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The map label for this gene is eftB [H]

Identifier: 116327463

GI number: 116327463

Start: 761398

End: 762159

Strand: Reverse

Name: eftB [H]

Synonym: LBL_0680

Alternate gene names: 116327463

Gene position: 762159-761398 (Counterclockwise)

Preceding gene: 116327464

Following gene: 116327462

Centisome position: 21.09

GC content: 44.88

Gene sequence:

>762_bases
ATGAAAATCATCGTATTAGTGAAACAGGTACCTGACACCGAAACCAGTATCAAAGTAGGAGATAAATCCATCAATGAAGC
CGGAATCAAATGGATTATTTCTCCCTATGATGAATTTGCCATCGAGGAAGGAATCAGATTACGTGAAAAACACGGTGGCG
AAGTAATCGCCGTTTCCCTTGGACCGGACAGAGTCGTAGAAGCTCTTAGAACCGCTTATGCAATGGGAGCCGACCGCGCG
GTTCATATCAAAGTCGATAATTACGTTCCTTTTGACACGAACAATACTGCGGAACTGATCGCAAATTTCGCAAAAACCGA
AAACGCAGACGTAATCATCGGTGGAAGACAATCTATTGACACCGATTCTTCTCAGGTAGTAGTTCAAGTCGCGGAATTTC
TCGGAATTCCTCATATCGCATTTGCAGTCAACCTTGAAATCAGCGGAACCGTGGTCAAAGCCACCAAAGAAGTAGAAGGT
GGAACTCAAACTGTCGAAACTTCCACTCCCGTAGCTCTCACTGCACAAAAAGGATTAAACGAACCTCGTTATCCTTCTCT
CAAAGGAATCATGACCGCTAAGAAAAAACCGGTGGAAACGAAATCGGTTGCGGACCTCGGAAGTCCCGCTAGTAAAATCG
AAGTTGTAGGACTCGAACCTCCTCCTCCAAGAATTCCAGGTAGAAAACTGGAAGCGGCAGATGCAAACGGTTTTGCATCC
CAACTCGTAAAAGCTCTCAGAGAAGAAGCTAAGGTCATATAA

Upstream 100 bases:

>100_bases
CGAATGAGCCCATTTAGAACGGTTTAAAAAAGTGGTTTGCACGACATAGACACAAGATTTTTGTGTTTAACAGCACTAAT
TTTTTTGGAGTACCCATTGA

Downstream 100 bases:

>100_bases
GGAGAACACCCAGTGAGCAACGTATTAATTGTTGGCGAATTGAAAGATGGAGACTTGAAAAAAATCTCCAGAGAAATCAC
TTCAGCGGGTAGAAAAATCG

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKIIVLVKQVPDTETSIKVGDKSINEAGIKWIISPYDEFAIEEGIRLREKHGGEVIAVSLGPDRVVEALRTAYAMGADRA
VHIKVDNYVPFDTNNTAELIANFAKTENADVIIGGRQSIDTDSSQVVVQVAEFLGIPHIAFAVNLEISGTVVKATKEVEG
GTQTVETSTPVALTAQKGLNEPRYPSLKGIMTAKKKPVETKSVADLGSPASKIEVVGLEPPPPRIPGRKLEAADANGFAS
QLVKALREEAKVI

Sequences:

>Translated_253_residues
MKIIVLVKQVPDTETSIKVGDKSINEAGIKWIISPYDEFAIEEGIRLREKHGGEVIAVSLGPDRVVEALRTAYAMGADRA
VHIKVDNYVPFDTNNTAELIANFAKTENADVIIGGRQSIDTDSSQVVVQVAEFLGIPHIAFAVNLEISGTVVKATKEVEG
GTQTVETSTPVALTAQKGLNEPRYPSLKGIMTAKKKPVETKSVADLGSPASKIEVVGLEPPPPRIPGRKLEAADANGFAS
QLVKALREEAKVI
>Mature_253_residues
MKIIVLVKQVPDTETSIKVGDKSINEAGIKWIISPYDEFAIEEGIRLREKHGGEVIAVSLGPDRVVEALRTAYAMGADRA
VHIKVDNYVPFDTNNTAELIANFAKTENADVIIGGRQSIDTDSSQVVVQVAEFLGIPHIAFAVNLEISGTVVKATKEVEG
GTQTVETSTPVALTAQKGLNEPRYPSLKGIMTAKKKPVETKSVADLGSPASKIEVVGLEPPPPRIPGRKLEAADANGFAS
QLVKALREEAKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=243, Percent_Identity=38.2716049382716, Blast_Score=154, Evalue=5e-38,
Organism=Homo sapiens, GI62420877, Length=232, Percent_Identity=38.3620689655172, Blast_Score=147, Evalue=6e-36,
Organism=Escherichia coli, GI87081682, Length=216, Percent_Identity=30.0925925925926, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI2367123, Length=229, Percent_Identity=26.6375545851528, Blast_Score=67, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI25141345, Length=262, Percent_Identity=36.6412213740458, Blast_Score=138, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6321646, Length=261, Percent_Identity=31.0344827586207, Blast_Score=109, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24651147, Length=247, Percent_Identity=38.4615384615385, Blast_Score=145, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24651145, Length=247, Percent_Identity=38.4615384615385, Blast_Score=145, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27075; Mature: 27075

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIVLVKQVPDTETSIKVGDKSINEAGIKWIISPYDEFAIEEGIRLREKHGGEVIAVSL
CEEEEEEEECCCCCCEEEECCCCCCCCCCEEEECCHHHHHHHHCCHHHHCCCCCEEEEEC
GPDRVVEALRTAYAMGADRAVHIKVDNYVPFDTNNTAELIANFAKTENADVIIGGRQSID
CHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCHHHHHHHHHCCCCCEEEECCCCCCC
TDSSQVVVQVAEFLGIPHIAFAVNLEISGTVVKATKEVEGGTQTVETSTPVALTAQKGLN
CCCHHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEHHCCCCCEEEECCCCEEEEHHHCCC
EPRYPSLKGIMTAKKKPVETKSVADLGSPASKIEVVGLEPPPPRIPGRKLEAADANGFAS
CCCCCCCHHHHHCCCCCCCHHHHHHCCCCCHHEEEEECCCCCCCCCCCEEECCCCCHHHH
QLVKALREEAKVI
HHHHHHHHHHCCC
>Mature Secondary Structure
MKIIVLVKQVPDTETSIKVGDKSINEAGIKWIISPYDEFAIEEGIRLREKHGGEVIAVSL
CEEEEEEEECCCCCCEEEECCCCCCCCCCEEEECCHHHHHHHHCCHHHHCCCCCEEEEEC
GPDRVVEALRTAYAMGADRAVHIKVDNYVPFDTNNTAELIANFAKTENADVIIGGRQSID
CHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCHHHHHHHHHCCCCCEEEECCCCCCC
TDSSQVVVQVAEFLGIPHIAFAVNLEISGTVVKATKEVEGGTQTVETSTPVALTAQKGLN
CCCHHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEHHCCCCCEEEECCCCEEEEHHHCCC
EPRYPSLKGIMTAKKKPVETKSVADLGSPASKIEVVGLEPPPPRIPGRKLEAADANGFAS
CCCCCCCHHHHHCCCCCCCHHHHHHCCCCCHHEEEEECCCCCCCCCCCEEECCCCCHHHH
QLVKALREEAKVI
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]