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The map label for this gene is recJ [H]

Identifier: 116327798

GI number: 116327798

Start: 1244428

End: 1246365

Strand: Reverse

Name: recJ [H]

Synonym: LBL_1061

Alternate gene names: 116327798

Gene position: 1246365-1244428 (Counterclockwise)

Preceding gene: 116327799

Following gene: 116327796

Centisome position: 34.48

GC content: 43.29

Gene sequence:

>1938_bases
ATGCCTAAACTTTCCCCTTTTTCACACGGCCCGGGCTTACAGGAATTACATCCCTCCTCCGGGTTCCGTCAGTACTTGAG
TCCTCTTCAGCATCGATTCTACGAAACCCATTTACGGGAAAAATCCCACCCGGAACATCTTCTCTATCACGGACTCAGAG
AACTCCCTTCCCCGTTTTTATTACCGGACTTGGAACCGGCCTTGGAATTACTGAAAGAATTCGTTCGGACCGAAAAAAAG
ATTCTTCTTTTCGGTGATAGGGACTGCGATGGAGTTTCTTCCACGAGTCTGCTCGGTGGATTTTTAAAAAAGATCCATCG
GGGAGAATTGATCTTAAAAACTTCGAACGAAGAAGACTACGGACTCTGCCCCGCCGCCCTCGAATTCGTGAAAAAAAACA
AACCTGATCTTTTGATCACTTTGGACTTCGGAACCACAAATCACGTTCAAATTAACGAGCTCGCCTCTCTGGGAATCAAG
GTAATCGTTCTCGATCATCACGAGATTCCGGAACAAATTCCCGATTGTTATCTCGTTTCTCCAAAAAGACAAGACTCCCA
ATATCCGAGCGAAAAAATCTGCACGTCGGTTCTTGCCCTCAAATTCATACAAGCTTATCTCTACTCCTCCTTGGAAGAAT
ACAAACACGCGACCTGGATTGGAGACGGAAATTCCCTATTTTCAGGATATCTAATATACCGAGGAAAACTTATCTTTCAA
GGAGACAGACAGGAAGCGGAATCCAAATTTTCCATTCCGATTCAGGATAAAAGTTATACCTTCGAATCCCCTTATCCGGA
AAGGGAATGGTTCTATCAGGAATTTTTAAAATACCCGGCGATCTTAGAACAGTATCTTCAGAACTTCGATTTGGCTTCGA
TCGGAACCGTTTCCGACATGATGCCCCTCCACGGCGAAAATAGAATTATCGTAAAAGAAGGTTGCAAGATTCTGTTCAAG
CTCCATCGCAGGGAAACCAGACATAGAGAAGGGCTCTTTCAACTCCTTCAGCTGATGGAACTCGCGGATAAACATGTGAC
TTCCAAGGATTTAGGTTGGGTACTCGGGCCCATGATCAATTCCGCTGGAAGAATGAATCGCACAGAAGTCGCATTAAATC
TATTATTGGAAGAAGATCCACAACGCGCTCAGACCGGCGCTAAAGAACTTCAAAAGCTCAACGAGGAAAGAAAAGAAAGA
ACCAAGAGAAACTTATTCAAGGTAGACGGTTTTTTAAAGCGAAAAAAGGAAAGAACCGAAAAATCGGTCCTCTTCTGTTA
CGAACCGGATTTCGAACCGGGCGTTTCGGGTATCGTAGCCACAAGACTGGTGGAAGAATACAAAAAACCGGTTTTATTCA
TCACTCCGGATCACGGACACGCAAAAGGAAGTATTCGTGCTTACGGAAAAGAAAACGTTTTGAATCTTCTCAAAAAAGCG
GAATCTATTTTTCTACAATTCGGGGGACACAAGGAAGCAGGCGGATTTTCTCTCGATCTCGAAAAAATTCCAGAACTTGC
AAAAACGATTTTTGAACACGCAGACAACTGGCTCGAAGAAGAACAAAAACAAACGACTCTCGAACAAACGCCAAGTCTCA
TTTCGTTACGACCGGAAGAATTGAATCCCAAAATCTTTCAGGAACTTTCCATCTTCGAACCGTTTGGTCACGAGAATCCA
GTCCCATTGTATTCGATTAAAAACGCGAAGGTTTACCATACAAAACCGATGACGGACGGCAAACACGTCCGTTTTAGAAT
CTTAGGTGCTCCCGAATCGATTCAGTGTTTGATTTGGAACCGGGGAAAAGATTTTTTAGAACTACTCAGCAAGAACGAAA
GTTTGGACCTTTGGGGCTCTTTGGAAGAGTCCACCTTTCGATCCAAAACTTCTCTTCAATTTGTAGTAAATTACTTTCAA
AAATCGGAAAATTACTAA

Upstream 100 bases:

>100_bases
TAGCCATTCGAAAAACCGGTAAAGTAATCGGTGATATCCGCACGCCCGATTTAGAGATCGAATCCGGAGCGAAATTCAGC
GGAAACAGCGCTATGTAAGA

Downstream 100 bases:

>100_bases
GCGCCGTATCAAGACCCACTGCGAAGTTTAGAACTTGTCCCAAAACCTGAAAAGAAATCAACACAATCATTTTATAAGTT
CGTAATAGAACGTGGAAATT

Product: single-stranded DNA-specific exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 644

Protein sequence:

>645_residues
MPKLSPFSHGPGLQELHPSSGFRQYLSPLQHRFYETHLREKSHPEHLLYHGLRELPSPFLLPDLEPALELLKEFVRTEKK
ILLFGDRDCDGVSSTSLLGGFLKKIHRGELILKTSNEEDYGLCPAALEFVKKNKPDLLITLDFGTTNHVQINELASLGIK
VIVLDHHEIPEQIPDCYLVSPKRQDSQYPSEKICTSVLALKFIQAYLYSSLEEYKHATWIGDGNSLFSGYLIYRGKLIFQ
GDRQEAESKFSIPIQDKSYTFESPYPEREWFYQEFLKYPAILEQYLQNFDLASIGTVSDMMPLHGENRIIVKEGCKILFK
LHRRETRHREGLFQLLQLMELADKHVTSKDLGWVLGPMINSAGRMNRTEVALNLLLEEDPQRAQTGAKELQKLNEERKER
TKRNLFKVDGFLKRKKERTEKSVLFCYEPDFEPGVSGIVATRLVEEYKKPVLFITPDHGHAKGSIRAYGKENVLNLLKKA
ESIFLQFGGHKEAGGFSLDLEKIPELAKTIFEHADNWLEEEQKQTTLEQTPSLISLRPEELNPKIFQELSIFEPFGHENP
VPLYSIKNAKVYHTKPMTDGKHVRFRILGAPESIQCLIWNRGKDFLELLSKNESLDLWGSLEESTFRSKTSLQFVVNYFQ
KSENY

Sequences:

>Translated_645_residues
MPKLSPFSHGPGLQELHPSSGFRQYLSPLQHRFYETHLREKSHPEHLLYHGLRELPSPFLLPDLEPALELLKEFVRTEKK
ILLFGDRDCDGVSSTSLLGGFLKKIHRGELILKTSNEEDYGLCPAALEFVKKNKPDLLITLDFGTTNHVQINELASLGIK
VIVLDHHEIPEQIPDCYLVSPKRQDSQYPSEKICTSVLALKFIQAYLYSSLEEYKHATWIGDGNSLFSGYLIYRGKLIFQ
GDRQEAESKFSIPIQDKSYTFESPYPEREWFYQEFLKYPAILEQYLQNFDLASIGTVSDMMPLHGENRIIVKEGCKILFK
LHRRETRHREGLFQLLQLMELADKHVTSKDLGWVLGPMINSAGRMNRTEVALNLLLEEDPQRAQTGAKELQKLNEERKER
TKRNLFKVDGFLKRKKERTEKSVLFCYEPDFEPGVSGIVATRLVEEYKKPVLFITPDHGHAKGSIRAYGKENVLNLLKKA
ESIFLQFGGHKEAGGFSLDLEKIPELAKTIFEHADNWLEEEQKQTTLEQTPSLISLRPEELNPKIFQELSIFEPFGHENP
VPLYSIKNAKVYHTKPMTDGKHVRFRILGAPESIQCLIWNRGKDFLELLSKNESLDLWGSLEESTFRSKTSLQFVVNYFQ
KSENY
>Mature_644_residues
PKLSPFSHGPGLQELHPSSGFRQYLSPLQHRFYETHLREKSHPEHLLYHGLRELPSPFLLPDLEPALELLKEFVRTEKKI
LLFGDRDCDGVSSTSLLGGFLKKIHRGELILKTSNEEDYGLCPAALEFVKKNKPDLLITLDFGTTNHVQINELASLGIKV
IVLDHHEIPEQIPDCYLVSPKRQDSQYPSEKICTSVLALKFIQAYLYSSLEEYKHATWIGDGNSLFSGYLIYRGKLIFQG
DRQEAESKFSIPIQDKSYTFESPYPEREWFYQEFLKYPAILEQYLQNFDLASIGTVSDMMPLHGENRIIVKEGCKILFKL
HRRETRHREGLFQLLQLMELADKHVTSKDLGWVLGPMINSAGRMNRTEVALNLLLEEDPQRAQTGAKELQKLNEERKERT
KRNLFKVDGFLKRKKERTEKSVLFCYEPDFEPGVSGIVATRLVEEYKKPVLFITPDHGHAKGSIRAYGKENVLNLLKKAE
SIFLQFGGHKEAGGFSLDLEKIPELAKTIFEHADNWLEEEQKQTTLEQTPSLISLRPEELNPKIFQELSIFEPFGHENPV
PLYSIKNAKVYHTKPMTDGKHVRFRILGAPESIQCLIWNRGKDFLELLSKNESLDLWGSLEESTFRSKTSLQFVVNYFQK
SENY

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=516, Percent_Identity=26.7441860465116, Blast_Score=174, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008279
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 74388; Mature: 74257

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLSPFSHGPGLQELHPSSGFRQYLSPLQHRFYETHLREKSHPEHLLYHGLRELPSPFL
CCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
LPDLEPALELLKEFVRTEKKILLFGDRDCDGVSSTSLLGGFLKKIHRGELILKTSNEEDY
CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCC
GLCPAALEFVKKNKPDLLITLDFGTTNHVQINELASLGIKVIVLDHHEIPEQIPDCYLVS
CCCHHHHHHHHCCCCCEEEEEECCCCCCEEHHHHHHCCEEEEEECCCHHHHHCCCCEEEC
PKRQDSQYPSEKICTSVLALKFIQAYLYSSLEEYKHATWIGDGNSLFSGYLIYRGKLIFQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCEEEEECEEEEE
GDRQEAESKFSIPIQDKSYTFESPYPEREWFYQEFLKYPAILEQYLQNFDLASIGTVSDM
CCHHHCCCCCCCEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHC
MPLHGENRIIVKEGCKILFKLHRRETRHREGLFQLLQLMELADKHVTSKDLGWVLGPMIN
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SAGRMNRTEVALNLLLEEDPQRAQTGAKELQKLNEERKERTKRNLFKVDGFLKRKKERTE
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KSVLFCYEPDFEPGVSGIVATRLVEEYKKPVLFITPDHGHAKGSIRAYGKENVLNLLKKA
CCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECCHHHHHHHHHHH
ESIFLQFGGHKEAGGFSLDLEKIPELAKTIFEHADNWLEEEQKQTTLEQTPSLISLRPEE
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHH
LNPKIFQELSIFEPFGHENPVPLYSIKNAKVYHTKPMTDGKHVRFRILGAPESIQCLIWN
CCHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEC
RGKDFLELLSKNESLDLWGSLEESTFRSKTSLQFVVNYFQKSENY
CCHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PKLSPFSHGPGLQELHPSSGFRQYLSPLQHRFYETHLREKSHPEHLLYHGLRELPSPFL
CCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
LPDLEPALELLKEFVRTEKKILLFGDRDCDGVSSTSLLGGFLKKIHRGELILKTSNEEDY
CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCC
GLCPAALEFVKKNKPDLLITLDFGTTNHVQINELASLGIKVIVLDHHEIPEQIPDCYLVS
CCCHHHHHHHHCCCCCEEEEEECCCCCCEEHHHHHHCCEEEEEECCCHHHHHCCCCEEEC
PKRQDSQYPSEKICTSVLALKFIQAYLYSSLEEYKHATWIGDGNSLFSGYLIYRGKLIFQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCEEEEECEEEEE
GDRQEAESKFSIPIQDKSYTFESPYPEREWFYQEFLKYPAILEQYLQNFDLASIGTVSDM
CCHHHCCCCCCCEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHC
MPLHGENRIIVKEGCKILFKLHRRETRHREGLFQLLQLMELADKHVTSKDLGWVLGPMIN
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SAGRMNRTEVALNLLLEEDPQRAQTGAKELQKLNEERKERTKRNLFKVDGFLKRKKERTE
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KSVLFCYEPDFEPGVSGIVATRLVEEYKKPVLFITPDHGHAKGSIRAYGKENVLNLLKKA
CCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECCHHHHHHHHHHH
ESIFLQFGGHKEAGGFSLDLEKIPELAKTIFEHADNWLEEEQKQTTLEQTPSLISLRPEE
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHH
LNPKIFQELSIFEPFGHENPVPLYSIKNAKVYHTKPMTDGKHVRFRILGAPESIQCLIWN
CCHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEC
RGKDFLELLSKNESLDLWGSLEESTFRSKTSLQFVVNYFQKSENY
CCHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1987126; 9278503; 2649886 [H]