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The map label for this gene is ydgJ [H]

Identifier: 116327611

GI number: 116327611

Start: 978732

End: 979988

Strand: Direct

Name: ydgJ [H]

Synonym: LBL_0843

Alternate gene names: 116327611

Gene position: 978732-979988 (Clockwise)

Preceding gene: 116327609

Following gene: 116327612

Centisome position: 27.08

GC content: 45.74

Gene sequence:

>1257_bases
ATGATTCCCGTTTTACTGATAGGTCTGGGGAGAATCGCTTCTCTCCTGGAAAAAGATTCCTTTCGTAACCGTCCTTGCAC
GCACGCCGGAACGTTTTTTTCACCTTGGGGGAAAAAGAAATTCTTCCTTGTAGGAGCGATTGATCCATCCGAAGATCGGA
GGAACCGATTTTGCAAAGATTGGAATATTCCGAAAAACTTATGCTTCATTGATTTTAAAAATTGGGCCTCCTCGTTTTAT
TCTTCCCAAAGTAAAAAAGATCCGGCAATTGTAAGTCCGAACAATAGGTCCGAGTATGATGGGAAAACAAGACGTAGGAA
CTTTTCGGGAACACAATTTGTTCGTCAAGAAGGTCGGGATTTAGCCGACTTCAAAAATGTACATTCCGTCGATTTGCGAC
GAAAAAAAAAAGACCACAATTCTTGCGATTCGAATCCGAACTCAATCGATCCCACTTTCTGTCTTGTAGTGATTGCGACT
CCTTCCGAGACACACTACCAACTTGCAAAGGCCGCGATCGAGTTCGGGTTCCGTCATCTTTTGGTCGAAAAACCGGTTTG
TCATTCTCTTCCGCTTGCGCGCAAACTCGCGGAACTCTGTCGTAAAACGGGAACGGATCTGCGAGTCAATCACGAGAGAA
GGTATCATCCTCTTTACATTCAAGTTCGTAAATGGATCCAAGAAGAAACGTACGGACCGGTTCGAACGATACGCGCATCC
GTTTTGACTTCCGCACGAAATCCGGGCCGCGCAATCTTGGACAAGACGGGTCCACTCTTTCATGACGGAACCCACGCCGT
GGACTTACTCACTTGGTATTTGGGAATGCCGGACCGGGTCGTTTCCATTTTACGATCCTATCCGAATTCTCCCGTAGAAG
AACAGGCTTTAGCGCTGATGACTTATCCTAAGGGGGAAACGGTTTTTTTGGAAGCGGGGGGAATGAGAAATTACTTTCAA
TTCGAGTTGGATATCCAAACGGAGAACGCGCGTTTTCTTGTCGGAAACGACGAGGTTCGTTTTTGGAAATCCAAACCTTC
CCGAAAATACAAAGGATTTAAAAGTTTGACTCCGGTTTCAATTCCCGAAAAATCTTCCGCAGGCTCGAATCCATTTCTCA
ATTTATACGATTCTCTCTTTCGACATTTGTCCGGAAAATCGTCCCGGGTCACCGGGGATATGGAGGAGAATCTTCAAATT
CTCACCTTACTGGATACGATCCGGAGAAGAGCCGAAAAAAGATTCCTGGGGGTTTAG

Upstream 100 bases:

>100_bases
CCAATGTATCGATCCATGAACCAAAGAATCGCTTCGAAATCCCGCCGGGTCAAGTCAAAATAACTCTTGAGTCCGACGCC
GGAAATGGTTTCATCATCTT

Downstream 100 bases:

>100_bases
AAGTTTCACGTATGCTCGTTTCTTCCGCAGCCGAACCTCAGGAAATCCAGTCATACAAACGACACGGTAGTTCCTGGAGA
TTTTGGAATGCGAGTTCTTT

Product: oxidoreductase, NAD-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MIPVLLIGLGRIASLLEKDSFRNRPCTHAGTFFSPWGKKKFFLVGAIDPSEDRRNRFCKDWNIPKNLCFIDFKNWASSFY
SSQSKKDPAIVSPNNRSEYDGKTRRRNFSGTQFVRQEGRDLADFKNVHSVDLRRKKKDHNSCDSNPNSIDPTFCLVVIAT
PSETHYQLAKAAIEFGFRHLLVEKPVCHSLPLARKLAELCRKTGTDLRVNHERRYHPLYIQVRKWIQEETYGPVRTIRAS
VLTSARNPGRAILDKTGPLFHDGTHAVDLLTWYLGMPDRVVSILRSYPNSPVEEQALALMTYPKGETVFLEAGGMRNYFQ
FELDIQTENARFLVGNDEVRFWKSKPSRKYKGFKSLTPVSIPEKSSAGSNPFLNLYDSLFRHLSGKSSRVTGDMEENLQI
LTLLDTIRRRAEKRFLGV

Sequences:

>Translated_418_residues
MIPVLLIGLGRIASLLEKDSFRNRPCTHAGTFFSPWGKKKFFLVGAIDPSEDRRNRFCKDWNIPKNLCFIDFKNWASSFY
SSQSKKDPAIVSPNNRSEYDGKTRRRNFSGTQFVRQEGRDLADFKNVHSVDLRRKKKDHNSCDSNPNSIDPTFCLVVIAT
PSETHYQLAKAAIEFGFRHLLVEKPVCHSLPLARKLAELCRKTGTDLRVNHERRYHPLYIQVRKWIQEETYGPVRTIRAS
VLTSARNPGRAILDKTGPLFHDGTHAVDLLTWYLGMPDRVVSILRSYPNSPVEEQALALMTYPKGETVFLEAGGMRNYFQ
FELDIQTENARFLVGNDEVRFWKSKPSRKYKGFKSLTPVSIPEKSSAGSNPFLNLYDSLFRHLSGKSSRVTGDMEENLQI
LTLLDTIRRRAEKRFLGV
>Mature_418_residues
MIPVLLIGLGRIASLLEKDSFRNRPCTHAGTFFSPWGKKKFFLVGAIDPSEDRRNRFCKDWNIPKNLCFIDFKNWASSFY
SSQSKKDPAIVSPNNRSEYDGKTRRRNFSGTQFVRQEGRDLADFKNVHSVDLRRKKKDHNSCDSNPNSIDPTFCLVVIAT
PSETHYQLAKAAIEFGFRHLLVEKPVCHSLPLARKLAELCRKTGTDLRVNHERRYHPLYIQVRKWIQEETYGPVRTIRAS
VLTSARNPGRAILDKTGPLFHDGTHAVDLLTWYLGMPDRVVSILRSYPNSPVEEQALALMTYPKGETVFLEAGGMRNYFQ
FELDIQTENARFLVGNDEVRFWKSKPSRKYKGFKSLTPVSIPEKSSAGSNPFLNLYDSLFRHLSGKSSRVTGDMEENLQI
LTLLDTIRRRAEKRFLGV

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=251, Percent_Identity=26.2948207171315, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789848, Length=297, Percent_Identity=22.5589225589226, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 47938; Mature: 47938

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPVLLIGLGRIASLLEKDSFRNRPCTHAGTFFSPWGKKKFFLVGAIDPSEDRRNRFCKD
CCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCC
WNIPKNLCFIDFKNWASSFYSSQSKKDPAIVSPNNRSEYDGKTRRRNFSGTQFVRQEGRD
CCCCCCEEEEECHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHHCCCCHHHHHHHCCCC
LADFKNVHSVDLRRKKKDHNSCDSNPNSIDPTFCLVVIATPSETHYQLAKAAIEFGFRHL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHH
LVEKPVCHSLPLARKLAELCRKTGTDLRVNHERRYHPLYIQVRKWIQEETYGPVRTIRAS
HHCCCHHHCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
VLTSARNPGRAILDKTGPLFHDGTHAVDLLTWYLGMPDRVVSILRSYPNSPVEEQALALM
HHHHCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHEEEE
TYPKGETVFLEAGGMRNYFQFELDIQTENARFLVGNDEVRFWKSKPSRKYKGFKSLTPVS
ECCCCCEEEEECCCCCCEEEEEEEEEECCCEEEECCCCEEEECCCCCHHHCCCCCCCCCC
IPEKSSAGSNPFLNLYDSLFRHLSGKSSRVTGDMEENLQILTLLDTIRRRAEKRFLGV
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIPVLLIGLGRIASLLEKDSFRNRPCTHAGTFFSPWGKKKFFLVGAIDPSEDRRNRFCKD
CCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCC
WNIPKNLCFIDFKNWASSFYSSQSKKDPAIVSPNNRSEYDGKTRRRNFSGTQFVRQEGRD
CCCCCCEEEEECHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHHCCCCHHHHHHHCCCC
LADFKNVHSVDLRRKKKDHNSCDSNPNSIDPTFCLVVIATPSETHYQLAKAAIEFGFRHL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHH
LVEKPVCHSLPLARKLAELCRKTGTDLRVNHERRYHPLYIQVRKWIQEETYGPVRTIRAS
HHCCCHHHCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
VLTSARNPGRAILDKTGPLFHDGTHAVDLLTWYLGMPDRVVSILRSYPNSPVEEQALALM
HHHHCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHEEEE
TYPKGETVFLEAGGMRNYFQFELDIQTENARFLVGNDEVRFWKSKPSRKYKGFKSLTPVS
ECCCCCEEEEECCCCCCEEEEEEEEEECCCEEEECCCCEEEECCCCCHHHCCCCCCCCCC
IPEKSSAGSNPFLNLYDSLFRHLSGKSSRVTGDMEENLQILTLLDTIRRRAEKRFLGV
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]