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The map label for this gene is 116327789

Identifier: 116327789

GI number: 116327789

Start: 1226527

End: 1227372

Strand: Direct

Name: 116327789

Synonym: LBL_1049

Alternate gene names: NA

Gene position: 1226527-1227372 (Clockwise)

Preceding gene: 116327788

Following gene: 116327794

Centisome position: 33.93

GC content: 41.96

Gene sequence:

>846_bases
CTGTATTCTAAGCATTTTTTTTCCAACTTTCAAGATACGGATAAAAACGAACCTTCCACGATCGCACAACCTTCGCGGAT
TCAAGGAATCTTAAGTGAAATCTTAGCCGTTATCCGAGAAATCAAAGCAAGTGTGGAATCTTCTGAATCTTCCAATCCGA
ACCCAACCGCATCGGTTACGAATAATAACGGAGAAGATCCCAACGAGATTTTTAATAGAGCTTATCGCACAAATGAAAAG
GGCGATTATCTCAAAGCGATAAAAGAATATTCTAAGTATTTGGAATTGGTTCCGGGAGACGCTTCCGGTTATTACAATCG
AGGTTTGGCAAAATATACTTTGAAACAATATGGTGAGGCAGTGAAAGATTTCGACAAAGCGGCGGAGACCGATCCGAATA
AGGCTTCCGTCTTTCTCTATAAAGGTTATGGCAACGAAATGCTCGATAACTGTGCTCAGGCAATCGACGATTTTCAGAAA
GCGATCGAACTCGGTGAAAAGAACGACCCGGAACTTTACGGCCATAAGGCGCGTTGTGAAAATCATGATGAGAATTACGA
CGAAGGTTTTAAAGACGCCTTGAAAGCGGTAAATCTGGATAAAAAGAACGTTTACGCTTTCTTTGAATTAGCTTATGCTC
AGTACGGTTTGGAAAGATATTCGGATTCGGTTGCGAGTTATTCGATGGTTTTGCAACTCAATCCGAACGACGAGGTCGCG
TTTCATAATAGGGGGCTTGCGTATGCTTTCTTAAAGAAGATTCCGTCGGCATGTAAGGATTTTCGAAAATCTTTGGGTTT
AGGATATGCGGGCGCCAAGGATCGATTGGCAGAATACTGCAAATGA

Upstream 100 bases:

>100_bases
TTTTTCATTCAATAAAAAGTTGAATTTTGAAAGAATTTGGTTTCTCTTGCCTGATGGTTAATAAAGTTCTTCGTTATTTT
TTAATGGTGGGAATTTTGAT

Downstream 100 bases:

>100_bases
TCGATCTCGCATTAAACGTTTTGTGTAAATAGAATTCAAAAAAAATCGGACTATACCAGCTTTGACGTCCGTTTCAAAAA
ACTTTTCCTTCGTTTCAAAA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; Peptidase; O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide Repeat Family; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Tetratricopeptide Repeat Family Protein; TPR Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Domain-Containing Protein; Serine/Threonine Protein Kinase; O-Linked GlcNAc Transferase; Serine/Threonine Protein Kinase With TPR Repeats; Tetratricopeptide TPR_1 Repeat-Containing Protein; Serine/Threonine Kinase; Protein Prenyltransferase Subunit Alpha; Tetratricopeptide Repeat Domain-Containing Protein; Tetratricopeptide Repeat Protein; TPR Repeat- And Protein Kinase Domain-Containing Protein; Pentapeptide Repeat-Containing Serine/Threonine Kinase; Mitochondrial Outer Membrane; Tfp Pilus Assembly Protein PilF; TPR Repeat-Containing Protein Kinase; Glycosyl Transferase Family Protein; Periplasmic Protein

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MYSKHFFSNFQDTDKNEPSTIAQPSRIQGILSEILAVIREIKASVESSESSNPNPTASVTNNNGEDPNEIFNRAYRTNEK
GDYLKAIKEYSKYLELVPGDASGYYNRGLAKYTLKQYGEAVKDFDKAAETDPNKASVFLYKGYGNEMLDNCAQAIDDFQK
AIELGEKNDPELYGHKARCENHDENYDEGFKDALKAVNLDKKNVYAFFELAYAQYGLERYSDSVASYSMVLQLNPNDEVA
FHNRGLAYAFLKKIPSACKDFRKSLGLGYAGAKDRLAEYCK

Sequences:

>Translated_281_residues
MYSKHFFSNFQDTDKNEPSTIAQPSRIQGILSEILAVIREIKASVESSESSNPNPTASVTNNNGEDPNEIFNRAYRTNEK
GDYLKAIKEYSKYLELVPGDASGYYNRGLAKYTLKQYGEAVKDFDKAAETDPNKASVFLYKGYGNEMLDNCAQAIDDFQK
AIELGEKNDPELYGHKARCENHDENYDEGFKDALKAVNLDKKNVYAFFELAYAQYGLERYSDSVASYSMVLQLNPNDEVA
FHNRGLAYAFLKKIPSACKDFRKSLGLGYAGAKDRLAEYCK
>Mature_281_residues
MYSKHFFSNFQDTDKNEPSTIAQPSRIQGILSEILAVIREIKASVESSESSNPNPTASVTNNNGEDPNEIFNRAYRTNEK
GDYLKAIKEYSKYLELVPGDASGYYNRGLAKYTLKQYGEAVKDFDKAAETDPNKASVFLYKGYGNEMLDNCAQAIDDFQK
AIELGEKNDPELYGHKARCENHDENYDEGFKDALKAVNLDKKNVYAFFELAYAQYGLERYSDSVASYSMVLQLNPNDEVA
FHNRGLAYAFLKKIPSACKDFRKSLGLGYAGAKDRLAEYCK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31690; Mature: 31690

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSKHFFSNFQDTDKNEPSTIAQPSRIQGILSEILAVIREIKASVESSESSNPNPTASVT
CCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEC
NNNGEDPNEIFNRAYRTNEKGDYLKAIKEYSKYLELVPGDASGYYNRGLAKYTLKQYGEA
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHH
VKDFDKAAETDPNKASVFLYKGYGNEMLDNCAQAIDDFQKAIELGEKNDPELYGHKARCE
HHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHCC
NHDENYDEGFKDALKAVNLDKKNVYAFFELAYAQYGLERYSDSVASYSMVLQLNPNDEVA
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCEE
FHNRGLAYAFLKKIPSACKDFRKSLGLGYAGAKDRLAEYCK
ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MYSKHFFSNFQDTDKNEPSTIAQPSRIQGILSEILAVIREIKASVESSESSNPNPTASVT
CCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEC
NNNGEDPNEIFNRAYRTNEKGDYLKAIKEYSKYLELVPGDASGYYNRGLAKYTLKQYGEA
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHH
VKDFDKAAETDPNKASVFLYKGYGNEMLDNCAQAIDDFQKAIELGEKNDPELYGHKARCE
HHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHCC
NHDENYDEGFKDALKAVNLDKKNVYAFFELAYAQYGLERYSDSVASYSMVLQLNPNDEVA
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCEE
FHNRGLAYAFLKKIPSACKDFRKSLGLGYAGAKDRLAEYCK
ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA