| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327256
Identifier: 116327256
GI number: 116327256
Start: 503292
End: 504314
Strand: Reverse
Name: 116327256
Synonym: LBL_0445
Alternate gene names: NA
Gene position: 504314-503292 (Counterclockwise)
Preceding gene: 116327257
Following gene: 116327253
Centisome position: 13.95
GC content: 41.94
Gene sequence:
>1023_bases ATGAAAATTCACCGATATGATTCTATTCCGGAAGTCAAGAACATCGGAGACGGAATCTTTAAGACCGAAATTCCACAACC TTTCTATTCACCCAATAATATTTACATTCTCCCGGACGGGGAACCTACCATCATCGACTCCGGTTACATCGAAAATTTAG GTCTTTTGCAAAGGGCTTTGAAAACGATCGGCCTTTCTTTAAATAAAATCAAACATATTATCTACACCCACAACCATCTT GATCACATGAGCGCCGCTTTGACCCTACGCTATTATACGGATGCAAAGTTGTACGCGATGACGGGAATGGCTTCGGAAAT CGGAAATTATGTGGAATTCGTTCAAGTTTTTCAAAGAGCCATGAGGAGGCTCGTATATAAAGGTCATCACGATAATACAA CAAGAGCCACAGAACTGAAAAGAGTGGATACCGGTATATTCGAATTTCATGATGCTTTGGACAATTCGGAAAAAGTAGAC CCGTATTTGGATTTCGACGTGGAACTCGTGGAAGGAGACGTGATTAAAGCGGGAGGCAGAGAAATCGGAGTCCTGCATAC TCCCGGTCATAATCGATGGCATTTAACTCCTTATATCTTAGGAGAAAAGATTTACTTTACGGGCGATTTGGTACTTCAAA ATATTTCTTCTATTTACGCGGAGATCGACGGAAATCTTTACGACTATCATCAATCCTTGAACCGTCTTTCCAAGCTTCCG ATCCGAAGATTACTTCCGGCACACGGGCCGGAGCCGGACGATCCTCAAAGAGCGATTAAGTTGATTTCGAAAACTCTAAA TCTTTTGGAAAGAGGTGTGGTACGTAGATTGAAGGAAGACGATCAGGATCTCTCCACTTTGGTTCTCGAAGCAATGGGAG AAAAGGTGGCGAACAGTAGTTATTACAATACGGCACTTGCAATCTTACATTCTTTGATTCGAAAATTGATTGATCAAGGG CAGGTACAAGTTTTGGAGATCGATCCTCCGTATGAAAAATACAAATGGATCGGTGCGAAATAA
Upstream 100 bases:
>100_bases TTGGGTTAAGGTAGGCTCTTATTTGAAATTTCAATTGCAGACCTTCATGTCTCCAAAGAACTTGTATCAAAGAAGGATCC CTATACTTGGGGAAAATTGA
Downstream 100 bases:
>100_bases ACGCGTAATATAATTAACGCGAATTCGATATAGGGAAGCTTGGGTAAATCGCTCACAAATTTCACAACTAAAATGGCTCG CGAGCTGAAACGCTTTCATA
Product: Zn-dependent hydrolase
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein; Hydrolase Protein; Metallo-Beta-Lactamase Superfamily Protein; Metallo-Beta-Lactamase Family Hydrolase; AMP-Dependent Synthetase And Ligase; Metallo-Beta-Lactamase; Beta-Lactamase-Like; Zn-Dependent Hydrolase
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MKIHRYDSIPEVKNIGDGIFKTEIPQPFYSPNNIYILPDGEPTIIDSGYIENLGLLQRALKTIGLSLNKIKHIIYTHNHL DHMSAALTLRYYTDAKLYAMTGMASEIGNYVEFVQVFQRAMRRLVYKGHHDNTTRATELKRVDTGIFEFHDALDNSEKVD PYLDFDVELVEGDVIKAGGREIGVLHTPGHNRWHLTPYILGEKIYFTGDLVLQNISSIYAEIDGNLYDYHQSLNRLSKLP IRRLLPAHGPEPDDPQRAIKLISKTLNLLERGVVRRLKEDDQDLSTLVLEAMGEKVANSSYYNTALAILHSLIRKLIDQG QVQVLEIDPPYEKYKWIGAK
Sequences:
