Click here to switch to the map view.

The map label for this gene is ygcJ [H]

Identifier: 116327445

GI number: 116327445

Start: 735834

End: 736907

Strand: Reverse

Name: ygcJ [H]

Synonym: LBL_0661

Alternate gene names: 116327445

Gene position: 736907-735834 (Counterclockwise)

Preceding gene: 116327446

Following gene: 116327444

Centisome position: 20.39

GC content: 43.48

Gene sequence:

>1074_bases
ATGAACCGTTTCATTCAATTTCATTTCCTCACTTCCTACCCCCCTTCCAACTTGAACCGGGACGATTTAGGAAGACCTAA
AACCGCAATGCTGGGAGGGGCGAATAGGCTTCGTATTTCCTCTCAAAGTTTAAAAAGGGCCTGGAGAACTTCGGATCTTT
TTCGGGAAACGTTATCCGGCCATATCGGAACGAGAACCAAAGAGAAAGGAAAAGAAATCTATCAGAAATTATTGGATGGA
AAGATTCCCGAAAAAAACGCAAGAACCTGGAGCAAATCGATCGCGGGTAGATTCGGAAAACTTAAAAATCCTTCGGAAAA
AGAATTGGAAAAAAATCCGCTTTTGGATCTGGAGATCCAACAACTCACTCATTTCAGCAAAGAGGAGAACGAGGCGATTT
CCTCCTTAATCCAAAAACTGATCGATTCCAAAAAAGAACCCTCCAACGAGGATTTGAATCTTTTGAAAAAGGAAAATTCC
TCTTCGGATATCGCCATGTTCGGTAGAATGCTCGCCTCCGACCCCGCGTTTAACATCGAAGCGGCCGTTCAAGTCGCCCA
CGCGATTACGGTTCACAAGGTTGCCATCGAAGACGATTTTTTTACGGCAGTCGACGACTTAAACAGCGGAATCGAAGACG
TAGGAGCCGGTCATTTAGGAGAAGTGGAATTCGGTTCCGGTCTTTTTTATCTTTATATCTGCGTCAATAGAGAACAACTT
CTTAACAATCTGAACGGTAATAAGGATCTCGCCAAACGTACGATAAAAGCGTTAGTCGAAACATCATCTACGATTTCTCC
CACGGGAAAACAAAACAGTTTCGCTTCCAGAGTGAGAGCTTTGTACTGTATGGCGGAAAAGGGAAACGAACAACCCAGAT
CTCTACATACCGCGTTTCTAAACTCCGTGGAAGATAGAGGAATTTTGAATGCGGCGATTTTGAAATTGGAATCCAGTAGA
CAAAACTTCGAAAAAGTATACGGCTCCTGTGCTTCCGGGGGTTTTAAAACTTTCAACGTGGACTCCGGCAACGGCTCCTT
AAAAGAAATATTAGAATTTGCTCAAGAGGATTAG

Upstream 100 bases:

>100_bases
GGAATCAAAGAACCAAAAAAGACTGGGCTTACGATTATTACGGAACCCCAATAAGCGAAAACAACCTCGAAAATTCAGAA
AACCCACAAGGAGAAAATCA

Downstream 100 bases:

>100_bases
ATGAAAGATTATTTGGTTTTTCGCCTCTACGGTCCTCTCGTTTCTTGGGGAAATATCGCAGTCGGCGAATATCGTCCCAG
CGATTCTTTTCCGACTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNRFIQFHFLTSYPPSNLNRDDLGRPKTAMLGGANRLRISSQSLKRAWRTSDLFRETLSGHIGTRTKEKGKEIYQKLLDG
KIPEKNARTWSKSIAGRFGKLKNPSEKELEKNPLLDLEIQQLTHFSKEENEAISSLIQKLIDSKKEPSNEDLNLLKKENS
SSDIAMFGRMLASDPAFNIEAAVQVAHAITVHKVAIEDDFFTAVDDLNSGIEDVGAGHLGEVEFGSGLFYLYICVNREQL
LNNLNGNKDLAKRTIKALVETSSTISPTGKQNSFASRVRALYCMAEKGNEQPRSLHTAFLNSVEDRGILNAAILKLESSR
QNFEKVYGSCASGGFKTFNVDSGNGSLKEILEFAQED

Sequences:

>Translated_357_residues
MNRFIQFHFLTSYPPSNLNRDDLGRPKTAMLGGANRLRISSQSLKRAWRTSDLFRETLSGHIGTRTKEKGKEIYQKLLDG
KIPEKNARTWSKSIAGRFGKLKNPSEKELEKNPLLDLEIQQLTHFSKEENEAISSLIQKLIDSKKEPSNEDLNLLKKENS
SSDIAMFGRMLASDPAFNIEAAVQVAHAITVHKVAIEDDFFTAVDDLNSGIEDVGAGHLGEVEFGSGLFYLYICVNREQL
LNNLNGNKDLAKRTIKALVETSSTISPTGKQNSFASRVRALYCMAEKGNEQPRSLHTAFLNSVEDRGILNAAILKLESSR
QNFEKVYGSCASGGFKTFNVDSGNGSLKEILEFAQED
>Mature_357_residues
MNRFIQFHFLTSYPPSNLNRDDLGRPKTAMLGGANRLRISSQSLKRAWRTSDLFRETLSGHIGTRTKEKGKEIYQKLLDG
KIPEKNARTWSKSIAGRFGKLKNPSEKELEKNPLLDLEIQQLTHFSKEENEAISSLIQKLIDSKKEPSNEDLNLLKKENS
SSDIAMFGRMLASDPAFNIEAAVQVAHAITVHKVAIEDDFFTAVDDLNSGIEDVGAGHLGEVEFGSGLFYLYICVNREQL
LNNLNGNKDLAKRTIKALVETSSTISPTGKQNSFASRVRALYCMAEKGNEQPRSLHTAFLNSVEDRGILNAAILKLESSR
QNFEKVYGSCASGGFKTFNVDSGNGSLKEILEFAQED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789116, Length=365, Percent_Identity=31.2328767123288, Blast_Score=133, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010148 [H]

Pfam domain/function: PF09344 Cas_CT1975 [H]

EC number: NA

Molecular weight: Translated: 39737; Mature: 39737

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFIQFHFLTSYPPSNLNRDDLGRPKTAMLGGANRLRISSQSLKRAWRTSDLFRETLSG
CCCEEEEEEEECCCCCCCCHHHCCCCCHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHCC
HIGTRTKEKGKEIYQKLLDGKIPEKNARTWSKSIAGRFGKLKNPSEKELEKNPLLDLEIQ
CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEHH
QLTHFSKEENEAISSLIQKLIDSKKEPSNEDLNLLKKENSSSDIAMFGRMLASDPAFNIE
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCHH
AAVQVAHAITVHKVAIEDDFFTAVDDLNSGIEDVGAGHLGEVEFGSGLFYLYICVNREQL
HHHHHHHHHHHHHEEECCHHHHHHHHHHCCHHHHCCCCCCCEECCCCEEEEEEEECHHHH
LNNLNGNKDLAKRTIKALVETSSTISPTGKQNSFASRVRALYCMAEKGNEQPRSLHTAFL
HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
NSVEDRGILNAAILKLESSRQNFEKVYGSCASGGFKTFNVDSGNGSLKEILEFAQED
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MNRFIQFHFLTSYPPSNLNRDDLGRPKTAMLGGANRLRISSQSLKRAWRTSDLFRETLSG
CCCEEEEEEEECCCCCCCCHHHCCCCCHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHCC
HIGTRTKEKGKEIYQKLLDGKIPEKNARTWSKSIAGRFGKLKNPSEKELEKNPLLDLEIQ
CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEHH
QLTHFSKEENEAISSLIQKLIDSKKEPSNEDLNLLKKENSSSDIAMFGRMLASDPAFNIE
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCHH
AAVQVAHAITVHKVAIEDDFFTAVDDLNSGIEDVGAGHLGEVEFGSGLFYLYICVNREQL
HHHHHHHHHHHHHEEECCHHHHHHHHHHCCHHHHCCCCCCCEECCCCEEEEEEEECHHHH
LNNLNGNKDLAKRTIKALVETSSTISPTGKQNSFASRVRALYCMAEKGNEQPRSLHTAFL
HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
NSVEDRGILNAAILKLESSRQNFEKVYGSCASGGFKTFNVDSGNGSLKEILEFAQED
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]