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The map label for this gene is pdtaS [H]

Identifier: 116327774

GI number: 116327774

Start: 1205286

End: 1206395

Strand: Direct

Name: pdtaS [H]

Synonym: LBL_1032

Alternate gene names: 116327774

Gene position: 1205286-1206395 (Clockwise)

Preceding gene: 116327772

Following gene: 116327775

Centisome position: 33.35

GC content: 36.49

Gene sequence:

>1110_bases
ATGATTTTAAAAAGATTCCAACGCATTTACGCTAAAGAGCAGTTTATCCTAAGAGTGAGAGCTTTATACTTACTTTTTTT
TAACCTGTTAATTTTAACTTTTGCCAGTTTAACATTCGTTCTTTTTTTCTATGAAAAGGAAAAAACTTATCGTCCTAGTT
TTATACTATTCATATCCGCATCGTTCGTTTCAATTTTGTTGCTCTGGTTGGGACAATATAAAAAAGCGTTAGTTATCACG
CTGCTTTCGGTGGCGATAGGGCTTGCTTGGGCGCTGCTTTTCGGAAATCCGGTCGGAAACGTCCTACCTAGTCTTTCCAT
TCTTGTTCTCTTGTTTTTGTTATTTACGGATATTCGAACGACTATTTATGTTTCTTTATATTCGTTTACTTTAATGTTTT
TGTTTTTATACAAGCTTAATTTGAGAAACGCGTTAAACGGCGTTTATGCCGTGGATTCCGTGTTAGGTTTTTTTATTTTT
TCGATTCTTGCCTTTTTGACGGTCAATCTTTTGAATTCTTACATTAAGGAAAAAGACGAACTGATCAAGGAAATCCATCA
CAGGGTGAGGAATAATCTTCAAGTTTTGAGCGGACTTGCTGATCTTCATAGGGACGACAAATCGGATTTGCAAAGGGTAT
TATTCGAGTTTCAGAATCGAATTCTCGCGATGTCGGAAGTGCATAATTACATGTACAAAACGGATAATTATCATAGTATA
GAATTTTCGAACGTGATTGAAAGGATCATAGAAAATCTGAAAAACAAACATAAGGAATCACAAGTAGTCATACGCAATTA
TTCGGAAAAAATCGATCTGCCTATCGAAACAGCGATACCTTGTGCGATGATCTTCAACGAACTGTTGAACAATTCATTGA
CGCACGCCTTTAAGGAATCGCAGGATCCGAACATAGAGATTCGTTTTTCTAAAACGGGTGAAAATTACAAATTAATCATA
AAGGACAATGGAGTGGGAATGGCAACCCCGGTTGATTTGAAAAAACCGAATACGACCGGGTTTACCTTGATTCATATTCT
TTCCAAACAAATTCGAGCCAATTTTGAACTTTTTAACGATCGGGGTTTGGTCGCCGTTTTGGAGTTTTGA

Upstream 100 bases:

>100_bases
TAAAAACTTGAAATTCGACCGGATACGATTTACAATTTTGGAATTGTAAATGAGTTTTAGAACGGTATAATTTCGGAAAA
GATCGGTTTTTTAGGAAAGT

Downstream 100 bases:

>100_bases
TCCGGTCTGGTTTAATTTTCAAAGTTCTGTCTGTTTCAAAAAAATGTGTATTTGTTTGCTCGTTTCCGTTCGAATCCGAA
TTTCTTTTGACGAGTATACG

Product: sensor histidine kinase of a two component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MILKRFQRIYAKEQFILRVRALYLLFFNLLILTFASLTFVLFFYEKEKTYRPSFILFISASFVSILLLWLGQYKKALVIT
LLSVAIGLAWALLFGNPVGNVLPSLSILVLLFLLFTDIRTTIYVSLYSFTLMFLFLYKLNLRNALNGVYAVDSVLGFFIF
SILAFLTVNLLNSYIKEKDELIKEIHHRVRNNLQVLSGLADLHRDDKSDLQRVLFEFQNRILAMSEVHNYMYKTDNYHSI
EFSNVIERIIENLKNKHKESQVVIRNYSEKIDLPIETAIPCAMIFNELLNNSLTHAFKESQDPNIEIRFSKTGENYKLII
KDNGVGMATPVDLKKPNTTGFTLIHILSKQIRANFELFNDRGLVAVLEF

Sequences:

>Translated_369_residues
MILKRFQRIYAKEQFILRVRALYLLFFNLLILTFASLTFVLFFYEKEKTYRPSFILFISASFVSILLLWLGQYKKALVIT
LLSVAIGLAWALLFGNPVGNVLPSLSILVLLFLLFTDIRTTIYVSLYSFTLMFLFLYKLNLRNALNGVYAVDSVLGFFIF
SILAFLTVNLLNSYIKEKDELIKEIHHRVRNNLQVLSGLADLHRDDKSDLQRVLFEFQNRILAMSEVHNYMYKTDNYHSI
EFSNVIERIIENLKNKHKESQVVIRNYSEKIDLPIETAIPCAMIFNELLNNSLTHAFKESQDPNIEIRFSKTGENYKLII
KDNGVGMATPVDLKKPNTTGFTLIHILSKQIRANFELFNDRGLVAVLEF
>Mature_369_residues
MILKRFQRIYAKEQFILRVRALYLLFFNLLILTFASLTFVLFFYEKEKTYRPSFILFISASFVSILLLWLGQYKKALVIT
LLSVAIGLAWALLFGNPVGNVLPSLSILVLLFLLFTDIRTTIYVSLYSFTLMFLFLYKLNLRNALNGVYAVDSVLGFFIF
SILAFLTVNLLNSYIKEKDELIKEIHHRVRNNLQVLSGLADLHRDDKSDLQRVLFEFQNRILAMSEVHNYMYKTDNYHSI
EFSNVIERIIENLKNKHKESQVVIRNYSEKIDLPIETAIPCAMIFNELLNNSLTHAFKESQDPNIEIRFSKTGENYKLII
KDNGVGMATPVDLKKPNTTGFTLIHILSKQIRANFELFNDRGLVAVLEF

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 42827; Mature: 42827

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKRFQRIYAKEQFILRVRALYLLFFNLLILTFASLTFVLFFYEKEKTYRPSFILFISA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHH
SFVSILLLWLGQYKKALVITLLSVAIGLAWALLFGNPVGNVLPSLSILVLLFLLFTDIRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TIYVSLYSFTLMFLFLYKLNLRNALNGVYAVDSVLGFFIFSILAFLTVNLLNSYIKEKDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIKEIHHRVRNNLQVLSGLADLHRDDKSDLQRVLFEFQNRILAMSEVHNYMYKTDNYHSI
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
EFSNVIERIIENLKNKHKESQVVIRNYSEKIDLPIETAIPCAMIFNELLNNSLTHAFKES
EHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHCC
QDPNIEIRFSKTGENYKLIIKDNGVGMATPVDLKKPNTTGFTLIHILSKQIRANFELFND
CCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHEECC
RGLVAVLEF
CCCEEEECC
>Mature Secondary Structure
MILKRFQRIYAKEQFILRVRALYLLFFNLLILTFASLTFVLFFYEKEKTYRPSFILFISA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHH
SFVSILLLWLGQYKKALVITLLSVAIGLAWALLFGNPVGNVLPSLSILVLLFLLFTDIRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TIYVSLYSFTLMFLFLYKLNLRNALNGVYAVDSVLGFFIFSILAFLTVNLLNSYIKEKDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIKEIHHRVRNNLQVLSGLADLHRDDKSDLQRVLFEFQNRILAMSEVHNYMYKTDNYHSI
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
EFSNVIERIIENLKNKHKESQVVIRNYSEKIDLPIETAIPCAMIFNELLNNSLTHAFKES
EHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHCC
QDPNIEIRFSKTGENYKLIIKDNGVGMATPVDLKKPNTTGFTLIHILSKQIRANFELFND
CCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHEECC
RGLVAVLEF
CCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]