>Translated_340_residues MKIHRYDSIPEVKNIGDGIFKTEIPQPFYSPNNIYILPDGEPTIIDSGYIENLGLLQRALKTIGLSLNKIKHIIYTHNHL DHMSAALTLRYYTDAKLYAMTGMASEIGNYVEFVQVFQRAMRRLVYKGHHDNTTRATELKRVDTGIFEFHDALDNSEKVD PYLDFDVELVEGDVIKAGGREIGVLHTPGHNRWHLTPYILGEKIYFTGDLVLQNISSIYAEIDGNLYDYHQSLNRLSKLP IRRLLPAHGPEPDDPQRAIKLISKTLNLLERGVVRRLKEDDQDLSTLVLEAMGEKVANSSYYNTALAILHSLIRKLIDQG QVQVLEIDPPYEKYKWIGAK >Mature_340_residues MKIHRYDSIPEVKNIGDGIFKTEIPQPFYSPNNIYILPDGEPTIIDSGYIENLGLLQRALKTIGLSLNKIKHIIYTHNHL DHMSAALTLRYYTDAKLYAMTGMASEIGNYVEFVQVFQRAMRRLVYKGHHDNTTRATELKRVDTGIFEFHDALDNSEKVD PYLDFDVELVEGDVIKAGGREIGVLHTPGHNRWHLTPYILGEKIYFTGDLVLQNISSIYAEIDGNLYDYHQSLNRLSKLP IRRLLPAHGPEPDDPQRAIKLISKTLNLLERGVVRRLKEDDQDLSTLVLEAMGEKVANSSYYNTALAILHSLIRKLIDQG QVQVLEIDPPYEKYKWIGAK
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17537503, Length=321, Percent_Identity=24.6105919003115, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193205216, Length=321, Percent_Identity=24.6105919003115, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38827; Mature: 38827
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIHRYDSIPEVKNIGDGIFKTEIPQPFYSPNNIYILPDGEPTIIDSGYIENLGLLQRAL CCCCCCCCCCHHHHCCCCCEECCCCCCCCCCCEEEEEECCCCCEECCCHHHHHHHHHHHH KTIGLSLNKIKHIIYTHNHLDHMSAALTLRYYTDAKLYAMTGMASEIGNYVEFVQVFQRA HHHCCCHHHHHHHHHCCCHHHHHHHHEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHH MRRLVYKGHHDNTTRATELKRVDTGIFEFHDALDNSEKVDPYLDFDVELVEGDVIKAGGR HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEECCCC EIGVLHTPGHNRWHLTPYILGEKIYFTGDLVLQNISSIYAEIDGNLYDYHQSLNRLSKLP EEEEEECCCCCCEEEEHEEECCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC IRRLLPAHGPEPDDPQRAIKLISKTLNLLERGVVRRLKEDDQDLSTLVLEAMGEKVANSS HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCH YYNTALAILHSLIRKLIDQGQVQVLEIDPPYEKYKWIGAK HHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHCEECCCC >Mature Secondary Structure MKIHRYDSIPEVKNIGDGIFKTEIPQPFYSPNNIYILPDGEPTIIDSGYIENLGLLQRAL CCCCCCCCCCHHHHCCCCCEECCCCCCCCCCCEEEEEECCCCCEECCCHHHHHHHHHHHH KTIGLSLNKIKHIIYTHNHLDHMSAALTLRYYTDAKLYAMTGMASEIGNYVEFVQVFQRA HHHCCCHHHHHHHHHCCCHHHHHHHHEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHH MRRLVYKGHHDNTTRATELKRVDTGIFEFHDALDNSEKVDPYLDFDVELVEGDVIKAGGR HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEECCCC EIGVLHTPGHNRWHLTPYILGEKIYFTGDLVLQNISSIYAEIDGNLYDYHQSLNRLSKLP EEEEEECCCCCCEEEEHEEECCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC IRRLLPAHGPEPDDPQRAIKLISKTLNLLERGVVRRLKEDDQDLSTLVLEAMGEKVANSS HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCH YYNTALAILHSLIRKLIDQGQVQVLEIDPPYEKYKWIGAK HHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA