Click here to switch to the map view.

The map label for this gene is yceA [C]

Identifier: 116327457

GI number: 116327457

Start: 752721

End: 753824

Strand: Reverse

Name: yceA [C]

Synonym: LBL_0674

Alternate gene names: 116327457

Gene position: 753824-752721 (Counterclockwise)

Preceding gene: 116327459

Following gene: 116327448

Centisome position: 20.86

GC content: 41.12

Gene sequence:

>1104_bases
ATGGCAAATCGGGGCGATCTTCAAAAAAAGACCCACACTAAAAAACGTCCTCTCCACAATATCTACGGGAAGGAGATTCT
GAGCAAACGTCTCGAGGCTGAAAACTTTCCAAGAACGACTCTTTCCTTTTATCGTTATGTCATTTTAGAAAACGTGCAAG
AACTCAGGAATCGACTTTATGTGGAATGGGAAGCTCTCGGAGTTCTGGGAAGAATCTACGTAGCAAGAGAAGGAATCAAC
GCCCAACTTTCAATTCCTTCTCACAATCTGAATTCTTTTAAGGAGAATTTGAATTCCAGAATTCAATTCAAGGATATGCT
TTTAAAAATCGCCGTGGAGGACGATCATAGATCCTTTTTAAAACTTGATTTAAAAGTGCGGAATAAAATTGTCGCGGATG
GATTGAATGACGACGCATTCGACGTGACTAATGTTGGAAAACACCTTTCCGCAGAAGAATTCAATCGTTGCATGGAGGAT
AAAAATTCCATCGTAGTCGACGTAAGAAATCATTATGAGAGTGAAATCGGTCATTTTGAAAACGCCATTCTTCCACAATC
GGACACCTTCCGGGAAGAACTTCAAATCCTACTGGAGTTGTTAAATGGGAAAGAAGATCATAAAATCCTAATGTACTGCA
CGGGAGGAATCCGTTGTGAAAAAGCAAGCGCTTGGCTCAAACATCACGGATTCAAGGACGTCAATCAACTTCACGGCGGA
ATCATCTCTTACGCACACGAAATTTCTCAAAAAGGACTAGAATCCAAATTTAGAGGAAAAAATTTCGTATTCGACGGGCG
CCTTCAAGAAACAATCGGAAACGAGATAATTTCCGTTTGCCATCAGTGCGGAAAGAAAAGCGATCGTCACATAAACTGTT
CAAACCCCGGATGTCATATTCTTTTTATCCAGTGTGACGACTGTTCCGAAAAATTCGAAGGATGTTGCACGGAAGAATGC
AAAACCGTCTTACATCTCCCGAAAGAAAAACAAAAGGAGATCCGAAAAGGAAAATCGAACGAAAATCGTTTCTTTACAAA
GTCGAAAATCCGTCCGAAAATTTCGGAACTCTACCGGAACCGAAAGCCTTTCGAAACCGCCTGA

Upstream 100 bases:

>100_bases
TTAAAACATCGAGTCAAAAAGAAGAGAATCCGTGCCCCGAAAGGTAAACCCCGTAAGAAAGACTTGTCAAGAAAAGTCTC
CATTTCAAAGTTAAGAATGT

Downstream 100 bases:

>100_bases
ACTTTTAAAAAGGAATTCTCCTTCTAGACCAAAACCAAGCGAGACTTACACCGGCAAGCCCGTGCCAGATCCCCCAAACT
GCCGCAATGATCGCCATACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MANRGDLQKKTHTKKRPLHNIYGKEILSKRLEAENFPRTTLSFYRYVILENVQELRNRLYVEWEALGVLGRIYVAREGIN
AQLSIPSHNLNSFKENLNSRIQFKDMLLKIAVEDDHRSFLKLDLKVRNKIVADGLNDDAFDVTNVGKHLSAEEFNRCMED
KNSIVVDVRNHYESEIGHFENAILPQSDTFREELQILLELLNGKEDHKILMYCTGGIRCEKASAWLKHHGFKDVNQLHGG
IISYAHEISQKGLESKFRGKNFVFDGRLQETIGNEIISVCHQCGKKSDRHINCSNPGCHILFIQCDDCSEKFEGCCTEEC
KTVLHLPKEKQKEIRKGKSNENRFFTKSKIRPKISELYRNRKPFETA

Sequences:

>Translated_367_residues
MANRGDLQKKTHTKKRPLHNIYGKEILSKRLEAENFPRTTLSFYRYVILENVQELRNRLYVEWEALGVLGRIYVAREGIN
AQLSIPSHNLNSFKENLNSRIQFKDMLLKIAVEDDHRSFLKLDLKVRNKIVADGLNDDAFDVTNVGKHLSAEEFNRCMED
KNSIVVDVRNHYESEIGHFENAILPQSDTFREELQILLELLNGKEDHKILMYCTGGIRCEKASAWLKHHGFKDVNQLHGG
IISYAHEISQKGLESKFRGKNFVFDGRLQETIGNEIISVCHQCGKKSDRHINCSNPGCHILFIQCDDCSEKFEGCCTEEC
KTVLHLPKEKQKEIRKGKSNENRFFTKSKIRPKISELYRNRKPFETA
>Mature_366_residues
ANRGDLQKKTHTKKRPLHNIYGKEILSKRLEAENFPRTTLSFYRYVILENVQELRNRLYVEWEALGVLGRIYVAREGINA
QLSIPSHNLNSFKENLNSRIQFKDMLLKIAVEDDHRSFLKLDLKVRNKIVADGLNDDAFDVTNVGKHLSAEEFNRCMEDK
NSIVVDVRNHYESEIGHFENAILPQSDTFREELQILLELLNGKEDHKILMYCTGGIRCEKASAWLKHHGFKDVNQLHGGI
ISYAHEISQKGLESKFRGKNFVFDGRLQETIGNEIISVCHQCGKKSDRHINCSNPGCHILFIQCDDCSEKFEGCCTEECK
TVLHLPKEKQKEIRKGKSNENRFFTKSKIRPKISELYRNRKPFETA

Specific function: Unknown. [C]

COG id: COG1054

COG function: function code R; Predicted sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain

Homologues:

Organism=Homo sapiens, GI111038120, Length=296, Percent_Identity=32.4324324324324, Blast_Score=137, Evalue=2e-32,
Organism=Escherichia coli, GI1787294, Length=335, Percent_Identity=49.2537313432836, Blast_Score=353, Evalue=7e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2438_LEPBJ (Q04QD0)

Other databases:

- EMBL:   CP000350
- RefSeq:   YP_801648.1
- ProteinModelPortal:   Q04QD0
- STRING:   Q04QD0
- GeneID:   4411929
- GenomeReviews:   CP000350_GR
- KEGG:   lbj:LBJ_2438
- eggNOG:   COG1054
- HOGENOM:   HBG366219
- OMA:   FDNALDY
- PhylomeDB:   Q04QD0
- ProtClustDB:   PRK00142
- BioCyc:   LBOR355277:LBJ_2438-MONOMER
- HAMAP:   MF_00469
- InterPro:   IPR001763
- InterPro:   IPR020936
- Gene3D:   G3DSA:3.40.250.10
- SMART:   SM00450

Pfam domain/function: PF00581 Rhodanese; SSF52821 Rhodanese-like

EC number: NA

Molecular weight: Translated: 42523; Mature: 42392

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: PS50206 RHODANESE_3

Important sites: ACT_SITE 213-213

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANRGDLQKKTHTKKRPLHNIYGKEILSKRLEAENFPRTTLSFYRYVILENVQELRNRLY
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHE
VEWEALGVLGRIYVAREGINAQLSIPSHNLNSFKENLNSRIQFKDMLLKIAVEDDHRSFL
EHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCHHHHHHHHEEEEECCCCHHHH
KLDLKVRNKIVADGLNDDAFDVTNVGKHLSAEEFNRCMEDKNSIVVDVRNHYESEIGHFE
HHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHH
NAILPQSDTFREELQILLELLNGKEDHKILMYCTGGIRCEKASAWLKHHGFKDVNQLHGG
HCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHCCCHHHHHHHHH
IISYAHEISQKGLESKFRGKNFVFDGRLQETIGNEIISVCHQCGKKSDRHINCSNPGCHI
HHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEE
LFIQCDDCSEKFEGCCTEECKTVLHLPKEKQKEIRKGKSNENRFFTKSKIRPKISELYRN
EEEEECCHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEHHHCCHHHHHHHCC
RKPFETA
CCCCCCC
>Mature Secondary Structure 
ANRGDLQKKTHTKKRPLHNIYGKEILSKRLEAENFPRTTLSFYRYVILENVQELRNRLY
CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHE
VEWEALGVLGRIYVAREGINAQLSIPSHNLNSFKENLNSRIQFKDMLLKIAVEDDHRSFL
EHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCHHHHHHHHEEEEECCCCHHHH
KLDLKVRNKIVADGLNDDAFDVTNVGKHLSAEEFNRCMEDKNSIVVDVRNHYESEIGHFE
HHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHH
NAILPQSDTFREELQILLELLNGKEDHKILMYCTGGIRCEKASAWLKHHGFKDVNQLHGG
HCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHCCCHHHHHHHHH
IISYAHEISQKGLESKFRGKNFVFDGRLQETIGNEIISVCHQCGKKSDRHINCSNPGCHI
HHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEE
LFIQCDDCSEKFEGCCTEECKTVLHLPKEKQKEIRKGKSNENRFFTKSKIRPKISELYRN
EEEEECCHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEHHHCCHHHHHHHCC
RKPFETA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA