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The map label for this gene is ychA [C]

Identifier: 116327302

GI number: 116327302

Start: 541590

End: 542525

Strand: Reverse

Name: ychA [C]

Synonym: LBL_0492

Alternate gene names: 116327302

Gene position: 542525-541590 (Counterclockwise)

Preceding gene: 116327303

Following gene: 116327301

Centisome position: 15.01

GC content: 39.64

Gene sequence:

>936_bases
TTGACTCATTTCGTTTTTCGTAAAAATATATTTTTTATGTCTTTGTCCGATTCTTACCACGACTCTTTCCACCTTCCATC
CGACAAACTCGAAGGAAAATTTTATCAACTTGAATTCTCCGGTACCGAAGAAAAAATCAGAGTGATTCGCGAGATCGCGG
ATATGATCCCTTGGCAATTTGAAATCGACGAATTCATAGAAGAGTTTAAGGATCCTACATTGAGGATCTTTGCCCGTTCT
ATTTCCTCCATTGTTCATATGGAGCGTATCAATACACGTTACTCTCTTCTTGCAGACAAAGGCCACGTCAACGATTACGG
AGATTTGGAAGAAGCGGTATTTCTTCTTTCCAGTGTCGGAGACCCGAAAGCGTCTTATCACGAATTCAAAATCTATTTGG
ACAAACTTGCTCTAAGAGTGGAAGAATTATACGATCTCAACCCAGAATATGTTTCCGAAGAATTGAAAGTTCATTTCTTA
ACAAGAGTACTTTCTTCGGAAGAAAATTTTCAAGGAAACAACGATCAATACGACGATCCGAATAATTCTTTCGTGACTCG
TATCGTTCATACGCGAAAAGGAATCCCGATTTCTCTCTCCACGATCTATCTTCTGGTCGCAAAAAGACTTTCTCTTCCTC
TTTACGGAGTGAATATGCCCCTTCATTTTCTTCTTCACTTCGATTCCCCGGATTACGAAACTTTCATCGATCCATTTCAT
GGGGGAGTTCTTCTGGATAAATCCACCTGCATCCGTTTCTTGGAAGCAAATAGTTTTACTCCGAGCGAAAGATATTTTAC
CAGAGCCAGCACTCTTTCGATCATCAAAAGAATGTACCGCAATCTGATTCACATATATCGTAAAGAACAATTTCGGGATA
TGGAAGATATTCTTTCCCGACAGCTCCTGATTTTGGAAAACAAACTCAAAGCTTAG

Upstream 100 bases:

>100_bases
CAGATCTCTCTTTCTGCGTAACTATTAAGGATCGACTACGGCAACAATCGATTGGAACCCTTTTCATTTCATTTTTTCCG
ATGAAAGATTTTATTCCGAA

Downstream 100 bases:

>100_bases
CCCCCTTTCAAGAGTTCTTGCTTGAGCCTGTACCGATATTTTGAATACTGGCTCCACGGGAAGGAGTAGTGAAAGCGTCC
GTACTAAAAGATTCTCTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MTHFVFRKNIFFMSLSDSYHDSFHLPSDKLEGKFYQLEFSGTEEKIRVIREIADMIPWQFEIDEFIEEFKDPTLRIFARS
ISSIVHMERINTRYSLLADKGHVNDYGDLEEAVFLLSSVGDPKASYHEFKIYLDKLALRVEELYDLNPEYVSEELKVHFL
TRVLSSEENFQGNNDQYDDPNNSFVTRIVHTRKGIPISLSTIYLLVAKRLSLPLYGVNMPLHFLLHFDSPDYETFIDPFH
GGVLLDKSTCIRFLEANSFTPSERYFTRASTLSIIKRMYRNLIHIYRKEQFRDMEDILSRQLLILENKLKA

Sequences:

>Translated_311_residues
MTHFVFRKNIFFMSLSDSYHDSFHLPSDKLEGKFYQLEFSGTEEKIRVIREIADMIPWQFEIDEFIEEFKDPTLRIFARS
ISSIVHMERINTRYSLLADKGHVNDYGDLEEAVFLLSSVGDPKASYHEFKIYLDKLALRVEELYDLNPEYVSEELKVHFL
TRVLSSEENFQGNNDQYDDPNNSFVTRIVHTRKGIPISLSTIYLLVAKRLSLPLYGVNMPLHFLLHFDSPDYETFIDPFH
GGVLLDKSTCIRFLEANSFTPSERYFTRASTLSIIKRMYRNLIHIYRKEQFRDMEDILSRQLLILENKLKA
>Mature_310_residues
THFVFRKNIFFMSLSDSYHDSFHLPSDKLEGKFYQLEFSGTEEKIRVIREIADMIPWQFEIDEFIEEFKDPTLRIFARSI
SSIVHMERINTRYSLLADKGHVNDYGDLEEAVFLLSSVGDPKASYHEFKIYLDKLALRVEELYDLNPEYVSEELKVHFLT
RVLSSEENFQGNNDQYDDPNNSFVTRIVHTRKGIPISLSTIYLLVAKRLSLPLYGVNMPLHFLLHFDSPDYETFIDPFHG
GVLLDKSTCIRFLEANSFTPSERYFTRASTLSIIKRMYRNLIHIYRKEQFRDMEDILSRQLLILENKLKA

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36682; Mature: 36551

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHFVFRKNIFFMSLSDSYHDSFHLPSDKLEGKFYQLEFSGTEEKIRVIREIADMIPWQF
CCCEEEECCEEEEEECCCCCCCCCCCCHHHCCEEEEEEECCCHHHHHHHHHHHHHCCCEE
EIDEFIEEFKDPTLRIFARSISSIVHMERINTRYSLLADKGHVNDYGDLEEAVFLLSSVG
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCHHHHHHHHHHCC
DPKASYHEFKIYLDKLALRVEELYDLNPEYVSEELKVHFLTRVLSSEENFQGNNDQYDDP
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NNSFVTRIVHTRKGIPISLSTIYLLVAKRLSLPLYGVNMPLHFLLHFDSPDYETFIDPFH
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCHHHHHCCCC
GGVLLDKSTCIRFLEANSFTPSERYFTRASTLSIIKRMYRNLIHIYRKEQFRDMEDILSR
CCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QLLILENKLKA
HHHHHHHHCCC
>Mature Secondary Structure 
THFVFRKNIFFMSLSDSYHDSFHLPSDKLEGKFYQLEFSGTEEKIRVIREIADMIPWQF
CCEEEECCEEEEEECCCCCCCCCCCCHHHCCEEEEEEECCCHHHHHHHHHHHHHCCCEE
EIDEFIEEFKDPTLRIFARSISSIVHMERINTRYSLLADKGHVNDYGDLEEAVFLLSSVG
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCHHHHHHHHHHCC
DPKASYHEFKIYLDKLALRVEELYDLNPEYVSEELKVHFLTRVLSSEENFQGNNDQYDDP
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NNSFVTRIVHTRKGIPISLSTIYLLVAKRLSLPLYGVNMPLHFLLHFDSPDYETFIDPFH
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCHHHHHCCCC
GGVLLDKSTCIRFLEANSFTPSERYFTRASTLSIIKRMYRNLIHIYRKEQFRDMEDILSR
CCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QLLILENKLKA
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]