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The map label for this gene is 116327564

Identifier: 116327564

GI number: 116327564

Start: 905858

End: 907513

Strand: Reverse

Name: 116327564

Synonym: LBL_0794

Alternate gene names: NA

Gene position: 907513-905858 (Counterclockwise)

Preceding gene: 116327566

Following gene: 116327562

Centisome position: 25.11

GC content: 38.47

Gene sequence:

>1656_bases
ATGGAGCACAAAAAGGAAAGTACTTATGAAAAATTCGGAACTTTTTTTATTTTAGGAATCATTTTTTTTGCGACGATTCA
ACCTACGGTTGGAGAGGACCTTCTACCTAAGGAAGTTATTTTAGAAGAAGAAAAAGGGAATCCCGGAAATTTCAAAAATG
TACTTCACCTGACTCTGAAAGACGCAGTGAATCATGTACTCGAAAAGAACATTACGATTCAAAACGCGAAGATGGAGTAC
GTAAAAGCGGACGGAGGAGAACTCAAAAACGAATCCCAATTTACTTGGAATCTGATCGGTGGAATCACTATTTTTAAAAC
GACTCTTCCCAACAATAGAAACAACATCTTTTTAGGAACCAAACAAAGCCAAGATAAACTCAGCGTAGGTATCGAAAAAA
ATTTTAAAACAGGAACTTATATGAAATTGGAAGCGAGCACTACTCGTTTCGATTCAAGCGCCTTCGAAGATCCTCGTACA
ACTCCTTCAAGCTTAGCTATACTCGCCATTCCTCCGCAATATACGAGCGCTTTGACGATCACTCTTAGTCAGGAAATTTT
AAAGTACAGTTTCGGAAAAACTCAGAAAGAAAGAGAAGCCATTTTAAGACAAAACACGGTAATCAAAAGAGAAGAGCTGA
TTTATATTCTTTCCCAACTTGTGGTTCAAACCTTGATTCAATACTGGAGTTTGAATATTTACGATTCGAACGTAAAAACT
TTACAAGATCTAGAATCCAACACGAGAAACATACGCGACTTAACCACAAGAAAACGGAATTTAGGCCTCTCCGAAGGTTT
TGAAGTCAACCTTTGGAACTCCATGCTTTCCCAAACCGCCGGAAATTTAGAAAAGGCCAAGGTTTCCCGTAAAGAGGCGG
AAAGAAATTTGATTCGAATTTTAAACGCCGATCCGTCCTCTAAAATCGAAGGTGTTACCGACCTTCAAGAGAATATTCCG
ACGGATTTTAACGTGGAAAAAGATTATATCTACGCTTTAGAACATAGAACCGATTTGAAAAATCTTCGGAAACAAAGGGA
AATTGCAGAACTCAATTTAAAAATCAAAGAGGCCGAAGACATGCCTTCTTTGAAACTTTCAGGCGCCTATTCCACAAGGG
GGCAAAATATCGTTTCTCCCCAACAAAATGTCATGGATACAAATCGAGGAATTGCTTCCTTTAAATATCCGGAAGCGTAT
GCGGGTTTTCAGTTTTCTTATCCGCTTTGGGATAAAGGCATCAAAGTGGATATCCGGAACGCGAAGTTGGATGTGGAAAA
TTTAGAAAAAAAAGAAGCGGAATTGAAACTTTCCATCAAAGAAGAATTAGAAAATCGTTATGCGACGATCTTAGCCGGAA
AAGATATTCTCGAAGGCGCTAAAAAAAGAAGGGAAGAAGCAAATAAATTCTACAGAGGTCTTTCAGAACGTTTTCGTCAG
GGAAGATTTACCGCAGTCGCAGTAAAAATCGCGTTGGATAACGTAATCCAATCCGAATTACAAGTAGCTCAAGCTAAAAT
TCAACTGAACATAGATATTCTTCGTTACGAACTCGCAAAGAACCATATCTTCGAAAAATTCGGCGTGAATGTCAACGATA
TCATCGATCGATTGATGAAGATGACGGACACAAAACAAACAGATCTGAAGTTTTAG

Upstream 100 bases:

>100_bases
TGAATTGCATTGAATTACTCTCTTTTAGACTCATAAAATCTATTTTTCGATTTCTAAAAATCTTCCTAATTCTAACTATG
TCCACTAAGTGAGCGCCTAC

Downstream 100 bases:

>100_bases
AACAACCCCAAAACGAAAAAGTCTCATGTACCACGCAGAAGTATAAGATAGTCTATTATAATTTTATAATACTTTGTTTT
TCTAATCAACCAACGCGAGT

Product: TolC-like outer membrane efflux protein

Products: NA

Alternate protein names: LC-Like Outer Membrane Efflux Protein; Cytoplasmic Membrane Protein

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MEHKKESTYEKFGTFFILGIIFFATIQPTVGEDLLPKEVILEEEKGNPGNFKNVLHLTLKDAVNHVLEKNITIQNAKMEY
VKADGGELKNESQFTWNLIGGITIFKTTLPNNRNNIFLGTKQSQDKLSVGIEKNFKTGTYMKLEASTTRFDSSAFEDPRT
TPSSLAILAIPPQYTSALTITLSQEILKYSFGKTQKEREAILRQNTVIKREELIYILSQLVVQTLIQYWSLNIYDSNVKT
LQDLESNTRNIRDLTTRKRNLGLSEGFEVNLWNSMLSQTAGNLEKAKVSRKEAERNLIRILNADPSSKIEGVTDLQENIP
TDFNVEKDYIYALEHRTDLKNLRKQREIAELNLKIKEAEDMPSLKLSGAYSTRGQNIVSPQQNVMDTNRGIASFKYPEAY
AGFQFSYPLWDKGIKVDIRNAKLDVENLEKKEAELKLSIKEELENRYATILAGKDILEGAKKRREEANKFYRGLSERFRQ
GRFTAVAVKIALDNVIQSELQVAQAKIQLNIDILRYELAKNHIFEKFGVNVNDIIDRLMKMTDTKQTDLKF

Sequences:

>Translated_551_residues
MEHKKESTYEKFGTFFILGIIFFATIQPTVGEDLLPKEVILEEEKGNPGNFKNVLHLTLKDAVNHVLEKNITIQNAKMEY
VKADGGELKNESQFTWNLIGGITIFKTTLPNNRNNIFLGTKQSQDKLSVGIEKNFKTGTYMKLEASTTRFDSSAFEDPRT
TPSSLAILAIPPQYTSALTITLSQEILKYSFGKTQKEREAILRQNTVIKREELIYILSQLVVQTLIQYWSLNIYDSNVKT
LQDLESNTRNIRDLTTRKRNLGLSEGFEVNLWNSMLSQTAGNLEKAKVSRKEAERNLIRILNADPSSKIEGVTDLQENIP
TDFNVEKDYIYALEHRTDLKNLRKQREIAELNLKIKEAEDMPSLKLSGAYSTRGQNIVSPQQNVMDTNRGIASFKYPEAY
AGFQFSYPLWDKGIKVDIRNAKLDVENLEKKEAELKLSIKEELENRYATILAGKDILEGAKKRREEANKFYRGLSERFRQ
GRFTAVAVKIALDNVIQSELQVAQAKIQLNIDILRYELAKNHIFEKFGVNVNDIIDRLMKMTDTKQTDLKF
>Mature_551_residues
MEHKKESTYEKFGTFFILGIIFFATIQPTVGEDLLPKEVILEEEKGNPGNFKNVLHLTLKDAVNHVLEKNITIQNAKMEY
VKADGGELKNESQFTWNLIGGITIFKTTLPNNRNNIFLGTKQSQDKLSVGIEKNFKTGTYMKLEASTTRFDSSAFEDPRT
TPSSLAILAIPPQYTSALTITLSQEILKYSFGKTQKEREAILRQNTVIKREELIYILSQLVVQTLIQYWSLNIYDSNVKT
LQDLESNTRNIRDLTTRKRNLGLSEGFEVNLWNSMLSQTAGNLEKAKVSRKEAERNLIRILNADPSSKIEGVTDLQENIP
TDFNVEKDYIYALEHRTDLKNLRKQREIAELNLKIKEAEDMPSLKLSGAYSTRGQNIVSPQQNVMDTNRGIASFKYPEAY
AGFQFSYPLWDKGIKVDIRNAKLDVENLEKKEAELKLSIKEELENRYATILAGKDILEGAKKRREEANKFYRGLSERFRQ
GRFTAVAVKIALDNVIQSELQVAQAKIQLNIDILRYELAKNHIFEKFGVNVNDIIDRLMKMTDTKQTDLKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63092; Mature: 63092

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHKKESTYEKFGTFFILGIIFFATIQPTVGEDLLPKEVILEEEKGNPGNFKNVLHLTLK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEECCCCCCCCHHHHHHHHHH
DAVNHVLEKNITIQNAKMEYVKADGGELKNESQFTWNLIGGITIFKTTLPNNRNNIFLGT
HHHHHHHHCCCEEECCEEEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCCCCEEEEEC
KQSQDKLSVGIEKNFKTGTYMKLEASTTRFDSSAFEDPRTTPSSLAILAIPPQYTSALTI
CCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEE
TLSQEILKYSFGKTQKEREAILRQNTVIKREELIYILSQLVVQTLIQYWSLNIYDSNVKT
EEHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHH
LQDLESNTRNIRDLTTRKRNLGLSEGFEVNLWNSMLSQTAGNLEKAKVSRKEAERNLIRI
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHEE
LNADPSSKIEGVTDLQENIPTDFNVEKDYIYALEHRTDLKNLRKQREIAELNLKIKEAED
ECCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCEEEECCCC
MPSLKLSGAYSTRGQNIVSPQQNVMDTNRGIASFKYPEAYAGFQFSYPLWDKGIKVDIRN
CCCEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHCCCEECCCCCCCCCEEEEEC
AKLDVENLEKKEAELKLSIKEELENRYATILAGKDILEGAKKRREEANKFYRGLSERFRQ
CEECHHHHHHHHHHEEEEHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHC
GRFTAVAVKIALDNVIQSELQVAQAKIQLNIDILRYELAKNHIFEKFGVNVNDIIDRLMK
CCEEEEEEHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
MTDTKQTDLKF
HHCCCCCCCCC
>Mature Secondary Structure
MEHKKESTYEKFGTFFILGIIFFATIQPTVGEDLLPKEVILEEEKGNPGNFKNVLHLTLK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEECCCCCCCCHHHHHHHHHH
DAVNHVLEKNITIQNAKMEYVKADGGELKNESQFTWNLIGGITIFKTTLPNNRNNIFLGT
HHHHHHHHCCCEEECCEEEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCCCCEEEEEC
KQSQDKLSVGIEKNFKTGTYMKLEASTTRFDSSAFEDPRTTPSSLAILAIPPQYTSALTI
CCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEE
TLSQEILKYSFGKTQKEREAILRQNTVIKREELIYILSQLVVQTLIQYWSLNIYDSNVKT
EEHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHH
LQDLESNTRNIRDLTTRKRNLGLSEGFEVNLWNSMLSQTAGNLEKAKVSRKEAERNLIRI
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHEE
LNADPSSKIEGVTDLQENIPTDFNVEKDYIYALEHRTDLKNLRKQREIAELNLKIKEAED
ECCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCEEEECCCC
MPSLKLSGAYSTRGQNIVSPQQNVMDTNRGIASFKYPEAYAGFQFSYPLWDKGIKVDIRN
CCCEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHCCCEECCCCCCCCCEEEEEC
AKLDVENLEKKEAELKLSIKEELENRYATILAGKDILEGAKKRREEANKFYRGLSERFRQ
CEECHHHHHHHHHHEEEEHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHC
GRFTAVAVKIALDNVIQSELQVAQAKIQLNIDILRYELAKNHIFEKFGVNVNDIIDRLMK
CCEEEEEEHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
MTDTKQTDLKF
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA