLEWETTFINDQKFTKLSNCWNVSNNEKGTNSNRCVVFRNFK
Sequences:
>Translated_383_residues MSIALKRKERKIQIGEFWTSRQRQSHSIHYGVSYRASFKPELPAFFLDRYLSKNKGVVLDPFGGRGTTSIQANLEGHFAI HNDISPMSLFLARSRQTIPSLDSMERILDRLDLKKKTQEEKEDKDLLAFYHKDTLNEIKNLKRILSRDLSPEIQYIGVTA LSRLHGHSDGFFSVYSFPQISIPPTAQKRNNEKKGIKPEYKEIKSRILQKMKRDLKSPLPPFYHEFSGRNRYTNHSSLYL ESMEDGIADLVVTSPPFLDKVNYEEDNWLRYWFLDIELPDHKKPSIFSTLDAWMEFIRETLKELSRVLKSNGVCVMEVGD IKKGSAVFNLDEYVIQAASASGLEWETTFINDQKFTKLSNCWNVSNNEKGTNSNRCVVFRNFK >Mature_382_residues SIALKRKERKIQIGEFWTSRQRQSHSIHYGVSYRASFKPELPAFFLDRYLSKNKGVVLDPFGGRGTTSIQANLEGHFAIH NDISPMSLFLARSRQTIPSLDSMERILDRLDLKKKTQEEKEDKDLLAFYHKDTLNEIKNLKRILSRDLSPEIQYIGVTAL SRLHGHSDGFFSVYSFPQISIPPTAQKRNNEKKGIKPEYKEIKSRILQKMKRDLKSPLPPFYHEFSGRNRYTNHSSLYLE SMEDGIADLVVTSPPFLDKVNYEEDNWLRYWFLDIELPDHKKPSIFSTLDAWMEFIRETLKELSRVLKSNGVCVMEVGDI KKGSAVFNLDEYVIQAASASGLEWETTFINDQKFTKLSNCWNVSNNEKGTNSNRCVVFRNFK
Specific function: Unknown
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44437; Mature: 44306
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS00093 N4_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIALKRKERKIQIGEFWTSRQRQSHSIHYGVSYRASFKPELPAFFLDRYLSKNKGVVLD CCCCCCCCCCEEEHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEE PFGGRGTTSIQANLEGHFAIHNDISPMSLFLARSRQTIPSLDSMERILDRLDLKKKTQEE CCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH KEDKDLLAFYHKDTLNEIKNLKRILSRDLSPEIQYIGVTALSRLHGHSDGFFSVYSFPQI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCCCEEEEECCCCC SIPPTAQKRNNEKKGIKPEYKEIKSRILQKMKRDLKSPLPPFYHEFSGRNRYTNHSSLYL CCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHEEH ESMEDGIADLVVTSPPFLDKVNYEEDNWLRYWFLDIELPDHKKPSIFSTLDAWMEFIRET HHHHCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH LKELSRVLKSNGVCVMEVGDIKKGSAVFNLDEYVIQAASASGLEWETTFINDQKFTKLSN HHHHHHHHHCCCEEEEEECCCCCCCEEEEHHHHHHHHHCCCCCEEEEEEECCHHHHHHHH CWNVSNNEKGTNSNRCVVFRNFK CCCCCCCCCCCCCCCEEEEECCC >Mature Secondary Structure SIALKRKERKIQIGEFWTSRQRQSHSIHYGVSYRASFKPELPAFFLDRYLSKNKGVVLD CCCCCCCCCEEEHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEE PFGGRGTTSIQANLEGHFAIHNDISPMSLFLARSRQTIPSLDSMERILDRLDLKKKTQEE CCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH KEDKDLLAFYHKDTLNEIKNLKRILSRDLSPEIQYIGVTALSRLHGHSDGFFSVYSFPQI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCCCEEEEECCCCC SIPPTAQKRNNEKKGIKPEYKEIKSRILQKMKRDLKSPLPPFYHEFSGRNRYTNHSSLYL CCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHEEH ESMEDGIADLVVTSPPFLDKVNYEEDNWLRYWFLDIELPDHKKPSIFSTLDAWMEFIRET HHHHCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH LKELSRVLKSNGVCVMEVGDIKKGSAVFNLDEYVIQAASASGLEWETTFINDQKFTKLSN HHHHHHHHHCCCEEEEEECCCCCCCEEEEHHHHHHHHHCCCCCEEEEEEECCHHHHHHHH CWNVSNNEKGTNSNRCVVFRNFK CCCCCCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA